RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HOXA10P31260 410 aaPredicted RBP25.03■■□□□ 1.6
CTSD-206ENST00000497544 CRAMP1Q96RY5 1269 aa25.03■■□□□ 1.6
CTSD-206ENST00000497544 ZBTB40Q9NUA8 1239 aa25.03■■□□□ 1.6
CTSD-206ENST00000497544 DICER1Q9UPY3 1922 aaKnown RBP25.03■■□□□ 1.6
CTSD-206ENST00000497544 IRX6P78412 446 aaPredicted RBP25.02■■□□□ 1.6
CTSD-206ENST00000497544 RABL6Q3YEC7 729 aaPredicted RBP25.02■■□□□ 1.6
CTSD-206ENST00000497544 GREM2Q9H772 168 aa25.02■■□□□ 1.6
CTSD-206ENST00000497544 C1orf115Q9H7X2 142 aa25.02■■□□□ 1.6
CTSD-206ENST00000497544 IFIT5Q13325 482 aaKnown RBP25.01■■□□□ 1.59
CTSD-206ENST00000497544 CCDC57Q2TAC2 916 aa25.01■■□□□ 1.59
CTSD-206ENST00000497544 TTLL6Q8N841 843 aa25.01■■□□□ 1.59
CTSD-206ENST00000497544 ANKRD44Q8N8A2 993 aa25.01■■□□□ 1.59
CTSD-206ENST00000497544 SEC31BQ9NQW1 1179 aa25.01■■□□□ 1.59
CTSD-206ENST00000497544 ANKRD18BA2A2Z9 1011 aa25■■□□□ 1.59
CTSD-206ENST00000497544 ITGA6P23229 1130 aa25■■□□□ 1.59
CTSD-206ENST00000497544 CDC5LQ99459 802 aaKnown RBP25■■□□□ 1.59
CTSD-206ENST00000497544 GRAPQ13588 217 aa24.99■■□□□ 1.59
CTSD-206ENST00000497544 GRAPLQ8TC17 118 aaPredicted RBP24.99■■□□□ 1.59
CTSD-206ENST00000497544 PASKQ96RG2 1323 aa24.99■■□□□ 1.59
CTSD-206ENST00000497544 COL11A2P13942 1736 aaPredicted RBP24.98■■□□□ 1.59
CTSD-206ENST00000497544 RTL9Q8NET4 1388 aa24.98■■□□□ 1.59
CTSD-206ENST00000497544 BBOX1O75936 387 aa24.98■■□□□ 1.59
CTSD-206ENST00000497544 RPS8P62241 208 aaKnown RBP24.98■■□□□ 1.59
CTSD-206ENST00000497544 TAF7LQ5H9L4 462 aa24.98■■□□□ 1.59
CTSD-206ENST00000497544 ANKRD18AQ8IVF6 992 aa24.98■■□□□ 1.59
CTSD-206ENST00000497544 PDE4DIPQ5VU43 2346 aa24.97■■□□□ 1.59
CTSD-206ENST00000497544 ATP8B2P98198 1209 aa24.97■■□□□ 1.59
CTSD-206ENST00000497544 EXOC6Q8TAG9 804 aa24.97■■□□□ 1.59
CTSD-206ENST00000497544 CELF1Q92879 486 aaKnown RBP24.97■■□□□ 1.59
CTSD-206ENST00000497544 TAF1P21675 1872 aa24.96■■□□□ 1.59
CTSD-206ENST00000497544 NEFLP07196 543 aa24.96■■□□□ 1.59
CTSD-206ENST00000497544 IGHMBP2P38935 993 aaKnown RBP24.96■■□□□ 1.59
CTSD-206ENST00000497544 AAMPQ13685 434 aa24.96■■□□□ 1.59
CTSD-206ENST00000497544 NFKBIEO00221 500 aa24.95■■□□□ 1.58
CTSD-206ENST00000497544 SRGAP3O43295 1099 aa24.95■■□□□ 1.58
CTSD-206ENST00000497544 MTX1Q13505 466 aa24.95■■□□□ 1.58
CTSD-206ENST00000497544 DPY19L2Q6NUT2 758 aa24.95■■□□□ 1.58
CTSD-206ENST00000497544 PRPF40BQ6NWY9 871 aaKnown RBP24.95■■□□□ 1.58
CTSD-206ENST00000497544 RPAP2Q8IXW5 612 aaPredicted RBP24.95■■□□□ 1.58
CTSD-206ENST00000497544 TMX4Q9H1E5 349 aaPredicted RBP24.95■■□□□ 1.58
CTSD-206ENST00000497544 MPHOSPH8Q99549 860 aa24.94■■□□□ 1.58
CTSD-206ENST00000497544 ZNF219Q9P2Y4 722 aaPredicted RBP24.94■■□□□ 1.58
CTSD-206ENST00000497544 CACNA1SQ13698 1873 aa24.94■■□□□ 1.58
CTSD-206ENST00000497544 PPEF1O14829 653 aaPredicted RBP24.93■■□□□ 1.58
CTSD-206ENST00000497544 CEP85Q6P2H3 762 aa24.93■■□□□ 1.58
CTSD-206ENST00000497544 TMC4Q7Z404 712 aa24.93■■□□□ 1.58
CTSD-206ENST00000497544 ZNF594Q96JF6 807 aaPredicted RBP24.93■■□□□ 1.58
CTSD-206ENST00000497544 SLX4Q8IY92 1834 aa24.93■■□□□ 1.58
CTSD-206ENST00000497544 PNMA6EA0A0J9YXQ4 647 aa24.91■■□□□ 1.58
CTSD-206ENST00000497544 TMEM88BA6NKF7 163 aa24.91■■□□□ 1.58
CTSD-206ENST00000497544 LDHAL6AQ6ZMR3 332 aa24.91■■□□□ 1.58
CTSD-206ENST00000497544 BSDC1Q9NW68 430 aaPredicted RBP24.91■■□□□ 1.58
CTSD-206ENST00000497544 FER1L6Q2WGJ9 1857 aa24.9■■□□□ 1.58
CTSD-206ENST00000497544 C21orf2O43822 256 aa24.9■■□□□ 1.58
CTSD-206ENST00000497544 HMMRO75330 724 aa24.9■■□□□ 1.58
CTSD-206ENST00000497544 RFX5P48382 616 aaPredicted RBP24.9■■□□□ 1.58
CTSD-206ENST00000497544 SP8Q8IXZ3 490 aa24.9■■□□□ 1.58
CTSD-206ENST00000497544 CNNM1Q9NRU3 951 aa24.9■■□□□ 1.58
CTSD-206ENST00000497544 ATP6V0A2Q9Y487 856 aa24.9■■□□□ 1.58
CTSD-206ENST00000497544 PTPN12Q05209 780 aaKnown RBP24.89■■□□□ 1.58
CTSD-206ENST00000497544 KLHDC4Q8TBB5 520 aa24.89■■□□□ 1.58
CTSD-206ENST00000497544 THSD7BQ9C0I4 1608 aa24.88■■□□□ 1.57
CTSD-206ENST00000497544 POLA2Q14181 598 aa24.88■■□□□ 1.57
CTSD-206ENST00000497544 CC2D2BQ6DHV5 1058 aa24.88■■□□□ 1.57
CTSD-206ENST00000497544 SSH3Q8TE77 659 aa24.88■■□□□ 1.57
CTSD-206ENST00000497544 SCN4AP35499 1836 aa24.87■■□□□ 1.57
CTSD-206ENST00000497544 MAP2K1Q02750 393 aaPredicted RBP24.87■■□□□ 1.57
CTSD-206ENST00000497544 SOGA3Q5TF21 947 aa24.87■■□□□ 1.57
CTSD-206ENST00000497544 C7orf43Q8WVR3 580 aa24.87■■□□□ 1.57
CTSD-206ENST00000497544 COPRSQ9NQ92 184 aa24.87■■□□□ 1.57
CTSD-206ENST00000497544 PA2G4Q9UQ80 394 aaKnown RBP24.87■■□□□ 1.57
CTSD-206ENST00000497544 PCDHB15Q9Y5E8 787 aa24.87■■□□□ 1.57
CTSD-206ENST00000497544 SPEF2Q9C093 1822 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 RASSF10A6NK89 507 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 EYA2O00167 538 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 ITGBL1O95965 494 aaPredicted RBP24.85■■□□□ 1.57
CTSD-206ENST00000497544 LDHDQ86WU2 507 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 SIRT2Q8IXJ6 389 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 PUS3Q9BZE2 481 aaKnown RBP24.85■■□□□ 1.57
CTSD-206ENST00000497544 SIL1Q9H173 461 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 FBXO3Q9UK99 471 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 MINPP1Q9UNW1 487 aa24.85■■□□□ 1.57
CTSD-206ENST00000497544 DDNO94850 711 aaPredicted RBP24.84■■□□□ 1.57
CTSD-206ENST00000497544 G3BP1Q13283 466 aaKnown RBP eCLIP24.84■■□□□ 1.57
CTSD-206ENST00000497544 GRIPAP1Q4V328 841 aa24.84■■□□□ 1.57
CTSD-206ENST00000497544 LRRC24Q50LG9 513 aa24.84■■□□□ 1.57
CTSD-206ENST00000497544 CCDC93Q567U6 631 aa24.84■■□□□ 1.57
CTSD-206ENST00000497544 COL4A1P02462 1669 aa24.84■■□□□ 1.57
CTSD-206ENST00000497544 WDR33Q9C0J8 1336 aaKnown RBP24.84■■□□□ 1.57
CTSD-206ENST00000497544 SURF6O75683 361 aaKnown RBP24.83■■□□□ 1.57
CTSD-206ENST00000497544 DEFB115Q30KQ5 88 aa24.83■■□□□ 1.57
CTSD-206ENST00000497544 OLFM4Q6UX06 510 aa24.83■■□□□ 1.57
CTSD-206ENST00000497544 RTKN2Q8IZC4 609 aa24.83■■□□□ 1.57
CTSD-206ENST00000497544 MPNDQ8N594 471 aa24.83■■□□□ 1.57
CTSD-206ENST00000497544 ANKIB1Q9P2G1 1089 aa24.83■■□□□ 1.57
CTSD-206ENST00000497544 NSFL1CQ9UNZ2 370 aaKnown RBP24.83■■□□□ 1.57
CTSD-206ENST00000497544 RIPOR2Q9Y4F9 1068 aa24.83■■□□□ 1.57
CTSD-206ENST00000497544 ANKRD2Q9GZV1 360 aa24.82■■□□□ 1.56
CTSD-206ENST00000497544 ADAMTSL1Q8N6G6 1762 aa24.82■■□□□ 1.56
CTSD-206ENST00000497544 CIAO1O76071 339 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms