RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 TRPM4Q8TD43 1214 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 CNOT7Q9UIV1 285 aaKnown RBP16.61■□□□□ 0.25
FN1-226ENST00000496542 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
FN1-226ENST00000496542 SPEF2Q9C093 1822 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 CACNA1FO60840 1977 aa16.6■□□□□ 0.25
FN1-226ENST00000496542 SCN9AQ15858 1988 aa16.6■□□□□ 0.25
FN1-226ENST00000496542 H7C1D1 291 aa16.6■□□□□ 0.25
FN1-226ENST00000496542 CTSWP56202 376 aa16.6■□□□□ 0.25
FN1-226ENST00000496542 CWF19L2Q2TBE0 894 aaKnown RBP16.6■□□□□ 0.25
FN1-226ENST00000496542 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
FN1-226ENST00000496542 PAXIP1Q6ZW49 1069 aaPredicted RBP16.6■□□□□ 0.25
FN1-226ENST00000496542 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
FN1-226ENST00000496542 GGA1Q9UJY5 639 aa16.6■□□□□ 0.25
FN1-226ENST00000496542 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
FN1-226ENST00000496542 HIRAP54198 1017 aaPredicted RBP16.59■□□□□ 0.25
FN1-226ENST00000496542 AIDAQ96BJ3 306 aa16.59■□□□□ 0.25
FN1-226ENST00000496542 GLIS2Q9BZE0 524 aaPredicted RBP16.59■□□□□ 0.25
FN1-226ENST00000496542 ZC3H12CQ9C0D7 883 aaKnown RBP16.59■□□□□ 0.25
FN1-226ENST00000496542 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
FN1-226ENST00000496542 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
FN1-226ENST00000496542 RTL9Q8NET4 1388 aa16.59■□□□□ 0.25
FN1-226ENST00000496542 G3V3G9 751 aa16.58■□□□□ 0.24
FN1-226ENST00000496542 FOXN1O15353 648 aa16.58■□□□□ 0.24
FN1-226ENST00000496542 FLIIQ13045 1269 aa16.58■□□□□ 0.24
FN1-226ENST00000496542 DCAF8Q5TAQ9 597 aa16.58■□□□□ 0.24
FN1-226ENST00000496542 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.24
FN1-226ENST00000496542 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.24
FN1-226ENST00000496542 XDHP47989 1333 aa16.57■□□□□ 0.24
FN1-226ENST00000496542 CELF2O95319 508 aaKnown RBP16.57■□□□□ 0.24
FN1-226ENST00000496542 GRM1Q13255 1194 aa16.57■□□□□ 0.24
FN1-226ENST00000496542 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
FN1-226ENST00000496542 CST9Q5W186 159 aa16.57■□□□□ 0.24
FN1-226ENST00000496542 WDR63Q8IWG1 891 aa16.57■□□□□ 0.24
FN1-226ENST00000496542 ZC3H15Q8WU90 426 aaKnown RBP16.57■□□□□ 0.24
FN1-226ENST00000496542 DPF2Q92785 391 aa16.57■□□□□ 0.24
FN1-226ENST00000496542 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
FN1-226ENST00000496542 RPS12P25398 132 aaKnown RBP16.56■□□□□ 0.24
FN1-226ENST00000496542 EXOSC9Q06265 439 aaKnown RBP16.56■□□□□ 0.24
FN1-226ENST00000496542 TBC1D10BQ4KMP7 808 aaPredicted RBP16.56■□□□□ 0.24
FN1-226ENST00000496542 SAMD7Q7Z3H4 446 aa16.56■□□□□ 0.24
FN1-226ENST00000496542 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
FN1-226ENST00000496542 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
FN1-226ENST00000496542 CAPNS2Q96L46 248 aa16.56■□□□□ 0.24
FN1-226ENST00000496542 GREM2Q9H772 168 aa16.56■□□□□ 0.24
FN1-226ENST00000496542 ZNF408Q9H9D4 720 aa16.56■□□□□ 0.24
FN1-226ENST00000496542 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
FN1-226ENST00000496542 POLR2AP24928 1970 aaKnown RBP16.56■□□□□ 0.24
FN1-226ENST00000496542 VAMP4O75379 141 aa16.55■□□□□ 0.24
FN1-226ENST00000496542 CAPN15O75808 1086 aa16.55■□□□□ 0.24
FN1-226ENST00000496542 GCKRQ14397 625 aa16.55■□□□□ 0.24
FN1-226ENST00000496542 CYP4F22Q6NT55 531 aa16.55■□□□□ 0.24
FN1-226ENST00000496542 DNAAF4Q8WXU2 420 aa16.55■□□□□ 0.24
FN1-226ENST00000496542 WBP1LQ9NX94 342 aa16.55■□□□□ 0.24
FN1-226ENST00000496542 TLL2Q9Y6L7 1015 aa16.55■□□□□ 0.24
FN1-226ENST00000496542 PSME4Q14997 1843 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 H7C1W4 665 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 EGFRP00533 1210 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 ATP2B4P23634 1241 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 ECE1P42892 770 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 CTCFP49711 727 aaPredicted RBP16.54■□□□□ 0.24
FN1-226ENST00000496542 RBM26Q5T8P6 1007 aaKnown RBP16.54■□□□□ 0.24
FN1-226ENST00000496542 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 THSD7BQ9C0I4 1608 aa16.54■□□□□ 0.24
FN1-226ENST00000496542 USP48Q86UV5 1035 aa16.53■□□□□ 0.24
FN1-226ENST00000496542 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
FN1-226ENST00000496542 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
FN1-226ENST00000496542 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.24
FN1-226ENST00000496542 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.24
FN1-226ENST00000496542 KIF4BQ2VIQ3 1234 aa16.52■□□□□ 0.24
FN1-226ENST00000496542 FAM161AQ3B820 660 aa16.52■□□□□ 0.24
FN1-226ENST00000496542 LINS1Q8NG48 757 aa16.52■□□□□ 0.24
FN1-226ENST00000496542 MINPP1Q9UNW1 487 aa16.52■□□□□ 0.24
FN1-226ENST00000496542 WTIPA6NIX2 430 aaPredicted RBP16.51■□□□□ 0.23
FN1-226ENST00000496542 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
FN1-226ENST00000496542 CASP7P55210 303 aa16.51■□□□□ 0.23
FN1-226ENST00000496542 DLK2Q6UY11 383 aa16.51■□□□□ 0.23
FN1-226ENST00000496542 KRT26Q7Z3Y9 468 aa16.51■□□□□ 0.23
FN1-226ENST00000496542 SAPCD2Q86UD0 394 aa16.51■□□□□ 0.23
FN1-226ENST00000496542 PLA2G12BQ9BX93 195 aa16.51■□□□□ 0.23
FN1-226ENST00000496542 F6X3S4 739 aa16.5■□□□□ 0.23
FN1-226ENST00000496542 ITGA6P23229 1130 aa16.5■□□□□ 0.23
FN1-226ENST00000496542 LBX1P52954 281 aa16.5■□□□□ 0.23
FN1-226ENST00000496542 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
FN1-226ENST00000496542 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
FN1-226ENST00000496542 DCPSQ96C86 337 aaKnown RBP16.5■□□□□ 0.23
FN1-226ENST00000496542 PRDM10Q9NQV6 1147 aa16.5■□□□□ 0.23
FN1-226ENST00000496542 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
FN1-226ENST00000496542 ADM5C9JUS6 153 aa16.49■□□□□ 0.23
FN1-226ENST00000496542 AOC2O75106 756 aa16.49■□□□□ 0.23
FN1-226ENST00000496542 CCT4P50991 539 aaKnown RBP16.49■□□□□ 0.23
FN1-226ENST00000496542 AGBL3Q8NEM8 1001 aa16.49■□□□□ 0.23
FN1-226ENST00000496542 GGA3Q9NZ52 723 aa16.49■□□□□ 0.23
FN1-226ENST00000496542 ASTN2O75129 1339 aaPredicted RBP16.48■□□□□ 0.23
FN1-226ENST00000496542 ZNF609O15014 1411 aa16.48■□□□□ 0.23
FN1-226ENST00000496542 USP17L3A6NCW0 530 aa16.48■□□□□ 0.23
FN1-226ENST00000496542 USP17L4A6NCW7 530 aa16.48■□□□□ 0.23
FN1-226ENST00000496542 HSPA8P11142 646 aaKnown RBP16.48■□□□□ 0.23
FN1-226ENST00000496542 USP17L1Q7RTZ2 530 aa16.48■□□□□ 0.23
FN1-226ENST00000496542 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms