RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 GGA1Q9UJY5 639 aa28.58■■■□□ 2.17
CHRD-217ENST00000496527 MINPP1Q9UNW1 487 aa28.58■■■□□ 2.17
CHRD-217ENST00000496527 XDHP47989 1333 aa28.58■■■□□ 2.17
CHRD-217ENST00000496527 UFL1O94874 794 aa28.57■■■□□ 2.16
CHRD-217ENST00000496527 INTS3Q68E01 1043 aaKnown RBP28.57■■■□□ 2.16
CHRD-217ENST00000496527 BICC1Q9H694 974 aaKnown RBP28.57■■■□□ 2.16
CHRD-217ENST00000496527 ZNF541Q9H0D2 1346 aa28.57■■■□□ 2.16
CHRD-217ENST00000496527 DUOX1Q9NRD9 1551 aa28.57■■■□□ 2.16
CHRD-217ENST00000496527 COL4A5P29400 1685 aa28.56■■■□□ 2.16
CHRD-217ENST00000496527 TAF7LQ5H9L4 462 aa28.56■■■□□ 2.16
CHRD-217ENST00000496527 RIMBP2O15034 1052 aa28.55■■■□□ 2.16
CHRD-217ENST00000496527 UBTFL1P0CB47 393 aaPredicted RBP28.55■■■□□ 2.16
CHRD-217ENST00000496527 CLUAP1Q96AJ1 413 aa28.55■■■□□ 2.16
CHRD-217ENST00000496527 VEGFAP15692 232 aaPredicted RBP28.54■■■□□ 2.16
CHRD-217ENST00000496527 ATP2B4P23634 1241 aa28.54■■■□□ 2.16
CHRD-217ENST00000496527 RABL6Q3YEC7 729 aaPredicted RBP28.54■■■□□ 2.16
CHRD-217ENST00000496527 ZNRF3Q9ULT6 936 aa28.54■■■□□ 2.16
CHRD-217ENST00000496527 C16orf71Q8IYS4 520 aaPredicted RBP28.53■■■□□ 2.16
CHRD-217ENST00000496527 ANKRD44Q8N8A2 993 aa28.53■■■□□ 2.16
CHRD-217ENST00000496527 ZC3H12CQ9C0D7 883 aaKnown RBP28.53■■■□□ 2.16
CHRD-217ENST00000496527 ANKRD2Q9GZV1 360 aa28.53■■■□□ 2.16
CHRD-217ENST00000496527 HDAC5Q9UQL6 1122 aa28.53■■■□□ 2.16
CHRD-217ENST00000496527 TNNQ9UQP3 1299 aa28.53■■■□□ 2.16
CHRD-217ENST00000496527 SPEF2Q9C093 1822 aa28.53■■■□□ 2.16
CHRD-217ENST00000496527 LTBP1Q14766 1721 aa28.52■■■□□ 2.16
CHRD-217ENST00000496527 GPC2Q8N158 579 aa28.52■■■□□ 2.16
CHRD-217ENST00000496527 ZNF594Q96JF6 807 aaPredicted RBP28.52■■■□□ 2.16
CHRD-217ENST00000496527 GPR101Q96P66 508 aaPredicted RBP28.52■■■□□ 2.16
CHRD-217ENST00000496527 GJA3Q9Y6H8 435 aa28.51■■■□□ 2.15
CHRD-217ENST00000496527 WDR90Q96KV7 1748 aa28.5■■■□□ 2.15
CHRD-217ENST00000496527 LDHAL6AQ6ZMR3 332 aa28.5■■■□□ 2.15
CHRD-217ENST00000496527 G3V3G9 751 aa28.49■■■□□ 2.15
CHRD-217ENST00000496527 CHRNDQ07001 517 aa28.49■■■□□ 2.15
CHRD-217ENST00000496527 DCAF8Q5TAQ9 597 aa28.49■■■□□ 2.15
CHRD-217ENST00000496527 FTSJ3Q8IY81 847 aaKnown RBP28.49■■■□□ 2.15
CHRD-217ENST00000496527 L3MBTL3Q96JM7 780 aaPredicted RBP28.49■■■□□ 2.15
CHRD-217ENST00000496527 MEIS3Q99687 375 aa28.49■■■□□ 2.15
CHRD-217ENST00000496527 DBNDD1Q9H9R9 158 aa28.49■■■□□ 2.15
CHRD-217ENST00000496527 CNNM1Q9NRU3 951 aa28.49■■■□□ 2.15
CHRD-217ENST00000496527 LEMD3Q9Y2U8 911 aa28.49■■■□□ 2.15
CHRD-217ENST00000496527 POTECB2RU33 542 aa28.48■■■□□ 2.15
CHRD-217ENST00000496527 GNAI3P08754 354 aa28.48■■■□□ 2.15
CHRD-217ENST00000496527 C1QTNF8P60827 252 aa28.48■■■□□ 2.15
CHRD-217ENST00000496527 YTHDC1Q96MU7 727 aaKnown RBP28.48■■■□□ 2.15
CHRD-217ENST00000496527 IQCA1LA6NCM1 817 aa28.47■■■□□ 2.15
CHRD-217ENST00000496527 TOMM70O94826 608 aa28.47■■■□□ 2.15
CHRD-217ENST00000496527 CXCL9Q07325 125 aa28.47■■■□□ 2.15
CHRD-217ENST00000496527 DOK7Q18PE1 504 aa28.47■■■□□ 2.15
CHRD-217ENST00000496527 DZIP1LQ8IYY4 767 aaKnown RBP28.47■■■□□ 2.15
CHRD-217ENST00000496527 TMEM57Q8N5G2 664 aa28.47■■■□□ 2.15
CHRD-217ENST00000496527 RCAN3Q9UKA8 241 aa28.47■■■□□ 2.15
CHRD-217ENST00000496527 ECE2O60344 883 aa28.46■■■□□ 2.15
CHRD-217ENST00000496527 KCNJ4P48050 445 aa28.46■■■□□ 2.15
CHRD-217ENST00000496527 CIAPIN1Q6FI81 312 aa28.46■■■□□ 2.15
CHRD-217ENST00000496527 LRRFIP2Q9Y608 721 aaKnown RBP28.46■■■□□ 2.15
CHRD-217ENST00000496527 WTIPA6NIX2 430 aaPredicted RBP28.45■■■□□ 2.14
CHRD-217ENST00000496527 YDJCA8MPS7 323 aa28.45■■■□□ 2.14
CHRD-217ENST00000496527 RAD17O75943 681 aa28.45■■■□□ 2.14
CHRD-217ENST00000496527 TNIP1Q15025 636 aa28.45■■■□□ 2.14
CHRD-217ENST00000496527 ZNF804BA4D1E1 1349 aa28.44■■■□□ 2.14
CHRD-217ENST00000496527 HELBQ8NG08 1087 aaPredicted RBP28.44■■■□□ 2.14
CHRD-217ENST00000496527 MED23Q9ULK4 1368 aa28.43■■■□□ 2.14
CHRD-217ENST00000496527 TAF5LO75529 589 aa28.43■■■□□ 2.14
CHRD-217ENST00000496527 HACL1Q9UJ83 578 aa28.43■■■□□ 2.14
CHRD-217ENST00000496527 PLIN1O60240 522 aa28.42■■■□□ 2.14
CHRD-217ENST00000496527 LMOD1P29536 600 aaPredicted RBP28.42■■■□□ 2.14
CHRD-217ENST00000496527 RBM46Q8TBY0 533 aaKnown RBP28.42■■■□□ 2.14
CHRD-217ENST00000496527 PUS3Q9BZE2 481 aaKnown RBP28.42■■■□□ 2.14
CHRD-217ENST00000496527 ITPRIPQ8IWB1 547 aa28.4■■■□□ 2.14
CHRD-217ENST00000496527 TAF1DQ9H5J8 278 aaPredicted RBP28.4■■■□□ 2.14
CHRD-217ENST00000496527 RIPOR2Q9Y4F9 1068 aa28.4■■■□□ 2.14
CHRD-217ENST00000496527 MS4A1P11836 297 aa28.39■■■□□ 2.14
CHRD-217ENST00000496527 RLBP1P12271 317 aa28.39■■■□□ 2.14
CHRD-217ENST00000496527 KLHDC4Q8TBB5 520 aa28.39■■■□□ 2.14
CHRD-217ENST00000496527 MROH5Q6ZUA9 1318 aa28.39■■■□□ 2.13
CHRD-217ENST00000496527 SCN4AP35499 1836 aa28.39■■■□□ 2.13
CHRD-217ENST00000496527 PSMD14O00487 310 aa28.38■■■□□ 2.13
CHRD-217ENST00000496527 GNAI2P04899 355 aa28.38■■■□□ 2.13
CHRD-217ENST00000496527 EPHX2P34913 555 aa28.38■■■□□ 2.13
CHRD-217ENST00000496527 RFX5P48382 616 aaPredicted RBP28.38■■■□□ 2.13
CHRD-217ENST00000496527 SCNN1DP51172 638 aa28.38■■■□□ 2.13
CHRD-217ENST00000496527 LRRC24Q50LG9 513 aa28.38■■■□□ 2.13
CHRD-217ENST00000496527 PODNQ7Z5L7 613 aa28.38■■■□□ 2.13
CHRD-217ENST00000496527 KCNQ5Q9NR82 932 aa28.38■■■□□ 2.13
CHRD-217ENST00000496527 GMPSP49915 693 aaPredicted RBP28.37■■■□□ 2.13
CHRD-217ENST00000496527 TXNRD3Q86VQ6 643 aa28.37■■■□□ 2.13
CHRD-217ENST00000496527 SNAP23O00161 211 aa28.36■■■□□ 2.13
CHRD-217ENST00000496527 KLRK1P26718 216 aa28.36■■■□□ 2.13
CHRD-217ENST00000496527 PTPN12Q05209 780 aaKnown RBP28.36■■■□□ 2.13
CHRD-217ENST00000496527 SMC1BQ8NDV3 1235 aa28.36■■■□□ 2.13
CHRD-217ENST00000496527 PANK1Q8TE04 598 aa28.36■■■□□ 2.13
CHRD-217ENST00000496527 COA1Q9GZY4 146 aa28.36■■■□□ 2.13
CHRD-217ENST00000496527 FSTL1Q12841 308 aa28.35■■■□□ 2.13
CHRD-217ENST00000496527 METTL24Q5JXM2 366 aa28.35■■■□□ 2.13
CHRD-217ENST00000496527 PNMA8AQ86V59 439 aaPredicted RBP28.35■■■□□ 2.13
CHRD-217ENST00000496527 GPRC5DQ9NZD1 345 aa28.35■■■□□ 2.13
CHRD-217ENST00000496527 EYA2O00167 538 aa28.34■■■□□ 2.13
CHRD-217ENST00000496527 EPS15P42566 896 aa28.34■■■□□ 2.13
CHRD-217ENST00000496527 UBE4AQ14139 1066 aa28.34■■■□□ 2.13
CHRD-217ENST00000496527 EAPPQ56P03 285 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms