RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 IFFO2Q5TF58 517 aa15.39■□□□□ 0.05
PTPN7-217ENST00000495688 IFNL2Q8IZJ0 200 aa15.39■□□□□ 0.05
PTPN7-217ENST00000495688 ZNF710Q8N1W2 664 aa15.39■□□□□ 0.05
PTPN7-217ENST00000495688 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.05
PTPN7-217ENST00000495688 HAUS7Q99871 368 aa15.39■□□□□ 0.05
PTPN7-217ENST00000495688 DNAJC25Q9H1X3 360 aa15.39■□□□□ 0.05
PTPN7-217ENST00000495688 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
PTPN7-217ENST00000495688 FGD1P98174 961 aa15.38■□□□□ 0.05
PTPN7-217ENST00000495688 LRMPQ12912 555 aa15.38■□□□□ 0.05
PTPN7-217ENST00000495688 PRIMPOLQ96LW4 560 aa15.38■□□□□ 0.05
PTPN7-217ENST00000495688 CLSTN2Q9H4D0 955 aa15.38■□□□□ 0.05
PTPN7-217ENST00000495688 GOLIM4O00461 696 aa15.38■□□□□ 0.05
PTPN7-217ENST00000495688 PROSER2Q86WR7 435 aaPredicted RBP15.38■□□□□ 0.05
PTPN7-217ENST00000495688 MAP7D2Q96T17 732 aa15.38■□□□□ 0.05
PTPN7-217ENST00000495688 AFDNP55196 1824 aaKnown RBP15.37■□□□□ 0.05
PTPN7-217ENST00000495688 PDIA4P13667 645 aaKnown RBP15.37■□□□□ 0.05
PTPN7-217ENST00000495688 CASP7P55210 303 aa15.37■□□□□ 0.05
PTPN7-217ENST00000495688 CCDC186Q7Z3E2 898 aa15.37■□□□□ 0.05
PTPN7-217ENST00000495688 DDX19AQ9NUU7 478 aaKnown RBP15.37■□□□□ 0.05
PTPN7-217ENST00000495688 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
PTPN7-217ENST00000495688 CCT2P78371 535 aaKnown RBP15.37■□□□□ 0.05
PTPN7-217ENST00000495688 APOBRQ0VD83 1088 aa15.37■□□□□ 0.05
PTPN7-217ENST00000495688 CHST3Q7LGC8 479 aa15.37■□□□□ 0.05
PTPN7-217ENST00000495688 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
PTPN7-217ENST00000495688 A0A087WWV3 80 aa15.36■□□□□ 0.05
PTPN7-217ENST00000495688 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-217ENST00000495688 HMGN5P82970 282 aaKnown RBP15.36■□□□□ 0.05
PTPN7-217ENST00000495688 RBM43Q6ZSC3 357 aaKnown RBP15.36■□□□□ 0.05
PTPN7-217ENST00000495688 KBTBD3Q8NAB2 608 aa15.36■□□□□ 0.05
PTPN7-217ENST00000495688 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
PTPN7-217ENST00000495688 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
PTPN7-217ENST00000495688 ZNF165P49910 485 aa15.36■□□□□ 0.05
PTPN7-217ENST00000495688 TRIM5Q9C035 493 aa15.36■□□□□ 0.05
PTPN7-217ENST00000495688 ATG9AQ7Z3C6 839 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 DRC7Q8IY82 874 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 KLHL34Q8N239 644 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 NAP1L2Q9ULW6 460 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-217ENST00000495688 GOLGA6L6A8MZA4 724 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 NBPF26B4DH59 902 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 ADD1P35611 737 aaKnown RBP15.35■□□□□ 0.05
PTPN7-217ENST00000495688 FOXO4P98177 505 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 GUCY1B3Q02153 619 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 NBPF10Q6P3W6 841 aaKnown RBP15.35■□□□□ 0.05
PTPN7-217ENST00000495688 TTLL7Q6ZT98 887 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 NBPF15Q8N660 670 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 NSUN7Q8NE18 718 aaKnown RBP15.35■□□□□ 0.05
PTPN7-217ENST00000495688 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-217ENST00000495688 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 C1orf167Q5SNV9 1468 aa15.35■□□□□ 0.05
PTPN7-217ENST00000495688 ARFGEF2Q9Y6D5 1785 aa15.34■□□□□ 0.05
PTPN7-217ENST00000495688 GTF2F1P35269 517 aaKnown RBP eCLIP15.34■□□□□ 0.05
PTPN7-217ENST00000495688 CABP4P57796 275 aa15.34■□□□□ 0.05
PTPN7-217ENST00000495688 LRRC24Q50LG9 513 aa15.34■□□□□ 0.05
PTPN7-217ENST00000495688 SMARCC2Q8TAQ2 1214 aa15.34■□□□□ 0.05
PTPN7-217ENST00000495688 PAG1Q9NWQ8 432 aa15.34■□□□□ 0.05
PTPN7-217ENST00000495688 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
PTPN7-217ENST00000495688 PTPDC1A2A3K4 754 aa15.33■□□□□ 0.05
PTPN7-217ENST00000495688 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.05
PTPN7-217ENST00000495688 ZNF75DP51815 510 aa15.33■□□□□ 0.05
PTPN7-217ENST00000495688 DHX32Q7L7V1 743 aaKnown RBP15.33■□□□□ 0.05
PTPN7-217ENST00000495688 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.05
PTPN7-217ENST00000495688 LAMA4Q16363 1823 aa15.33■□□□□ 0.04
PTPN7-217ENST00000495688 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.04
PTPN7-217ENST00000495688 PFKFB2O60825 505 aa15.33■□□□□ 0.04
PTPN7-217ENST00000495688 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
PTPN7-217ENST00000495688 PLA2G4DQ86XP0 818 aa15.33■□□□□ 0.04
PTPN7-217ENST00000495688 TDRD7Q8NHU6 1098 aaKnown RBP15.32■□□□□ 0.04
PTPN7-217ENST00000495688 ERCC4Q92889 916 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-217ENST00000495688 GOLPH3LQ9H4A5 285 aa15.32■□□□□ 0.04
PTPN7-217ENST00000495688 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
PTPN7-217ENST00000495688 C11orf57Q6ZUT1 292 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-217ENST00000495688 USP28Q96RU2 1077 aa15.32■□□□□ 0.04
PTPN7-217ENST00000495688 ZSCAN16Q9H4T2 348 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-217ENST00000495688 BCL2L12Q9HB09 334 aa15.32■□□□□ 0.04
PTPN7-217ENST00000495688 GPHNQ9NQX3 736 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-217ENST00000495688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPN7-217ENST00000495688 E7EWF7 191 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 TPM3P06753 285 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 HSPD1P10809 573 aaKnown RBP15.31■□□□□ 0.04
PTPN7-217ENST00000495688 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 MTERF4Q7Z6M4 381 aaKnown RBP15.31■□□□□ 0.04
PTPN7-217ENST00000495688 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 ZBTB3Q9H5J0 574 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 H7C1W4 665 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 A1BGP04217 495 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 CCAR1Q8IX12 1150 aaKnown RBP15.31■□□□□ 0.04
PTPN7-217ENST00000495688 C16orf45Q96MC5 204 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-217ENST00000495688 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
PTPN7-217ENST00000495688 C19orf44Q9H6X5 657 aa15.31■□□□□ 0.04
PTPN7-217ENST00000495688 EXOSC10Q01780 885 aaKnown RBP15.3■□□□□ 0.04
PTPN7-217ENST00000495688 ZSCAN25Q6NSZ9 544 aa15.3■□□□□ 0.04
PTPN7-217ENST00000495688 ZNF142P52746 1687 aaPredicted RBP15.3■□□□□ 0.04
PTPN7-217ENST00000495688 MAST3O60307 1309 aa15.3■□□□□ 0.04
PTPN7-217ENST00000495688 CACTINQ8WUQ7 758 aaKnown RBP15.3■□□□□ 0.04
PTPN7-217ENST00000495688 ALS2Q96Q42 1657 aa15.3■□□□□ 0.04
PTPN7-217ENST00000495688 ARID5BQ14865 1188 aa15.3■□□□□ 0.04
PTPN7-217ENST00000495688 ZMYM1Q5SVZ6 1142 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms