RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 POLR3GO15318 223 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 SMC2O95347 1197 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 GPTP24298 496 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 LMAN1P49257 510 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 EVCP57679 992 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 CRYMQ14894 314 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 TUBB8Q3ZCM7 444 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 PREPLQ4J6C6 727 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 LEO1Q8WVC0 666 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 MIEF2Q96C03 454 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 AKAP2Q9Y2D5 859 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 MAP2P11137 1827 aaKnown RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 SRRM3A6NNA2 597 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 CLSTN1O94985 981 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 FSBPO95073 299 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 NEFHP12036 1026 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 ZNF592Q92610 1267 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 GOLGA1Q92805 767 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 SGSM3Q96HU1 749 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 ANO10Q9NW15 660 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 DACT1Q9NYF0 836 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 A0A1W2PP64 1363 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 OVOS2A0A0G2JMS6 1433 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 OVOS2A0A0J9YW53 1432 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 OVOS2Q6IE36 1432 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 ZBTB7CA1YPR0 619 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 NRDCO43847 1150 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 PRPF6O94906 941 aaKnown RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 GJB2P29033 226 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 HNRNPH1P31943 449 aaKnown RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 GRIK3Q13003 919 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 LRCH2Q5VUJ6 765 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 WDR93Q6P2C0 686 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 CTCFLQ8NI51 663 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 PARD6BQ9BYG5 372 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 GBP3Q9H0R5 595 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 IKBKBO14920 756 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 ZEB2O60315 1214 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 RTN2O75298 545 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 FNTAP49354 379 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 FOXD4L5Q5VV16 416 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 ENGASEQ8NFI3 743 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 FOXD4L4Q8WXT5 416 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 ITFG2Q969R8 447 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 THUMPD2Q9BTF0 503 aaKnown RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 TEX13AQ9BXU3 409 aaPredicted RBP5.57□□□□□ -1.52
PRKD3-210ENST00000494667 GOLGA6L19H0YKK7 550 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 ZSCAN12O43309 604 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 SEC31AO94979 1220 aaKnown RBP5.56□□□□□ -1.52
PRKD3-210ENST00000494667 INHBEP58166 350 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 ARID5BQ14865 1188 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 TMEM139Q8IV31 216 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 ADGRF5Q8IZF2 1346 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 KAT2BQ92831 832 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 DNAJC25Q9H1X3 360 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 PTPRMP28827 1452 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 MAP3K5Q99683 1374 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 GCFC2P16383 781 aaKnown RBP5.56□□□□□ -1.52
PRKD3-210ENST00000494667 AMPHP49418 695 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 NEDD9Q14511 834 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 C11orf57Q6ZUT1 292 aaPredicted RBP5.56□□□□□ -1.52
PRKD3-210ENST00000494667 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 NAT10Q9H0A0 1025 aaKnown RBP5.56□□□□□ -1.52
PRKD3-210ENST00000494667 ZCCHC17Q9NP64 241 aaKnown RBP5.56□□□□□ -1.52
PRKD3-210ENST00000494667 MBIPQ9NS73 344 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 NALCNQ8IZF0 1738 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 EVC2Q86UK5 1308 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 VWA3AA6NCI4 1184 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 TTC36A6NLP5 189 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 SART3Q15020 963 aaKnown RBP5.56□□□□□ -1.52
PRKD3-210ENST00000494667 TWISTNBQ3B726 338 aaPredicted RBP5.56□□□□□ -1.52
PRKD3-210ENST00000494667 EMC10Q5UCC4 262 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 TICAM2Q86XR7 235 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 ANKRD18AQ8IVF6 992 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 FMNL3Q8IVF7 1028 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 DNAAF4Q8WXU2 420 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 RUBCNQ92622 972 aa5.56□□□□□ -1.52
PRKD3-210ENST00000494667 AKAP12Q02952 1782 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ZC3H4Q9UPT8 1303 aaKnown RBP5.55□□□□□ -1.52
PRKD3-210ENST00000494667 DIAPH1O60610 1272 aaKnown RBP5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ERLIN1O75477 346 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ERLIN2O94905 339 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 RESTQ13127 1097 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 CFAP70Q5T0N1 1121 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 TTLL5Q6EMB2 1281 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 TEX11Q8IYF3 940 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 SLC12A5Q9H2X9 1139 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ACBD3Q9H3P7 528 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ANKZF1Q9H8Y5 726 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 RCOR1Q9UKL0 485 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 PPP2R3AQ06190 1150 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 NBPF6Q5VWK0 638 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 BRAPQ7Z569 592 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 TAX1BP1Q86VP1 789 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 TATDN2Q93075 761 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 NBPF4Q96M43 638 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 NBPF3Q9H094 633 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ANKARQ7Z5J8 1434 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 C3P01024 1663 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 NEDD4P46934 1319 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms