RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 USP16Q9Y5T5 823 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 NRXN2Q9P2S2 1712 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 COL4A1P02462 1669 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 FANCIQ9NVI1 1328 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 MOXD2PA6NHM9 499 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 CCER2I3L3R5 266 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 HTATSF1O43719 755 aaKnown RBP6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 GUCA2AQ02747 115 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 DDR1Q08345 913 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 TAF7Q15545 349 aaPredicted RBP6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 WWC1Q8IX03 1113 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 TSPYL6Q8N831 410 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 TFCP2L1Q9NZI6 479 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 TSPYL4Q9UJ04 414 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 ANKRD31Q8N7Z5 1873 aa6.61□□□□□ -1.35
CTNNA3-204ENST00000494580 KIF13BQ9NQT8 1826 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 ARFGEF2Q9Y6D5 1785 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 USP42Q9H9J4 1324 aaKnown RBP6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 CHL1O00533 1208 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 GIGYF1O75420 1035 aaPredicted RBP6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 FDX1P10109 184 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 GYS1P13807 737 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 Q3C1V9 767 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 RIC3Q7Z5B4 369 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 SLC51AQ86UW1 340 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 TTC5Q8N0Z6 440 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 NKX2-3Q8TAU0 364 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 FMNL2Q96PY5 1086 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 CCDC87Q9NVE4 849 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 POLR3EQ9NVU0 708 aa6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 LAS1LQ9Y4W2 734 aaKnown RBP6.6□□□□□ -1.35
CTNNA3-204ENST00000494580 C10orf71Q711Q0 1435 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 ANKRD36CQ5JPF3 1778 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 TCERG1O14776 1098 aaKnown RBP6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 FMNL1O95466 1100 aaPredicted RBP6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 SSFA2P28290 1259 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 EIF5P55010 431 aaKnown RBP6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 MYSM1Q5VVJ2 828 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 BRICD5Q6PL45 260 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 C8orf58Q8NAV2 365 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 ZNF428Q96B54 188 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 SPSB2Q99619 263 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 MTFR1LQ9H019 292 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 IFT57Q9NWB7 429 aa6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 BRCA1P38398 1863 aaKnown RBP6.59□□□□□ -1.35
CTNNA3-204ENST00000494580 ABCC12Q96J65 1359 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 NUP98P52948 1817 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 ELL2O00472 640 aaPredicted RBP6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 SPTLC1O15269 473 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 RPS6KA4O75676 772 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 CAMTA2O94983 1202 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 SNRPA1P09661 255 aaKnown RBP6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 LMOD3Q0VAK6 560 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 CCDC27Q2M243 656 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 RC3H1Q5TC82 1133 aaKnown RBP6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 IFFO2Q5TF58 517 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 USPL1Q5W0Q7 1092 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 RSBN1LQ6PCB5 846 aaPredicted RBP6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 NLGN2Q8NFZ4 835 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 CHPF2Q9P2E5 772 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 WWC3Q9ULE0 1092 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 PCDHGC3Q9UN70 934 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 ZNF330Q9Y3S2 320 aaPredicted RBP6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 PXDNLA1KZ92 1463 aa6.58□□□□□ -1.36
CTNNA3-204ENST00000494580 C6orf229H3BNL8 230 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 TLL1O43897 1013 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 NEFMP07197 916 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 EIF2S2P20042 333 aaKnown RBP6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 SKIV2LQ15477 1246 aaKnown RBP6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 HLFQ16534 295 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 CSPP1Q1MSJ5 1256 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 CCDC24Q8N4L8 307 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 SYMPKQ92797 1274 aaKnown RBP6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 TBC1D2BQ9UPU7 963 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 RTCBQ9Y3I0 505 aaKnown RBP6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 DLEC1Q9Y238 1755 aa6.57□□□□□ -1.36
CTNNA3-204ENST00000494580 UBN2Q6ZU65 1347 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 CACNA1SQ13698 1873 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 ADH1BP00325 375 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 MMP10P09238 476 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 MYL6BP14649 208 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 GJA5P36382 358 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 NFIXQ14938 502 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 SH3D19Q5HYK7 790 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 DUSP27Q5VZP5 1158 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 RNF19BQ6ZMZ0 732 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 NGEFQ8N5V2 710 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 FHDC1Q9C0D6 1143 aaPredicted RBP6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 PNNQ9H307 717 aaKnown RBP6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 LIMD1Q9UGP4 676 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 LAMB2P55268 1798 aa6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 DDX60Q8IY21 1712 aaKnown RBP6.56□□□□□ -1.36
CTNNA3-204ENST00000494580 IL6STP40189 918 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms