RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ECE2O60344 883 aa30.77■■■□□ 2.52
TTC3-224ENST00000494243 CYP4F22Q6NT55 531 aa30.77■■■□□ 2.52
TTC3-224ENST00000494243 RTL9Q8NET4 1388 aa30.77■■■□□ 2.52
TTC3-224ENST00000494243 PI4KAP2A4QPH2 592 aa30.76■■■□□ 2.51
TTC3-224ENST00000494243 IGKV5-2P06315 115 aa30.76■■■□□ 2.51
TTC3-224ENST00000494243 PI4KAP1Q8N8J0 262 aa30.76■■■□□ 2.51
TTC3-224ENST00000494243 CCDC85AQ96PX6 553 aaPredicted RBP30.76■■■□□ 2.51
TTC3-224ENST00000494243 CELF2O95319 508 aaKnown RBP30.75■■■□□ 2.51
TTC3-224ENST00000494243 MAP2K1Q02750 393 aaPredicted RBP30.75■■■□□ 2.51
TTC3-224ENST00000494243 SAMD7Q7Z3H4 446 aa30.75■■■□□ 2.51
TTC3-224ENST00000494243 THSD7BQ9C0I4 1608 aa30.75■■■□□ 2.51
TTC3-224ENST00000494243 ECE1P42892 770 aa30.74■■■□□ 2.51
TTC3-224ENST00000494243 LBX1P52954 281 aa30.74■■■□□ 2.51
TTC3-224ENST00000494243 CDC37L1Q7L3B6 337 aa30.74■■■□□ 2.51
TTC3-224ENST00000494243 SAPCD2Q86UD0 394 aa30.74■■■□□ 2.51
TTC3-224ENST00000494243 ZC3H12CQ9C0D7 883 aaKnown RBP30.74■■■□□ 2.51
TTC3-224ENST00000494243 EGFRP00533 1210 aa30.73■■■□□ 2.51
TTC3-224ENST00000494243 PAXIP1Q6ZW49 1069 aaPredicted RBP30.73■■■□□ 2.51
TTC3-224ENST00000494243 G2E3Q7L622 706 aa30.73■■■□□ 2.51
TTC3-224ENST00000494243 ANKIB1Q9P2G1 1089 aa30.73■■■□□ 2.51
TTC3-224ENST00000494243 UFL1O94874 794 aa30.72■■■□□ 2.51
TTC3-224ENST00000494243 HSPA8P11142 646 aaKnown RBP30.72■■■□□ 2.51
TTC3-224ENST00000494243 RPS12P25398 132 aaKnown RBP30.72■■■□□ 2.51
TTC3-224ENST00000494243 TWISTNBQ3B726 338 aaPredicted RBP30.72■■■□□ 2.51
TTC3-224ENST00000494243 STK31Q9BXU1 1019 aa30.72■■■□□ 2.51
TTC3-224ENST00000494243 IL16Q14005 1332 aa30.72■■■□□ 2.51
TTC3-224ENST00000494243 NCBP3Q53F19 620 aaKnown RBP30.71■■■□□ 2.51
TTC3-224ENST00000494243 GGA1Q9UJY5 639 aa30.71■■■□□ 2.51
TTC3-224ENST00000494243 SCN9AQ15858 1988 aa30.71■■■□□ 2.51
TTC3-224ENST00000494243 VIL1P09327 827 aaKnown RBP30.7■■■□□ 2.51
TTC3-224ENST00000494243 GRM1Q13255 1194 aa30.7■■■□□ 2.51
TTC3-224ENST00000494243 TBC1D10BQ4KMP7 808 aaPredicted RBP30.7■■■□□ 2.51
TTC3-224ENST00000494243 USP48Q86UV5 1035 aa30.7■■■□□ 2.51
TTC3-224ENST00000494243 CTSWP56202 376 aa30.69■■■□□ 2.5
TTC3-224ENST00000494243 CWF19L2Q2TBE0 894 aaKnown RBP30.69■■■□□ 2.5
TTC3-224ENST00000494243 DLK2Q6UY11 383 aa30.69■■■□□ 2.5
TTC3-224ENST00000494243 ANKRD18AQ8IVF6 992 aa30.69■■■□□ 2.5
TTC3-224ENST00000494243 SLC4A2P04920 1241 aa30.68■■■□□ 2.5
TTC3-224ENST00000494243 TTLL11Q8NHH1 800 aa30.68■■■□□ 2.5
TTC3-224ENST00000494243 HHIPL1Q96JK4 782 aa30.68■■■□□ 2.5
TTC3-224ENST00000494243 ZNF408Q9H9D4 720 aa30.68■■■□□ 2.5
TTC3-224ENST00000494243 NEURL1BA8MQ27 555 aa30.67■■■□□ 2.5
TTC3-224ENST00000494243 AOC2O75106 756 aa30.67■■■□□ 2.5
TTC3-224ENST00000494243 NEXNQ0ZGT2 675 aa30.67■■■□□ 2.5
TTC3-224ENST00000494243 MRS2Q9HD23 443 aa30.67■■■□□ 2.5
TTC3-224ENST00000494243 MAP2K2P36507 400 aa30.66■■■□□ 2.5
TTC3-224ENST00000494243 RBM26Q5T8P6 1007 aaKnown RBP30.66■■■□□ 2.5
TTC3-224ENST00000494243 XDHP47989 1333 aa30.66■■■□□ 2.5
TTC3-224ENST00000494243 WTIPA6NIX2 430 aaPredicted RBP30.65■■■□□ 2.5
TTC3-224ENST00000494243 H7C1W4 665 aa30.65■■■□□ 2.5
TTC3-224ENST00000494243 GREM2Q9H772 168 aa30.65■■■□□ 2.5
TTC3-224ENST00000494243 G3V3G9 751 aa30.64■■■□□ 2.5
TTC3-224ENST00000494243 DCAF8Q5TAQ9 597 aa30.64■■■□□ 2.5
TTC3-224ENST00000494243 CDC5LQ99459 802 aaKnown RBP30.64■■■□□ 2.5
TTC3-224ENST00000494243 ATP2B4P23634 1241 aa30.63■■■□□ 2.49
TTC3-224ENST00000494243 KRT26Q7Z3Y9 468 aa30.63■■■□□ 2.49
TTC3-224ENST00000494243 FANCIQ9NVI1 1328 aa30.63■■■□□ 2.49
TTC3-224ENST00000494243 BSDC1Q9NW68 430 aaPredicted RBP30.62■■■□□ 2.49
TTC3-224ENST00000494243 MINPP1Q9UNW1 487 aa30.62■■■□□ 2.49
TTC3-224ENST00000494243 POLR2AP24928 1970 aaKnown RBP30.61■■■□□ 2.49
TTC3-224ENST00000494243 FLIIQ13045 1269 aa30.61■■■□□ 2.49
TTC3-224ENST00000494243 KIF4BQ2VIQ3 1234 aa30.61■■■□□ 2.49
TTC3-224ENST00000494243 UBE3BQ7Z3V4 1068 aa30.61■■■□□ 2.49
TTC3-224ENST00000494243 ZNF609O15014 1411 aa30.61■■■□□ 2.49
TTC3-224ENST00000494243 MYH3P11055 1940 aa30.61■■■□□ 2.49
TTC3-224ENST00000494243 ZNF280AP59817 542 aaPredicted RBP30.6■■■□□ 2.49
TTC3-224ENST00000494243 RSBN1LQ6PCB5 846 aaPredicted RBP30.6■■■□□ 2.49
TTC3-224ENST00000494243 AGBL3Q8NEM8 1001 aa30.6■■■□□ 2.49
TTC3-224ENST00000494243 DCPSQ96C86 337 aaKnown RBP30.6■■■□□ 2.49
TTC3-224ENST00000494243 GMLQ99445 158 aa30.6■■■□□ 2.49
TTC3-224ENST00000494243 BEGAINQ9BUH8 593 aa30.6■■■□□ 2.49
TTC3-224ENST00000494243 ASTN2O75129 1339 aaPredicted RBP30.59■■■□□ 2.49
TTC3-224ENST00000494243 ADM5C9JUS6 153 aa30.59■■■□□ 2.49
TTC3-224ENST00000494243 VAMP4O75379 141 aa30.59■■■□□ 2.49
TTC3-224ENST00000494243 GCKRQ14397 625 aa30.59■■■□□ 2.49
TTC3-224ENST00000494243 WDR63Q8IWG1 891 aa30.59■■■□□ 2.49
TTC3-224ENST00000494243 PSME4Q14997 1843 aa30.59■■■□□ 2.49
TTC3-224ENST00000494243 ANP32CO43423 234 aa30.58■■■□□ 2.49
TTC3-224ENST00000494243 ZEB1P37275 1124 aaPredicted RBP30.58■■■□□ 2.49
TTC3-224ENST00000494243 CASP7P55210 303 aa30.58■■■□□ 2.49
TTC3-224ENST00000494243 PODNQ7Z5L7 613 aa30.58■■■□□ 2.49
TTC3-224ENST00000494243 PLA2G12BQ9BX93 195 aa30.58■■■□□ 2.49
TTC3-224ENST00000494243 SALL2Q9Y467 1007 aaPredicted RBP30.58■■■□□ 2.49
TTC3-224ENST00000494243 ZNF316A6NFI3 1004 aaPredicted RBP30.56■■■□□ 2.48
TTC3-224ENST00000494243 HUNKP57058 714 aa30.56■■■□□ 2.48
TTC3-224ENST00000494243 DNAAF4Q8WXU2 420 aa30.56■■■□□ 2.48
TTC3-224ENST00000494243 GGA3Q9NZ52 723 aa30.56■■■□□ 2.48
TTC3-224ENST00000494243 SPEF2Q9C093 1822 aa30.56■■■□□ 2.48
TTC3-224ENST00000494243 MED23Q9ULK4 1368 aa30.55■■■□□ 2.48
TTC3-224ENST00000494243 USP17L3A6NCW0 530 aa30.55■■■□□ 2.48
TTC3-224ENST00000494243 USP17L4A6NCW7 530 aa30.55■■■□□ 2.48
TTC3-224ENST00000494243 EXOSC9Q06265 439 aaKnown RBP30.55■■■□□ 2.48
TTC3-224ENST00000494243 FKBP5Q13451 457 aaPredicted RBP30.55■■■□□ 2.48
TTC3-224ENST00000494243 USP17L1Q7RTZ2 530 aa30.55■■■□□ 2.48
TTC3-224ENST00000494243 LINS1Q8NG48 757 aa30.55■■■□□ 2.48
TTC3-224ENST00000494243 ZIC5Q96T25 663 aa30.55■■■□□ 2.48
TTC3-224ENST00000494243 TSKSQ9UJT2 592 aa30.55■■■□□ 2.48
TTC3-224ENST00000494243 CCT4P50991 539 aaKnown RBP30.54■■■□□ 2.48
TTC3-224ENST00000494243 BRPF1P55201 1214 aaPredicted RBP30.54■■■□□ 2.48
TTC3-224ENST00000494243 GBA2Q9HCG7 927 aaPredicted RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms