RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 MAP2K3P46734 347 aa10.07□□□□□ -0.8
SMG7-208ENST00000493609 COL19A1Q14993 1142 aa10.07□□□□□ -0.8
SMG7-208ENST00000493609 GIPC2Q8TF65 315 aa10.07□□□□□ -0.8
SMG7-208ENST00000493609 NEURL1BA8MQ27 555 aa10.06□□□□□ -0.8
SMG7-208ENST00000493609 ZBTB42B2RXF5 422 aa10.06□□□□□ -0.8
SMG7-208ENST00000493609 SIN3BO75182 1162 aa10.06□□□□□ -0.8
SMG7-208ENST00000493609 LDHBP07195 334 aaKnown RBP10.06□□□□□ -0.8
SMG7-208ENST00000493609 ARAFP10398 606 aa10.06□□□□□ -0.8
SMG7-208ENST00000493609 MLLT1Q03111 559 aaPredicted RBP10.06□□□□□ -0.8
SMG7-208ENST00000493609 COL13A1Q5TAT6 717 aaPredicted RBP10.06□□□□□ -0.8
SMG7-208ENST00000493609 NSUN5Q96P11 429 aaKnown RBP10.06□□□□□ -0.8
SMG7-208ENST00000493609 UBE2OQ9C0C9 1292 aaKnown RBP10.06□□□□□ -0.8
SMG7-208ENST00000493609 DNAJC25Q9H1X3 360 aa10.06□□□□□ -0.8
SMG7-208ENST00000493609 GGA1Q9UJY5 639 aa10.06□□□□□ -0.8
SMG7-208ENST00000493609 PHF20L1A8MW92 1017 aa10.05□□□□□ -0.8
SMG7-208ENST00000493609 PLAURQ03405 335 aa10.05□□□□□ -0.8
SMG7-208ENST00000493609 FCHSD1Q86WN1 690 aa10.05□□□□□ -0.8
SMG7-208ENST00000493609 ZNF428Q96B54 188 aa10.05□□□□□ -0.8
SMG7-208ENST00000493609 AVENQ9NQS1 362 aaPredicted RBP10.05□□□□□ -0.8
SMG7-208ENST00000493609 DNAJB12Q9NXW2 375 aaKnown RBP10.05□□□□□ -0.8
SMG7-208ENST00000493609 ADH6P28332 368 aa10.04□□□□□ -0.8
SMG7-208ENST00000493609 HFE2Q6ZVN8 426 aa10.04□□□□□ -0.8
SMG7-208ENST00000493609 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
SMG7-208ENST00000493609 PMEPA1Q969W9 287 aa10.04□□□□□ -0.8
SMG7-208ENST00000493609 OXCT2Q9BYC2 517 aaPredicted RBP10.04□□□□□ -0.8
SMG7-208ENST00000493609 AMOTL2Q9Y2J4 779 aa10.04□□□□□ -0.8
SMG7-208ENST00000493609 J3QW42 95 aa10.03□□□□□ -0.8
SMG7-208ENST00000493609 ZNF16P17020 682 aaPredicted RBP10.03□□□□□ -0.8
SMG7-208ENST00000493609 SOX18P35713 384 aa10.03□□□□□ -0.8
SMG7-208ENST00000493609 TRPM4Q8TD43 1214 aa10.03□□□□□ -0.8
SMG7-208ENST00000493609 TNFRSF25Q93038 417 aa10.03□□□□□ -0.8
SMG7-208ENST00000493609 CCDC74AQ96AQ1 378 aa10.03□□□□□ -0.8
SMG7-208ENST00000493609 RNF19AQ9NV58 838 aa10.03□□□□□ -0.8
SMG7-208ENST00000493609 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.81
SMG7-208ENST00000493609 IGHA1P01876 353 aa10.02□□□□□ -0.81
SMG7-208ENST00000493609 NRLP54845 237 aa10.02□□□□□ -0.81
SMG7-208ENST00000493609 ATP2B2Q01814 1243 aa10.02□□□□□ -0.81
SMG7-208ENST00000493609 NCAPG2Q86XI2 1143 aa10.02□□□□□ -0.81
SMG7-208ENST00000493609 EPS8L3Q8TE67 593 aaKnown RBP10.02□□□□□ -0.81
SMG7-208ENST00000493609 SALL4Q9UJQ4 1053 aa10.02□□□□□ -0.81
SMG7-208ENST00000493609 LOC102724428A0A0B4J2F2 783 aa10.01□□□□□ -0.81
SMG7-208ENST00000493609 SIK1P57059 783 aa10.01□□□□□ -0.81
SMG7-208ENST00000493609 GPLD1P80108 840 aa10.01□□□□□ -0.81
SMG7-208ENST00000493609 HYAL2Q12891 473 aa10.01□□□□□ -0.81
SMG7-208ENST00000493609 PI16Q6UXB8 463 aa10.01□□□□□ -0.81
SMG7-208ENST00000493609 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
SMG7-208ENST00000493609 BEND7Q8N7W2 519 aaPredicted RBP10.01□□□□□ -0.81
SMG7-208ENST00000493609 DUSP9Q99956 384 aaKnown RBP10.01□□□□□ -0.81
SMG7-208ENST00000493609 NPHS2Q9NP85 383 aa10.01□□□□□ -0.81
SMG7-208ENST00000493609 LATS2Q9NRM7 1088 aa10.01□□□□□ -0.81
SMG7-208ENST00000493609 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
SMG7-208ENST00000493609 KIF4AO95239 1232 aa10□□□□□ -0.81
SMG7-208ENST00000493609 HOXD8P13378 290 aaPredicted RBP10□□□□□ -0.81
SMG7-208ENST00000493609 ACPPP15309 386 aa10□□□□□ -0.81
SMG7-208ENST00000493609 ADH7P40394 386 aa10□□□□□ -0.81
SMG7-208ENST00000493609 GALNT12Q8IXK2 581 aa10□□□□□ -0.81
SMG7-208ENST00000493609 GOLGA6L1Q8N7Z2 621 aa10□□□□□ -0.81
SMG7-208ENST00000493609 DCAF5Q96JK2 942 aa10□□□□□ -0.81
SMG7-208ENST00000493609 MDFIQ99750 246 aa10□□□□□ -0.81
SMG7-208ENST00000493609 GDF2Q9UK05 429 aaPredicted RBP10□□□□□ -0.81
SMG7-208ENST00000493609 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
SMG7-208ENST00000493609 OIP5O43482 229 aa9.99□□□□□ -0.81
SMG7-208ENST00000493609 CPB1P15086 417 aa9.99□□□□□ -0.81
SMG7-208ENST00000493609 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMG7-208ENST00000493609 ZNF326Q5BKZ1 582 aaKnown RBP9.99□□□□□ -0.81
SMG7-208ENST00000493609 ALG1LQ6GMV1 187 aa9.99□□□□□ -0.81
SMG7-208ENST00000493609 SLC6A14Q9UN76 642 aa9.99□□□□□ -0.81
SMG7-208ENST00000493609 ELOA3CA0A087WX78 387 aaPredicted RBP9.98□□□□□ -0.81
SMG7-208ENST00000493609 ELOA3DA6NLF2 546 aaPredicted RBP9.98□□□□□ -0.81
SMG7-208ENST00000493609 TRPA1O75762 1119 aa9.98□□□□□ -0.81
SMG7-208ENST00000493609 ELOA3BQ3SY89 546 aa9.98□□□□□ -0.81
SMG7-208ENST00000493609 PEAR1Q5VY43 1037 aaPredicted RBP9.98□□□□□ -0.81
SMG7-208ENST00000493609 SLCO4C1Q6ZQN7 724 aa9.98□□□□□ -0.81
SMG7-208ENST00000493609 FAM35AQ86V20 835 aa9.98□□□□□ -0.81
SMG7-208ENST00000493609 ELOA3Q8NG57 546 aa9.98□□□□□ -0.81
SMG7-208ENST00000493609 FAM161BQ96MY7 647 aa9.98□□□□□ -0.81
SMG7-208ENST00000493609 NAGPAQ9UK23 515 aa9.98□□□□□ -0.81
SMG7-208ENST00000493609 ITGB2P05107 769 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 EPXP11678 715 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 EDN3P14138 238 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 RBM25P49756 843 aaKnown RBP9.97□□□□□ -0.81
SMG7-208ENST00000493609 PCSK7Q16549 785 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 PLA2G4EQ3MJ16 856 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 CEP120Q8N960 986 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 SPACA7Q96KW9 195 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 LRRC4BQ9NT99 713 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 PARP2Q9UGN5 583 aa9.97□□□□□ -0.81
SMG7-208ENST00000493609 UNCXA6NJT0 531 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 EIF2AK2P19525 551 aaKnown RBP9.96□□□□□ -0.82
SMG7-208ENST00000493609 ATP11AP98196 1134 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 PERM1Q5SV97 790 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 PODNQ7Z5L7 613 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 GALNT6Q8NCL4 622 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 FBF1Q8TES7 1133 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 EDARADDQ8WWZ3 215 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
SMG7-208ENST00000493609 A0A1W2PP55 124 aa9.95□□□□□ -0.82
SMG7-208ENST00000493609 GADD45BO75293 160 aaPredicted RBP9.95□□□□□ -0.82
SMG7-208ENST00000493609 GHRHP01286 108 aa9.95□□□□□ -0.82
SMG7-208ENST00000493609 ALAS2P22557 587 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms