RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 FOXO4P98177 505 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 LDHAL6AQ6ZMR3 332 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 PSMD1Q99460 953 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 ANKRD2Q9GZV1 360 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 BSDC1Q9NW68 430 aaPredicted RBP10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 GGA1Q9UJY5 639 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 LRRFIP2Q9Y608 721 aaKnown RBP10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 XDHP47989 1333 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 LTBP3Q9NS15 1303 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 PPIP5K2O43314 1243 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 IARSP41252 1262 aaKnown RBP10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 DPY19L2Q6NUT2 758 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 OLFM4Q6UX06 510 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 NIM1KQ8IY84 436 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 LARGE2Q8N3Y3 721 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 PANK1Q8TE04 598 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 C7orf43Q8WVR3 580 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 MEIS3Q99687 375 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 VPS33BQ9H267 617 aa10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 ZNF277Q9NRM2 450 aaPredicted RBP10.14□□□□□ -0.79
TM4SF1-204ENST00000493348 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 NFKBIEO00221 500 aa10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 UFL1O94874 794 aa10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 ATP2B4P23634 1241 aa10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 EIF6P56537 245 aaKnown RBP10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 PDE3AQ14432 1141 aa10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 MVPQ14764 893 aaKnown RBP10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 ZC3H12CQ9C0D7 883 aaKnown RBP10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 TNNQ9UQP3 1299 aa10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 LRRC37AA6NMS7 1700 aa10.13□□□□□ -0.79
TM4SF1-204ENST00000493348 SRGAP3O43295 1099 aa10.12□□□□□ -0.79
TM4SF1-204ENST00000493348 RRP1P56182 461 aaKnown RBP10.12□□□□□ -0.79
TM4SF1-204ENST00000493348 WASHC4Q2M389 1173 aa10.12□□□□□ -0.79
TM4SF1-204ENST00000493348 RABL6Q3YEC7 729 aaPredicted RBP10.12□□□□□ -0.79
TM4SF1-204ENST00000493348 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
TM4SF1-204ENST00000493348 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
TM4SF1-204ENST00000493348 MROH5Q6ZUA9 1318 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 KDM2BQ8NHM5 1336 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 RIMBP2O15034 1052 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 RLBP1P12271 317 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 GPSM2P81274 684 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 CHRNDQ07001 517 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 OS9Q13438 667 aaPredicted RBP10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 AOC3Q16853 763 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 METTL24Q5JXM2 366 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 ZNF526Q8TF50 670 aaPredicted RBP10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 ZNF594Q96JF6 807 aaPredicted RBP10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 PODXL2Q9NZ53 605 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 MINPP1Q9UNW1 487 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 LEMD3Q9Y2U8 911 aa10.11□□□□□ -0.79
TM4SF1-204ENST00000493348 HMMRO75330 724 aa10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 G3BP1Q13283 466 aaKnown RBP eCLIP10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 VPS37DQ86XT2 251 aa10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 ANKRD44Q8N8A2 993 aa10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 TBC1D16Q8TBP0 767 aa10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 RTFDC1Q9BY42 306 aaPredicted RBP10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 SIL1Q9H173 461 aa10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 GPBP1L1Q9HC44 474 aaPredicted RBP10.1□□□□□ -0.79
TM4SF1-204ENST00000493348 ZBTB7BO15156 539 aaPredicted RBP10.09□□□□□ -0.79
TM4SF1-204ENST00000493348 KIAA2012Q0VF49 1180 aa10.09□□□□□ -0.79
TM4SF1-204ENST00000493348 C16orf71Q8IYS4 520 aaPredicted RBP10.09□□□□□ -0.79
TM4SF1-204ENST00000493348 KAZALD1Q96I82 304 aa10.09□□□□□ -0.79
TM4SF1-204ENST00000493348 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
TM4SF1-204ENST00000493348 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
TM4SF1-204ENST00000493348 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
TM4SF1-204ENST00000493348 ZNF804BA4D1E1 1349 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 EYA2O00167 538 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 FRAT2O75474 233 aaPredicted RBP10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 TAF5LO75529 589 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 CENPBP07199 599 aaPredicted RBP10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 IL15P40933 162 aaPredicted RBP10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 TNIP1Q15025 636 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 ZNF804AQ7Z570 1209 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 HELBQ8NG08 1087 aaPredicted RBP10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 POLLQ9UGP5 575 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 ZNRF3Q9ULT6 936 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 GJA3Q9Y6H8 435 aa10.08□□□□□ -0.8
TM4SF1-204ENST00000493348 A0A1B0GUL6 1792 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 MED23Q9ULK4 1368 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 GLTPD2A6NH11 291 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 ECE2O60344 883 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 CIAO1O76071 339 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 IFIT1P09914 478 aaKnown RBP10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 SLC5A1P13866 664 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 ATP8B2P98198 1209 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 UBE4AQ14139 1066 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 HSP90AB4PQ58FF6 505 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 CAVIN4Q5BKX8 364 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 CHRDL2Q6WN34 429 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 RPAP2Q8IXW5 612 aaPredicted RBP10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 KLHDC4Q8TBB5 520 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 DBNDD1Q9H9R9 158 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 AKAP2Q9Y2D5 859 aa10.07□□□□□ -0.8
TM4SF1-204ENST00000493348 IQCA1LA6NCM1 817 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms