RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 RBM46Q8TBY0 533 aaKnown RBP16.74■□□□□ 0.27
NUP188-208ENST00000491502 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
NUP188-208ENST00000491502 GRM8O00222 908 aa16.73■□□□□ 0.27
NUP188-208ENST00000491502 CEP85Q6P2H3 762 aa16.73■□□□□ 0.27
NUP188-208ENST00000491502 LARGE2Q8N3Y3 721 aa16.73■□□□□ 0.27
NUP188-208ENST00000491502 JARID2Q92833 1246 aaPredicted RBP16.73■□□□□ 0.27
NUP188-208ENST00000491502 C1orf115Q9H7X2 142 aa16.73■□□□□ 0.27
NUP188-208ENST00000491502 FZD9O00144 591 aa16.72■□□□□ 0.27
NUP188-208ENST00000491502 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
NUP188-208ENST00000491502 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
NUP188-208ENST00000491502 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
NUP188-208ENST00000491502 EIF6P56537 245 aaKnown RBP16.71■□□□□ 0.27
NUP188-208ENST00000491502 ATP8B2P98198 1209 aa16.71■□□□□ 0.27
NUP188-208ENST00000491502 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
NUP188-208ENST00000491502 UTYO14607 1347 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 IQCA1LA6NCM1 817 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 PPIP5K2O43314 1243 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 CTSWP56202 376 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 FSTL1Q12841 308 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
NUP188-208ENST00000491502 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 WDR90Q96KV7 1748 aa16.7■□□□□ 0.26
NUP188-208ENST00000491502 POTECB2RU33 542 aa16.69■□□□□ 0.26
NUP188-208ENST00000491502 HSP90AB4PQ58FF6 505 aa16.69■□□□□ 0.26
NUP188-208ENST00000491502 ANKRD18AQ8IVF6 992 aa16.69■□□□□ 0.26
NUP188-208ENST00000491502 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
NUP188-208ENST00000491502 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
NUP188-208ENST00000491502 DCTPP1Q9H773 170 aa16.69■□□□□ 0.26
NUP188-208ENST00000491502 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
NUP188-208ENST00000491502 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
NUP188-208ENST00000491502 TAF1P21675 1872 aa16.69■□□□□ 0.26
NUP188-208ENST00000491502 KIAA2012Q0VF49 1180 aa16.68■□□□□ 0.26
NUP188-208ENST00000491502 AOC3Q16853 763 aa16.68■□□□□ 0.26
NUP188-208ENST00000491502 GPC2Q8N158 579 aa16.68■□□□□ 0.26
NUP188-208ENST00000491502 RTL9Q8NET4 1388 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
NUP188-208ENST00000491502 HSPA6P17066 643 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 CASP7P55210 303 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 NUCB1Q02818 461 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 SMC1BQ8NDV3 1235 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
NUP188-208ENST00000491502 EYA3Q99504 573 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 ZNRF3Q9ULT6 936 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
NUP188-208ENST00000491502 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
NUP188-208ENST00000491502 CSF1RP07333 972 aa16.66■□□□□ 0.26
NUP188-208ENST00000491502 GPSM2P81274 684 aa16.66■□□□□ 0.26
NUP188-208ENST00000491502 MTX1Q13505 466 aa16.66■□□□□ 0.26
NUP188-208ENST00000491502 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
NUP188-208ENST00000491502 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
NUP188-208ENST00000491502 MYH3P11055 1940 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 GREM2Q9H772 168 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 BSDC1Q9NW68 430 aaPredicted RBP16.65■□□□□ 0.26
NUP188-208ENST00000491502 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 HACL1Q9UJ83 578 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
NUP188-208ENST00000491502 SCN4AP35499 1836 aa16.64■□□□□ 0.25
NUP188-208ENST00000491502 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
NUP188-208ENST00000491502 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
NUP188-208ENST00000491502 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
NUP188-208ENST00000491502 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
NUP188-208ENST00000491502 GJA3Q9Y6H8 435 aa16.64■□□□□ 0.25
NUP188-208ENST00000491502 LMOD1P29536 600 aaPredicted RBP16.63■□□□□ 0.25
NUP188-208ENST00000491502 RGS3P49796 1198 aa16.63■□□□□ 0.25
NUP188-208ENST00000491502 APLP1P51693 650 aa16.63■□□□□ 0.25
NUP188-208ENST00000491502 POLA2Q14181 598 aa16.63■□□□□ 0.25
NUP188-208ENST00000491502 TNIP1Q15025 636 aa16.63■□□□□ 0.25
NUP188-208ENST00000491502 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
NUP188-208ENST00000491502 ZC3H12CQ9C0D7 883 aaKnown RBP16.63■□□□□ 0.25
NUP188-208ENST00000491502 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
NUP188-208ENST00000491502 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
NUP188-208ENST00000491502 ITGA6P23229 1130 aa16.62■□□□□ 0.25
NUP188-208ENST00000491502 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
NUP188-208ENST00000491502 CXCL9Q07325 125 aa16.62■□□□□ 0.25
NUP188-208ENST00000491502 CIAPIN1Q6FI81 312 aa16.62■□□□□ 0.25
NUP188-208ENST00000491502 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
NUP188-208ENST00000491502 ERC1Q8IUD2 1116 aa16.62■□□□□ 0.25
NUP188-208ENST00000491502 XDHP47989 1333 aa16.62■□□□□ 0.25
NUP188-208ENST00000491502 COL4A5P29400 1685 aa16.62■□□□□ 0.25
NUP188-208ENST00000491502 ANKRD18BA2A2Z9 1011 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 RIMBP2O15034 1052 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 EPHX2P34913 555 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 FOXO4P98177 505 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 CHADLQ6NUI6 762 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 MINPP1Q9UNW1 487 aa16.61■□□□□ 0.25
NUP188-208ENST00000491502 G3V3G9 751 aa16.6■□□□□ 0.25
NUP188-208ENST00000491502 UFL1O94874 794 aa16.6■□□□□ 0.25
NUP188-208ENST00000491502 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
NUP188-208ENST00000491502 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
NUP188-208ENST00000491502 LDHDQ86WU2 507 aa16.6■□□□□ 0.25
NUP188-208ENST00000491502 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms