RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 GPRC5DQ9NZD1 345 aa22.14■■□□□ 1.13
SEC13-218ENST00000490283 GMPSP49915 693 aaPredicted RBP22.13■■□□□ 1.13
SEC13-218ENST00000490283 ADARB2Q9NS39 739 aaKnown RBP22.13■■□□□ 1.13
SEC13-218ENST00000490283 BSDC1Q9NW68 430 aaPredicted RBP22.13■■□□□ 1.13
SEC13-218ENST00000490283 COL4A1P02462 1669 aa22.12■■□□□ 1.13
SEC13-218ENST00000490283 ECE2O60344 883 aa22.12■■□□□ 1.13
SEC13-218ENST00000490283 ATP2B4P23634 1241 aa22.12■■□□□ 1.13
SEC13-218ENST00000490283 SRCIN1Q9C0H9 1055 aa22.12■■□□□ 1.13
SEC13-218ENST00000490283 C9orf78Q9NZ63 289 aaPredicted RBP22.12■■□□□ 1.13
SEC13-218ENST00000490283 CEP350Q5VT06 3117 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 YDJCA8MPS7 323 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 ALDH1L1O75891 902 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 ITGA6P23229 1130 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 CASP7P55210 303 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 DOK7Q18PE1 504 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 CNTROBQ8N137 903 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 GPR101Q96P66 508 aaPredicted RBP22.11■■□□□ 1.13
SEC13-218ENST00000490283 MPHOSPH8Q99549 860 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 CREBZFQ9NS37 354 aa22.11■■□□□ 1.13
SEC13-218ENST00000490283 GRM8O00222 908 aa22.1■■□□□ 1.13
SEC13-218ENST00000490283 FAM161AQ3B820 660 aa22.1■■□□□ 1.13
SEC13-218ENST00000490283 MAP1SQ66K74 1059 aaPredicted RBP22.1■■□□□ 1.13
SEC13-218ENST00000490283 CHMP3Q9Y3E7 222 aa22.1■■□□□ 1.13
SEC13-218ENST00000490283 PTPRCP08575 1304 aa22.09■■□□□ 1.13
SEC13-218ENST00000490283 ANKRD18BA2A2Z9 1011 aa22.09■■□□□ 1.13
SEC13-218ENST00000490283 H7C1D1 291 aa22.09■■□□□ 1.13
SEC13-218ENST00000490283 CSF1RP07333 972 aa22.09■■□□□ 1.13
SEC13-218ENST00000490283 MRPL50Q8N5N7 158 aaKnown RBP22.09■■□□□ 1.13
SEC13-218ENST00000490283 MINPP1Q9UNW1 487 aa22.09■■□□□ 1.13
SEC13-218ENST00000490283 PASKQ96RG2 1323 aa22.08■■□□□ 1.13
SEC13-218ENST00000490283 MYH3P11055 1940 aa22.08■■□□□ 1.13
SEC13-218ENST00000490283 PSMD14O00487 310 aa22.08■■□□□ 1.13
SEC13-218ENST00000490283 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
SEC13-218ENST00000490283 LTBP1Q14766 1721 aa22.07■■□□□ 1.12
SEC13-218ENST00000490283 ITGBL1O95965 494 aaPredicted RBP22.07■■□□□ 1.12
SEC13-218ENST00000490283 RPS12P25398 132 aaKnown RBP22.07■■□□□ 1.12
SEC13-218ENST00000490283 IFIT5Q13325 482 aaKnown RBP22.07■■□□□ 1.12
SEC13-218ENST00000490283 CDCA7LQ96GN5 454 aa22.07■■□□□ 1.12
SEC13-218ENST00000490283 ANKRD2Q9GZV1 360 aa22.07■■□□□ 1.12
SEC13-218ENST00000490283 CNOT7Q9UIV1 285 aaKnown RBP22.07■■□□□ 1.12
SEC13-218ENST00000490283 TMEM88BA6NKF7 163 aa22.06■■□□□ 1.12
SEC13-218ENST00000490283 ALDH1L2Q3SY69 923 aa22.06■■□□□ 1.12
SEC13-218ENST00000490283 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
SEC13-218ENST00000490283 DPF2Q92785 391 aa22.06■■□□□ 1.12
SEC13-218ENST00000490283 ADAMTSL1Q8N6G6 1762 aa22.06■■□□□ 1.12
SEC13-218ENST00000490283 CT47B1P0C2W7 299 aaPredicted RBP22.05■■□□□ 1.12
SEC13-218ENST00000490283 CCT4P50991 539 aaKnown RBP22.05■■□□□ 1.12
SEC13-218ENST00000490283 CCDC57Q2TAC2 916 aa22.05■■□□□ 1.12
SEC13-218ENST00000490283 TAF7LQ5H9L4 462 aa22.05■■□□□ 1.12
SEC13-218ENST00000490283 MICALL2Q8IY33 904 aa22.05■■□□□ 1.12
SEC13-218ENST00000490283 SMC4Q9NTJ3 1288 aa22.05■■□□□ 1.12
SEC13-218ENST00000490283 LEMD3Q9Y2U8 911 aa22.05■■□□□ 1.12
SEC13-218ENST00000490283 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
SEC13-218ENST00000490283 MED23Q9ULK4 1368 aa22.04■■□□□ 1.12
SEC13-218ENST00000490283 KCNJ4P48050 445 aa22.04■■□□□ 1.12
SEC13-218ENST00000490283 FOXO4P98177 505 aa22.04■■□□□ 1.12
SEC13-218ENST00000490283 LMBR1LQ6UX01 489 aa22.04■■□□□ 1.12
SEC13-218ENST00000490283 PODNQ7Z5L7 613 aa22.03■■□□□ 1.12
SEC13-218ENST00000490283 JMYQ8N9B5 988 aa22.03■■□□□ 1.12
SEC13-218ENST00000490283 TRMT2AQ8IZ69 625 aaKnown RBP22.02■■□□□ 1.12
SEC13-218ENST00000490283 ZC3H15Q8WU90 426 aaKnown RBP22.02■■□□□ 1.12
SEC13-218ENST00000490283 VIL1P09327 827 aaKnown RBP22.01■■□□□ 1.11
SEC13-218ENST00000490283 KCNQ5Q9NR82 932 aa22.01■■□□□ 1.11
SEC13-218ENST00000490283 MKRN1Q9UHC7 482 aaKnown RBP22.01■■□□□ 1.11
SEC13-218ENST00000490283 ZNF804BA4D1E1 1349 aa22.01■■□□□ 1.11
SEC13-218ENST00000490283 CHRNDQ07001 517 aa22■■□□□ 1.11
SEC13-218ENST00000490283 TRPM4Q8TD43 1214 aa22■■□□□ 1.11
SEC13-218ENST00000490283 COA1Q9GZY4 146 aa22■■□□□ 1.11
SEC13-218ENST00000490283 USP17L3A6NCW0 530 aa21.99■■□□□ 1.11
SEC13-218ENST00000490283 USP17L4A6NCW7 530 aa21.99■■□□□ 1.11
SEC13-218ENST00000490283 RSBN1LQ6PCB5 846 aaPredicted RBP21.99■■□□□ 1.11
SEC13-218ENST00000490283 USP17L1Q7RTZ2 530 aa21.99■■□□□ 1.11
SEC13-218ENST00000490283 MIER1Q8N108 512 aa21.99■■□□□ 1.11
SEC13-218ENST00000490283 AGBL3Q8NEM8 1001 aa21.99■■□□□ 1.11
SEC13-218ENST00000490283 ABT1Q9ULW3 272 aaKnown RBP21.99■■□□□ 1.11
SEC13-218ENST00000490283 SPEF2Q9C093 1822 aa21.99■■□□□ 1.11
SEC13-218ENST00000490283 SHTN1A0MZ66 631 aa21.98■■□□□ 1.11
SEC13-218ENST00000490283 TBC1D10BQ4KMP7 808 aaPredicted RBP21.98■■□□□ 1.11
SEC13-218ENST00000490283 EPHA10Q5JZY3 1008 aa21.98■■□□□ 1.11
SEC13-218ENST00000490283 LDHAL6AQ6ZMR3 332 aa21.98■■□□□ 1.11
SEC13-218ENST00000490283 FBXW7Q969H0 707 aa21.98■■□□□ 1.11
SEC13-218ENST00000490283 CNNM1Q9NRU3 951 aa21.98■■□□□ 1.11
SEC13-218ENST00000490283 CNTNAP1P78357 1384 aa21.98■■□□□ 1.11
SEC13-218ENST00000490283 NBPF7P0C2Y1 421 aaPredicted RBP21.97■■□□□ 1.11
SEC13-218ENST00000490283 HIRAP54198 1017 aaPredicted RBP21.97■■□□□ 1.11
SEC13-218ENST00000490283 RBM26Q5T8P6 1007 aaKnown RBP21.97■■□□□ 1.11
SEC13-218ENST00000490283 CDC37L1Q7L3B6 337 aa21.97■■□□□ 1.11
SEC13-218ENST00000490283 SAMD7Q7Z3H4 446 aa21.97■■□□□ 1.11
SEC13-218ENST00000490283 SUCLG2Q96I99 432 aa21.97■■□□□ 1.11
SEC13-218ENST00000490283 PGAP2Q9UHJ9 254 aa21.97■■□□□ 1.11
SEC13-218ENST00000490283 UTYO14607 1347 aa21.97■■□□□ 1.11
SEC13-218ENST00000490283 KIF4BQ2VIQ3 1234 aa21.96■■□□□ 1.11
SEC13-218ENST00000490283 WTIPA6NIX2 430 aaPredicted RBP21.95■■□□□ 1.1
SEC13-218ENST00000490283 TRAF5O00463 557 aa21.95■■□□□ 1.1
SEC13-218ENST00000490283 GLIS2Q9BZE0 524 aaPredicted RBP21.95■■□□□ 1.1
SEC13-218ENST00000490283 API5Q9BZZ5 524 aaKnown RBP21.95■■□□□ 1.1
SEC13-218ENST00000490283 ZNF609O15014 1411 aa21.95■■□□□ 1.1
SEC13-218ENST00000490283 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
SEC13-218ENST00000490283 DEFB115Q30KQ5 88 aa21.94■■□□□ 1.1
SEC13-218ENST00000490283 HELBQ8NG08 1087 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms