RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TAF7LQ5H9L4 462 aa13.87□□□□□ -0.19
CPSF7-212ENST00000489728 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
CPSF7-212ENST00000489728 CHMP4BQ9H444 224 aaKnown RBP13.87□□□□□ -0.19
CPSF7-212ENST00000489728 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
CPSF7-212ENST00000489728 GGA1Q9UJY5 639 aa13.87□□□□□ -0.19
CPSF7-212ENST00000489728 NSFL1CQ9UNZ2 370 aaKnown RBP13.87□□□□□ -0.19
CPSF7-212ENST00000489728 TNNQ9UQP3 1299 aa13.87□□□□□ -0.19
CPSF7-212ENST00000489728 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
CPSF7-212ENST00000489728 A0A1B0GUL6 1792 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 GNAI2P04899 355 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 RLBP1P12271 317 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 ATP2B4P23634 1241 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 LARGE2Q8N3Y3 721 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 ZNF784Q8NCA9 323 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-212ENST00000489728 TBC1D16Q8TBP0 767 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
CPSF7-212ENST00000489728 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 FZD9O00144 591 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 DPY19L2Q6NUT2 758 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 LDHAL6AQ6ZMR3 332 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 SLC51AQ86UW1 340 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 ITPRIPQ8IWB1 547 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 LRRFIP2Q9Y608 721 aaKnown RBP13.85□□□□□ -0.19
CPSF7-212ENST00000489728 COL4A5P29400 1685 aa13.85□□□□□ -0.19
CPSF7-212ENST00000489728 GLTPD2A6NH11 291 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 C6orf229H3BNL8 230 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 ZBTB7BO15156 539 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-212ENST00000489728 UFL1O94874 794 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 AOC3Q16853 763 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 POLLQ9UGP5 575 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 DDX19BQ9UMR2 479 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 MROH5Q6ZUA9 1318 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 WDR90Q96KV7 1748 aa13.84□□□□□ -0.19
CPSF7-212ENST00000489728 CHRNDQ07001 517 aa13.83□□□□□ -0.2
CPSF7-212ENST00000489728 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
CPSF7-212ENST00000489728 C15orf52Q6ZUT6 534 aaKnown RBP13.83□□□□□ -0.2
CPSF7-212ENST00000489728 ZC3H12CQ9C0D7 883 aaKnown RBP13.83□□□□□ -0.2
CPSF7-212ENST00000489728 GPBP1L1Q9HC44 474 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-212ENST00000489728 CNNM1Q9NRU3 951 aa13.83□□□□□ -0.2
CPSF7-212ENST00000489728 ZNRF3Q9ULT6 936 aa13.83□□□□□ -0.2
CPSF7-212ENST00000489728 CIAO1O76071 339 aa13.82□□□□□ -0.2
CPSF7-212ENST00000489728 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-212ENST00000489728 EIF6P56537 245 aaKnown RBP13.82□□□□□ -0.2
CPSF7-212ENST00000489728 GPC2Q8N158 579 aa13.82□□□□□ -0.2
CPSF7-212ENST00000489728 PANK1Q8TE04 598 aa13.82□□□□□ -0.2
CPSF7-212ENST00000489728 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-212ENST00000489728 RIPOR2Q9Y4F9 1068 aa13.82□□□□□ -0.2
CPSF7-212ENST00000489728 ZNF804BA4D1E1 1349 aa13.82□□□□□ -0.2
CPSF7-212ENST00000489728 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
CPSF7-212ENST00000489728 ZNF594Q96JF6 807 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-212ENST00000489728 COPRSQ9NQ92 184 aa13.81□□□□□ -0.2
CPSF7-212ENST00000489728 ZNF609O15014 1411 aa13.81□□□□□ -0.2
CPSF7-212ENST00000489728 EYA2O00167 538 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 SRGAP3O43295 1099 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 KCNJ4P48050 445 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 UBE4AQ14139 1066 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 TNIP1Q15025 636 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 ZNF541Q9H0D2 1346 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 SCN4AP35499 1836 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 PSME4Q14997 1843 aa13.8□□□□□ -0.2
CPSF7-212ENST00000489728 PLIN1O60240 522 aa13.79□□□□□ -0.2
CPSF7-212ENST00000489728 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
CPSF7-212ENST00000489728 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
CPSF7-212ENST00000489728 COA1Q9GZY4 146 aa13.79□□□□□ -0.2
CPSF7-212ENST00000489728 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 G3V3G9 751 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 ECE2O60344 883 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 PDE8BO95263 885 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 IL15P40933 162 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-212ENST00000489728 METTL24Q5JXM2 366 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 DCAF8Q5TAQ9 597 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 VGLL2Q8N8G2 317 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 SSH3Q8TE77 659 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 PUS3Q9BZE2 481 aaKnown RBP13.78□□□□□ -0.2
CPSF7-212ENST00000489728 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 COG6Q9Y2V7 657 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 IRS2Q9Y4H2 1338 aa13.78□□□□□ -0.2
CPSF7-212ENST00000489728 RIMBP2O15034 1052 aa13.77□□□□□ -0.21
CPSF7-212ENST00000489728 VEGFAP15692 232 aaPredicted RBP13.77□□□□□ -0.21
CPSF7-212ENST00000489728 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
CPSF7-212ENST00000489728 POLA2Q14181 598 aa13.77□□□□□ -0.21
CPSF7-212ENST00000489728 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.21
CPSF7-212ENST00000489728 LRRC24Q50LG9 513 aa13.77□□□□□ -0.21
CPSF7-212ENST00000489728 CIAPIN1Q6FI81 312 aa13.77□□□□□ -0.21
CPSF7-212ENST00000489728 ZNF804AQ7Z570 1209 aa13.77□□□□□ -0.21
CPSF7-212ENST00000489728 ZNF526Q8TF50 670 aaPredicted RBP13.77□□□□□ -0.21
CPSF7-212ENST00000489728 YDJCA8MPS7 323 aa13.76□□□□□ -0.21
CPSF7-212ENST00000489728 TAF5LO75529 589 aa13.76□□□□□ -0.21
CPSF7-212ENST00000489728 DDNO94850 711 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-212ENST00000489728 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
CPSF7-212ENST00000489728 CXCL9Q07325 125 aa13.76□□□□□ -0.21
CPSF7-212ENST00000489728 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
CPSF7-212ENST00000489728 RPAP2Q8IXW5 612 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-212ENST00000489728 HELBQ8NG08 1087 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-212ENST00000489728 KLHDC4Q8TBB5 520 aa13.76□□□□□ -0.21
CPSF7-212ENST00000489728 DBNDD1Q9H9R9 158 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms