RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 ALDH1L1O75891 902 aa22.6■■□□□ 1.21
ABCF3-217ENST00000489719 ITGA6P23229 1130 aa22.6■■□□□ 1.21
ABCF3-217ENST00000489719 ATP2B4P23634 1241 aa22.6■■□□□ 1.21
ABCF3-217ENST00000489719 GMPSP49915 693 aaPredicted RBP22.6■■□□□ 1.21
ABCF3-217ENST00000489719 USP50Q70EL3 339 aaPredicted RBP22.6■■□□□ 1.21
ABCF3-217ENST00000489719 GPR101Q96P66 508 aaPredicted RBP22.6■■□□□ 1.21
ABCF3-217ENST00000489719 MPHOSPH8Q99549 860 aa22.6■■□□□ 1.21
ABCF3-217ENST00000489719 RTL9Q8NET4 1388 aa22.6■■□□□ 1.21
ABCF3-217ENST00000489719 XDHP47989 1333 aa22.59■■□□□ 1.21
ABCF3-217ENST00000489719 YDJCA8MPS7 323 aa22.59■■□□□ 1.21
ABCF3-217ENST00000489719 MIER1Q8N108 512 aa22.59■■□□□ 1.21
ABCF3-217ENST00000489719 SSH1Q8WYL5 1049 aa22.59■■□□□ 1.21
ABCF3-217ENST00000489719 GPRC5DQ9NZD1 345 aa22.59■■□□□ 1.21
ABCF3-217ENST00000489719 MINPP1Q9UNW1 487 aa22.59■■□□□ 1.21
ABCF3-217ENST00000489719 GRM8O00222 908 aa22.58■■□□□ 1.21
ABCF3-217ENST00000489719 ECE2O60344 883 aa22.58■■□□□ 1.21
ABCF3-217ENST00000489719 TRMT2AQ8IZ69 625 aaKnown RBP22.58■■□□□ 1.21
ABCF3-217ENST00000489719 CNTROBQ8N137 903 aa22.58■■□□□ 1.21
ABCF3-217ENST00000489719 ADARB2Q9NS39 739 aaKnown RBP22.58■■□□□ 1.21
ABCF3-217ENST00000489719 CHMP3Q9Y3E7 222 aa22.58■■□□□ 1.21
ABCF3-217ENST00000489719 ANKRD18BA2A2Z9 1011 aa22.57■■□□□ 1.2
ABCF3-217ENST00000489719 FAM161AQ3B820 660 aa22.57■■□□□ 1.2
ABCF3-217ENST00000489719 ALDH1L2Q3SY69 923 aa22.57■■□□□ 1.2
ABCF3-217ENST00000489719 MAP1SQ66K74 1059 aaPredicted RBP22.57■■□□□ 1.2
ABCF3-217ENST00000489719 TAF1P21675 1872 aa22.57■■□□□ 1.2
ABCF3-217ENST00000489719 CEP350Q5VT06 3117 aa22.57■■□□□ 1.2
ABCF3-217ENST00000489719 PTPRCP08575 1304 aa22.57■■□□□ 1.2
ABCF3-217ENST00000489719 H7C1D1 291 aa22.56■■□□□ 1.2
ABCF3-217ENST00000489719 IFIT5Q13325 482 aaKnown RBP22.56■■□□□ 1.2
ABCF3-217ENST00000489719 KLRG1Q96E93 195 aa22.56■■□□□ 1.2
ABCF3-217ENST00000489719 CNOT7Q9UIV1 285 aaKnown RBP22.56■■□□□ 1.2
ABCF3-217ENST00000489719 SCN4AP35499 1836 aa22.55■■□□□ 1.2
ABCF3-217ENST00000489719 PSMD14O00487 310 aa22.55■■□□□ 1.2
ABCF3-217ENST00000489719 ITGBL1O95965 494 aaPredicted RBP22.55■■□□□ 1.2
ABCF3-217ENST00000489719 CT47B1P0C2W7 299 aaPredicted RBP22.55■■□□□ 1.2
ABCF3-217ENST00000489719 FOXO4P98177 505 aa22.55■■□□□ 1.2
ABCF3-217ENST00000489719 ANKRD2Q9GZV1 360 aa22.55■■□□□ 1.2
ABCF3-217ENST00000489719 LMBR1LQ6UX01 489 aa22.54■■□□□ 1.2
ABCF3-217ENST00000489719 DPF2Q92785 391 aa22.54■■□□□ 1.2
ABCF3-217ENST00000489719 KCNQ5Q9NR82 932 aa22.54■■□□□ 1.2
ABCF3-217ENST00000489719 SMC4Q9NTJ3 1288 aa22.54■■□□□ 1.2
ABCF3-217ENST00000489719 LEMD3Q9Y2U8 911 aa22.54■■□□□ 1.2
ABCF3-217ENST00000489719 ZBTB12Q9Y330 459 aaPredicted RBP22.54■■□□□ 1.2
ABCF3-217ENST00000489719 CCT4P50991 539 aaKnown RBP22.53■■□□□ 1.2
ABCF3-217ENST00000489719 CCDC57Q2TAC2 916 aa22.53■■□□□ 1.2
ABCF3-217ENST00000489719 CREBZFQ9NS37 354 aa22.53■■□□□ 1.2
ABCF3-217ENST00000489719 CACNA1FO60840 1977 aa22.52■■□□□ 1.2
ABCF3-217ENST00000489719 COL4A1P02462 1669 aa22.52■■□□□ 1.2
ABCF3-217ENST00000489719 RPS12P25398 132 aaKnown RBP22.52■■□□□ 1.2
ABCF3-217ENST00000489719 TAF7LQ5H9L4 462 aa22.52■■□□□ 1.2
ABCF3-217ENST00000489719 PASKQ96RG2 1323 aa22.52■■□□□ 1.2
ABCF3-217ENST00000489719 DUOX1Q9NRD9 1551 aa22.51■■□□□ 1.19
ABCF3-217ENST00000489719 PODNQ7Z5L7 613 aa22.51■■□□□ 1.19
ABCF3-217ENST00000489719 MICALL2Q8IY33 904 aa22.51■■□□□ 1.19
ABCF3-217ENST00000489719 WTIPA6NIX2 430 aaPredicted RBP22.5■■□□□ 1.19
ABCF3-217ENST00000489719 TMEM88BA6NKF7 163 aa22.5■■□□□ 1.19
ABCF3-217ENST00000489719 VIL1P09327 827 aaKnown RBP22.5■■□□□ 1.19
ABCF3-217ENST00000489719 KCNJ4P48050 445 aa22.5■■□□□ 1.19
ABCF3-217ENST00000489719 EPHA10Q5JZY3 1008 aa22.5■■□□□ 1.19
ABCF3-217ENST00000489719 LRRC37AA6NMS7 1700 aa22.5■■□□□ 1.19
ABCF3-217ENST00000489719 CHRNDQ07001 517 aa22.49■■□□□ 1.19
ABCF3-217ENST00000489719 ZNF804BA4D1E1 1349 aa22.49■■□□□ 1.19
ABCF3-217ENST00000489719 NBPF7P0C2Y1 421 aaPredicted RBP22.48■■□□□ 1.19
ABCF3-217ENST00000489719 LDHAL6AQ6ZMR3 332 aa22.48■■□□□ 1.19
ABCF3-217ENST00000489719 ZC3H15Q8WU90 426 aaKnown RBP22.48■■□□□ 1.19
ABCF3-217ENST00000489719 SUCLG2Q96I99 432 aa22.48■■□□□ 1.19
ABCF3-217ENST00000489719 CNNM1Q9NRU3 951 aa22.47■■□□□ 1.19
ABCF3-217ENST00000489719 NOB1Q9ULX3 412 aaKnown RBP22.47■■□□□ 1.19
ABCF3-217ENST00000489719 SHTN1A0MZ66 631 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 USP17L3A6NCW0 530 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 USP17L4A6NCW7 530 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 HIRAP54198 1017 aaPredicted RBP22.46■■□□□ 1.19
ABCF3-217ENST00000489719 RBM26Q5T8P6 1007 aaKnown RBP22.46■■□□□ 1.19
ABCF3-217ENST00000489719 USP17L1Q7RTZ2 530 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 SAMD7Q7Z3H4 446 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 JMYQ8N9B5 988 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 ZNF594Q96JF6 807 aaPredicted RBP22.46■■□□□ 1.19
ABCF3-217ENST00000489719 COA1Q9GZY4 146 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 PGAP2Q9UHJ9 254 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 UTYO14607 1347 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 MED23Q9ULK4 1368 aa22.46■■□□□ 1.19
ABCF3-217ENST00000489719 HNRNPUQ00839 825 aaKnown RBP eCLIP22.45■■□□□ 1.18
ABCF3-217ENST00000489719 TBC1D10BQ4KMP7 808 aaPredicted RBP22.45■■□□□ 1.18
ABCF3-217ENST00000489719 RSBN1LQ6PCB5 846 aaPredicted RBP22.45■■□□□ 1.18
ABCF3-217ENST00000489719 AGBL3Q8NEM8 1001 aa22.45■■□□□ 1.18
ABCF3-217ENST00000489719 HELBQ8NG08 1087 aaPredicted RBP22.45■■□□□ 1.18
ABCF3-217ENST00000489719 TRPM4Q8TD43 1214 aa22.45■■□□□ 1.18
ABCF3-217ENST00000489719 MKRN1Q9UHC7 482 aaKnown RBP22.45■■□□□ 1.18
ABCF3-217ENST00000489719 PLIN1O60240 522 aa22.44■■□□□ 1.18
ABCF3-217ENST00000489719 TAF5LO75529 589 aa22.44■■□□□ 1.18
ABCF3-217ENST00000489719 API5Q9BZZ5 524 aaKnown RBP22.44■■□□□ 1.18
ABCF3-217ENST00000489719 RARSP54136 660 aaKnown RBP22.43■■□□□ 1.18
ABCF3-217ENST00000489719 BRPF1P55201 1214 aaPredicted RBP22.43■■□□□ 1.18
ABCF3-217ENST00000489719 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
ABCF3-217ENST00000489719 TXNRD3Q86VQ6 643 aa22.43■■□□□ 1.18
ABCF3-217ENST00000489719 FBXW7Q969H0 707 aa22.43■■□□□ 1.18
ABCF3-217ENST00000489719 KAZALD1Q96I82 304 aa22.43■■□□□ 1.18
ABCF3-217ENST00000489719 USP44Q9H0E7 712 aa22.43■■□□□ 1.18
ABCF3-217ENST00000489719 BICC1Q9H694 974 aaKnown RBP22.43■■□□□ 1.18
ABCF3-217ENST00000489719 LTBP1Q14766 1721 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms