RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 EXOC6Q8TAG9 804 aa10.35□□□□□ -0.75
SF1-218ENST00000489544 MPHOSPH8Q99549 860 aa10.35□□□□□ -0.75
SF1-218ENST00000489544 ZNF277Q9NRM2 450 aaPredicted RBP10.35□□□□□ -0.75
SF1-218ENST00000489544 BSDC1Q9NW68 430 aaPredicted RBP10.35□□□□□ -0.75
SF1-218ENST00000489544 MINPP1Q9UNW1 487 aa10.35□□□□□ -0.75
SF1-218ENST00000489544 NSFL1CQ9UNZ2 370 aaKnown RBP10.35□□□□□ -0.75
SF1-218ENST00000489544 ATP8B2P98198 1209 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 CHRNDQ07001 517 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 MTX1Q13505 466 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 LDHAL6AQ6ZMR3 332 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 SIRT2Q8IXJ6 389 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 MPNDQ8N594 471 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 CNNM1Q9NRU3 951 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 POLLQ9UGP5 575 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 HDAC5Q9UQL6 1122 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 SPEF2Q9C093 1822 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 ARFGEF1Q9Y6D6 1849 aa10.34□□□□□ -0.75
SF1-218ENST00000489544 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
SF1-218ENST00000489544 POLA2Q14181 598 aa10.33□□□□□ -0.76
SF1-218ENST00000489544 DPP8Q6V1X1 898 aaPredicted RBP10.33□□□□□ -0.76
SF1-218ENST00000489544 TMC4Q7Z404 712 aa10.33□□□□□ -0.76
SF1-218ENST00000489544 RTKN2Q8IZC4 609 aa10.33□□□□□ -0.76
SF1-218ENST00000489544 TAOK3Q9H2K8 898 aa10.33□□□□□ -0.76
SF1-218ENST00000489544 ANKIB1Q9P2G1 1089 aa10.33□□□□□ -0.76
SF1-218ENST00000489544 RIPOR2Q9Y4F9 1068 aa10.33□□□□□ -0.76
SF1-218ENST00000489544 PCDHB15Q9Y5E8 787 aa10.33□□□□□ -0.76
SF1-218ENST00000489544 DUOX1Q9NRD9 1551 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 C6orf229H3BNL8 230 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 EYA2O00167 538 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 RIMBP2O15034 1052 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 UFL1O94874 794 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 CENPBP07199 599 aaPredicted RBP10.32□□□□□ -0.76
SF1-218ENST00000489544 KLRK1P26718 216 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 SOGA3Q5TF21 947 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 C9orf131Q5VYM1 1079 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 CC2D2BQ6DHV5 1058 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 ATG9AQ7Z3C6 839 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 TBC1D16Q8TBP0 767 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 SSH3Q8TE77 659 aa10.32□□□□□ -0.76
SF1-218ENST00000489544 TMX4Q9H1E5 349 aaPredicted RBP10.32□□□□□ -0.76
SF1-218ENST00000489544 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
SF1-218ENST00000489544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.32□□□□□ -0.76
SF1-218ENST00000489544 LRRC37AA6NMS7 1700 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 AOC3Q16853 763 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 METTL24Q5JXM2 366 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 TXNRD3Q86VQ6 643 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 PODXL2Q9NZ53 605 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 RNF181Q9P0P0 153 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 GGA1Q9UJY5 639 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 FER1L6Q2WGJ9 1857 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 COL4A5P29400 1685 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 XDHP47989 1333 aa10.31□□□□□ -0.76
SF1-218ENST00000489544 PPIP5K2O43314 1243 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
SF1-218ENST00000489544 LMNB1P20700 586 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 IARSP41252 1262 aaKnown RBP10.3□□□□□ -0.76
SF1-218ENST00000489544 DOK7Q18PE1 504 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 VGLL2Q8N8G2 317 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
SF1-218ENST00000489544 PSMD1Q99460 953 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 RTFDC1Q9BY42 306 aaPredicted RBP10.3□□□□□ -0.76
SF1-218ENST00000489544 CHMP4BQ9H444 224 aaKnown RBP10.3□□□□□ -0.76
SF1-218ENST00000489544 EXOC6BQ9Y2D4 811 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 LTBP3Q9NS15 1303 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 LTBP1Q14766 1721 aa10.3□□□□□ -0.76
SF1-218ENST00000489544 APBB1O00213 710 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 ATP2B4P23634 1241 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 KCNJ4P48050 445 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 TFCP2Q12800 502 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 WASHC4Q2M389 1173 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 RPAP2Q8IXW5 612 aaPredicted RBP10.29□□□□□ -0.76
SF1-218ENST00000489544 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 ANKRD2Q9GZV1 360 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 ZNF804BA4D1E1 1349 aa10.29□□□□□ -0.76
SF1-218ENST00000489544 CIAO1O76071 339 aa10.28□□□□□ -0.76
SF1-218ENST00000489544 SASH1O94885 1247 aa10.28□□□□□ -0.76
SF1-218ENST00000489544 PDE8BO95263 885 aa10.28□□□□□ -0.76
SF1-218ENST00000489544 IL15P40933 162 aaPredicted RBP10.28□□□□□ -0.76
SF1-218ENST00000489544 G3BP1Q13283 466 aaKnown RBP eCLIP10.28□□□□□ -0.767e-7■□□□□ 9.2
SF1-218ENST00000489544 DBNDD1Q9H9R9 158 aa10.28□□□□□ -0.76
SF1-218ENST00000489544 KCNQ5Q9NR82 932 aa10.28□□□□□ -0.76
SF1-218ENST00000489544 LEMD3Q9Y2U8 911 aa10.28□□□□□ -0.76
SF1-218ENST00000489544 MROH5Q6ZUA9 1318 aa10.28□□□□□ -0.76
SF1-218ENST00000489544 YDJCA8MPS7 323 aa10.27□□□□□ -0.77
SF1-218ENST00000489544 KIAA2012Q0VF49 1180 aa10.27□□□□□ -0.77
SF1-218ENST00000489544 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.77
SF1-218ENST00000489544 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.77
SF1-218ENST00000489544 SUPT20HQ8NEM7 779 aa10.27□□□□□ -0.77
SF1-218ENST00000489544 ZC3H12CQ9C0D7 883 aaKnown RBP10.27□□□□□ -0.77
SF1-218ENST00000489544 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
SF1-218ENST00000489544 NOP58Q9Y2X3 529 aaKnown RBP10.27□□□□□ -0.77
SF1-218ENST00000489544 IRS2Q9Y4H2 1338 aa10.27□□□□□ -0.77
SF1-218ENST00000489544 CHD4Q14839 1912 aa10.27□□□□□ -0.77
SF1-218ENST00000489544 SBF1O95248 1867 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 HMMRO75330 724 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 FGFR2P21802 821 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 ADORA1P30542 326 aa10.26□□□□□ -0.77
SF1-218ENST00000489544 GYG1P46976 350 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms