RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RTN1Q16799 776 aa20.12■□□□□ 0.81
NPHP4-209ENST00000489180 CEP112Q8N8E3 955 aa20.12■□□□□ 0.81
NPHP4-209ENST00000489180 DHX58Q96C10 678 aa20.12■□□□□ 0.81
NPHP4-209ENST00000489180 PUF60Q9UHX1 559 aaKnown RBP20.12■□□□□ 0.81
NPHP4-209ENST00000489180 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
NPHP4-209ENST00000489180 RSPH14Q9UHP6 348 aa20.12■□□□□ 0.81
NPHP4-209ENST00000489180 IFIT1BQ5T764 474 aaKnown RBP20.12■□□□□ 0.81
NPHP4-209ENST00000489180 CDC5LQ99459 802 aaKnown RBP20.12■□□□□ 0.81
NPHP4-209ENST00000489180 SAMM50Q9Y512 469 aa20.12■□□□□ 0.81
NPHP4-209ENST00000489180 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
NPHP4-209ENST00000489180 SLF2Q8IX21 1173 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 APOBRQ0VD83 1088 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 SMC5Q8IY18 1101 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 CEP85Q6P2H3 762 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 TIGD1Q96MW7 591 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 CTAGE1Q96RT6 745 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 KRT23Q9C075 422 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 CYP7A1P22680 504 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 LMBR1LQ6UX01 489 aa20.11■□□□□ 0.81
NPHP4-209ENST00000489180 GRM8O00222 908 aa20.1■□□□□ 0.81
NPHP4-209ENST00000489180 UQCRFS1P1P0C7P4 283 aa20.1■□□□□ 0.81
NPHP4-209ENST00000489180 KARSQ15046 597 aaKnown RBP20.1■□□□□ 0.81
NPHP4-209ENST00000489180 HEATR3Q7Z4Q2 680 aa20.1■□□□□ 0.81
NPHP4-209ENST00000489180 CKAP4Q07065 602 aaKnown RBP20.1■□□□□ 0.81
NPHP4-209ENST00000489180 WDR78Q5VTH9 848 aa20.1■□□□□ 0.81
NPHP4-209ENST00000489180 EHMT1Q9H9B1 1298 aa20.1■□□□□ 0.81
NPHP4-209ENST00000489180 SLU7O95391 586 aaKnown RBP20.1■□□□□ 0.81
NPHP4-209ENST00000489180 SPTLC2O15270 562 aa20.1■□□□□ 0.81
NPHP4-209ENST00000489180 BAG3O95817 575 aa20.1■□□□□ 0.81
NPHP4-209ENST00000489180 CYLC1P35663 651 aaPredicted RBP20.1■□□□□ 0.81
NPHP4-209ENST00000489180 IGSF3O75054 1194 aa20.09■□□□□ 0.81
NPHP4-209ENST00000489180 STX17P56962 302 aa20.09■□□□□ 0.81
NPHP4-209ENST00000489180 CRNKL1Q9BZJ0 848 aaKnown RBP20.09■□□□□ 0.81
NPHP4-209ENST00000489180 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.09■□□□□ 0.81
NPHP4-209ENST00000489180 EXOC5O00471 708 aa20.09■□□□□ 0.81
NPHP4-209ENST00000489180 CAPZA3Q96KX2 299 aa20.09■□□□□ 0.81
NPHP4-209ENST00000489180 CUL7Q14999 1698 aa20.09■□□□□ 0.81
NPHP4-209ENST00000489180 ATP2B3Q16720 1220 aa20.09■□□□□ 0.81
NPHP4-209ENST00000489180 PLEKHM2Q8IWE5 1019 aa20.09■□□□□ 0.81
NPHP4-209ENST00000489180 CCDC97Q96F63 343 aaPredicted RBP20.09■□□□□ 0.81
NPHP4-209ENST00000489180 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.81
NPHP4-209ENST00000489180 TSPY3P0CV98 308 aa20.08■□□□□ 0.81
NPHP4-209ENST00000489180 TSPY8P0CW00 308 aa20.08■□□□□ 0.81
NPHP4-209ENST00000489180 KIAA0753Q2KHM9 967 aa20.08■□□□□ 0.81
NPHP4-209ENST00000489180 SLC9C2Q5TAH2 1124 aa20.08■□□□□ 0.81
NPHP4-209ENST00000489180 GIGYF2Q6Y7W6 1299 aaKnown RBP20.08■□□□□ 0.81
NPHP4-209ENST00000489180 TBCAO75347 108 aaKnown RBP20.08■□□□□ 0.81
NPHP4-209ENST00000489180 NBPF7P0C2Y1 421 aaPredicted RBP20.08■□□□□ 0.81
NPHP4-209ENST00000489180 CPA1P15085 419 aa20.08■□□□□ 0.81
NPHP4-209ENST00000489180 CREB3L3Q68CJ9 461 aa20.08■□□□□ 0.81
NPHP4-209ENST00000489180 SPECC1LQ69YQ0 1117 aa20.08■□□□□ 0.8
NPHP4-209ENST00000489180 FERMT2Q96AC1 680 aa20.08■□□□□ 0.8
NPHP4-209ENST00000489180 SPAG5Q96R06 1193 aa20.08■□□□□ 0.8
NPHP4-209ENST00000489180 FSD2A1L4K1 749 aa20.08■□□□□ 0.8
NPHP4-209ENST00000489180 NF2P35240 595 aa20.08■□□□□ 0.8
NPHP4-209ENST00000489180 LZTFL1Q9NQ48 299 aa20.08■□□□□ 0.8
NPHP4-209ENST00000489180 PAG1Q9NWQ8 432 aa20.08■□□□□ 0.8
NPHP4-209ENST00000489180 ARID5AQ03989 594 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 MNAT1P51948 309 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 IFNKQ9P0W0 207 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 SYT10Q6XYQ8 523 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 LDHCP07864 332 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 ZFYP08048 801 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-209ENST00000489180 RXRAP19793 462 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 CTAGE9A4FU28 777 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 ASIC1P78348 528 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
NPHP4-209ENST00000489180 ESR2Q92731 530 aa20.07■□□□□ 0.8
NPHP4-209ENST00000489180 KSR2Q6VAB6 950 aa20.06■□□□□ 0.8
NPHP4-209ENST00000489180 MTHFSDQ2M296 383 aaKnown RBP20.06■□□□□ 0.8
NPHP4-209ENST00000489180 TEX13AQ9BXU3 409 aaPredicted RBP20.06■□□□□ 0.8
NPHP4-209ENST00000489180 CWF19L2Q2TBE0 894 aaKnown RBP20.06■□□□□ 0.8
NPHP4-209ENST00000489180 FEZ1Q99689 392 aa20.06■□□□□ 0.8
NPHP4-209ENST00000489180 PTPRKQ15262 1439 aa20.06■□□□□ 0.8
NPHP4-209ENST00000489180 VAMP4O75379 141 aa20.06■□□□□ 0.8
NPHP4-209ENST00000489180 STXBP4Q6ZWJ1 553 aa20.06■□□□□ 0.8
NPHP4-209ENST00000489180 LRRC27Q9C0I9 530 aa20.06■□□□□ 0.8
NPHP4-209ENST00000489180 ZBTB40Q9NUA8 1239 aa20.06■□□□□ 0.8
NPHP4-209ENST00000489180 RGS22Q8NE09 1264 aa20.05■□□□□ 0.8
NPHP4-209ENST00000489180 USP26Q9BXU7 913 aa20.05■□□□□ 0.8
NPHP4-209ENST00000489180 PTPDC1A2A3K4 754 aa20.05■□□□□ 0.8
NPHP4-209ENST00000489180 IFI16Q16666 785 aaKnown RBP20.05■□□□□ 0.8
NPHP4-209ENST00000489180 GOLGA1Q92805 767 aa20.05■□□□□ 0.8
NPHP4-209ENST00000489180 TERF1P54274 439 aa20.05■□□□□ 0.8
NPHP4-209ENST00000489180 PAIP2Q9BPZ3 127 aaKnown RBP20.05■□□□□ 0.8
NPHP4-209ENST00000489180 CNNM2Q9H8M5 875 aa20.05■□□□□ 0.8
NPHP4-209ENST00000489180 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
NPHP4-209ENST00000489180 RUFY3Q7L099 469 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 HOMER2Q9NSB8 354 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 SERPINA10Q9UK55 444 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 GUCA1BQ9UMX6 200 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 STAMBPO95630 424 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 CHMLP26374 656 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 ALDH1L1O75891 902 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 RHOXF2BP0C7M4 288 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 BICD1Q96G01 975 aa20.04■□□□□ 0.8
NPHP4-209ENST00000489180 RHOXF2Q9BQY4 288 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms