RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 LMNB1P20700 586 aa19.88■□□□□ 0.77
HDAC7-224ENST00000488927 RFX5P48382 616 aaPredicted RBP19.88■□□□□ 0.77
HDAC7-224ENST00000488927 ATP8B2P98198 1209 aa19.88■□□□□ 0.77
HDAC7-224ENST00000488927 AAMPQ13685 434 aa19.88■□□□□ 0.77
HDAC7-224ENST00000488927 ZNF594Q96JF6 807 aaPredicted RBP19.88■□□□□ 0.77
HDAC7-224ENST00000488927 C1orf115Q9H7X2 142 aa19.88■□□□□ 0.77
HDAC7-224ENST00000488927 TAF1P21675 1872 aa19.88■□□□□ 0.77
HDAC7-224ENST00000488927 COL4A1P02462 1669 aa19.87■□□□□ 0.77
HDAC7-224ENST00000488927 GPSM2P81274 684 aa19.87■□□□□ 0.77
HDAC7-224ENST00000488927 PTPN12Q05209 780 aaKnown RBP19.87■□□□□ 0.77
HDAC7-224ENST00000488927 RPAP2Q8IXW5 612 aaPredicted RBP19.87■□□□□ 0.77
HDAC7-224ENST00000488927 COPRSQ9NQ92 184 aa19.87■□□□□ 0.77
HDAC7-224ENST00000488927 UTRNP46939 3433 aa19.87■□□□□ 0.77
HDAC7-224ENST00000488927 FER1L6Q2WGJ9 1857 aa19.86■□□□□ 0.77
HDAC7-224ENST00000488927 MROH5Q6ZUA9 1318 aa19.86■□□□□ 0.77
HDAC7-224ENST00000488927 ATP2B4P23634 1241 aa19.86■□□□□ 0.77
HDAC7-224ENST00000488927 RASSF7Q02833 373 aa19.86■□□□□ 0.77
HDAC7-224ENST00000488927 EYA3Q99504 573 aa19.86■□□□□ 0.77
HDAC7-224ENST00000488927 GGA1Q9UJY5 639 aa19.86■□□□□ 0.77
HDAC7-224ENST00000488927 EYA2O00167 538 aa19.85■□□□□ 0.77
HDAC7-224ENST00000488927 CIAO1O76071 339 aa19.85■□□□□ 0.77
HDAC7-224ENST00000488927 CHRNDQ07001 517 aa19.85■□□□□ 0.77
HDAC7-224ENST00000488927 CEP85Q6P2H3 762 aa19.85■□□□□ 0.77
HDAC7-224ENST00000488927 SSH3Q8TE77 659 aa19.85■□□□□ 0.77
HDAC7-224ENST00000488927 LEMD3Q9Y2U8 911 aa19.85■□□□□ 0.77
HDAC7-224ENST00000488927 PNMA6EA0A0J9YXQ4 647 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 C6orf229H3BNL8 230 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 HMMRO75330 724 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 IARSP41252 1262 aaKnown RBP19.84■□□□□ 0.77
HDAC7-224ENST00000488927 POLA2Q14181 598 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 KLHDC4Q8TBB5 520 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 TBC1D16Q8TBP0 767 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 CRBNQ96SW2 442 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 RIPOR2Q9Y4F9 1068 aa19.84■□□□□ 0.77
HDAC7-224ENST00000488927 ZC3H4Q9UPT8 1303 aaKnown RBP19.83■□□□□ 0.77
HDAC7-224ENST00000488927 UFL1O94874 794 aa19.83■□□□□ 0.77
HDAC7-224ENST00000488927 IL15P40933 162 aaPredicted RBP19.83■□□□□ 0.77
HDAC7-224ENST00000488927 C9orf131Q5VYM1 1079 aa19.83■□□□□ 0.77
HDAC7-224ENST00000488927 SLC51AQ86UW1 340 aa19.83■□□□□ 0.77
HDAC7-224ENST00000488927 PUS3Q9BZE2 481 aaKnown RBP19.83■□□□□ 0.77
HDAC7-224ENST00000488927 ZNF277Q9NRM2 450 aaPredicted RBP19.83■□□□□ 0.77
HDAC7-224ENST00000488927 RNF181Q9P0P0 153 aa19.83■□□□□ 0.77
HDAC7-224ENST00000488927 KCNJ4P48050 445 aa19.82■□□□□ 0.76
HDAC7-224ENST00000488927 WASHC4Q2M389 1173 aa19.82■□□□□ 0.76
HDAC7-224ENST00000488927 LRRC24Q50LG9 513 aa19.82■□□□□ 0.76
HDAC7-224ENST00000488927 METTL24Q5JXM2 366 aa19.82■□□□□ 0.76
HDAC7-224ENST00000488927 JDP2Q8WYK2 163 aa19.82■□□□□ 0.76
HDAC7-224ENST00000488927 POLLQ9UGP5 575 aa19.82■□□□□ 0.76
HDAC7-224ENST00000488927 ZNF804BA4D1E1 1349 aa19.81■□□□□ 0.76
HDAC7-224ENST00000488927 PPIP5K2O43314 1243 aa19.81■□□□□ 0.76
HDAC7-224ENST00000488927 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
HDAC7-224ENST00000488927 LARGE2Q8N3Y3 721 aa19.81■□□□□ 0.76
HDAC7-224ENST00000488927 ZC3H12CQ9C0D7 883 aaKnown RBP19.81■□□□□ 0.76
HDAC7-224ENST00000488927 SIL1Q9H173 461 aa19.81■□□□□ 0.76
HDAC7-224ENST00000488927 SPEF2Q9C093 1822 aa19.81■□□□□ 0.76
HDAC7-224ENST00000488927 LTBP1Q14766 1721 aa19.8■□□□□ 0.76
HDAC7-224ENST00000488927 DUOX1Q9NRD9 1551 aa19.8■□□□□ 0.76
HDAC7-224ENST00000488927 G3BP1Q13283 466 aaKnown RBP eCLIP19.8■□□□□ 0.76
HDAC7-224ENST00000488927 PA2G4Q9UQ80 394 aaKnown RBP19.8■□□□□ 0.76
HDAC7-224ENST00000488927 PDE8BO95263 885 aa19.79■□□□□ 0.76
HDAC7-224ENST00000488927 PRELPP51888 382 aa19.79■□□□□ 0.76
HDAC7-224ENST00000488927 UBE4AQ14139 1066 aa19.79■□□□□ 0.76
HDAC7-224ENST00000488927 ATG9AQ7Z3C6 839 aa19.79■□□□□ 0.76
HDAC7-224ENST00000488927 HELBQ8NG08 1087 aaPredicted RBP19.79■□□□□ 0.76
HDAC7-224ENST00000488927 CEP126Q9P2H0 1117 aa19.79■□□□□ 0.76
HDAC7-224ENST00000488927 NOP58Q9Y2X3 529 aaKnown RBP19.79■□□□□ 0.76
HDAC7-224ENST00000488927 MED23Q9ULK4 1368 aa19.79■□□□□ 0.76
HDAC7-224ENST00000488927 TAF5LO75529 589 aa19.78■□□□□ 0.76
HDAC7-224ENST00000488927 AOC3Q16853 763 aa19.78■□□□□ 0.76
HDAC7-224ENST00000488927 HSP90AB4PQ58FF6 505 aa19.78■□□□□ 0.76
HDAC7-224ENST00000488927 NIM1KQ8IY84 436 aa19.78■□□□□ 0.76
HDAC7-224ENST00000488927 SURF6O75683 361 aaKnown RBP19.77■□□□□ 0.76
HDAC7-224ENST00000488927 PUM3Q15397 648 aaKnown RBP19.77■□□□□ 0.76
HDAC7-224ENST00000488927 C15orf52Q6ZUT6 534 aaKnown RBP19.77■□□□□ 0.76
HDAC7-224ENST00000488927 VGLL2Q8N8G2 317 aa19.77■□□□□ 0.76
HDAC7-224ENST00000488927 CHD4Q14839 1912 aa19.76■□□□□ 0.75
HDAC7-224ENST00000488927 SBF1O95248 1867 aa19.76■□□□□ 0.75
HDAC7-224ENST00000488927 G3V3G9 751 aa19.76■□□□□ 0.75
HDAC7-224ENST00000488927 OS9Q13438 667 aaPredicted RBP19.76■□□□□ 0.75
HDAC7-224ENST00000488927 DCAF8Q5TAQ9 597 aa19.76■□□□□ 0.75
HDAC7-224ENST00000488927 ERC1Q8IUD2 1116 aa19.76■□□□□ 0.75
HDAC7-224ENST00000488927 RIMBP2O15034 1052 aa19.75■□□□□ 0.75
HDAC7-224ENST00000488927 SIRT2Q8IXJ6 389 aa19.75■□□□□ 0.75
HDAC7-224ENST00000488927 ZNRF3Q9ULT6 936 aa19.75■□□□□ 0.75
HDAC7-224ENST00000488927 AKAP2Q9Y2D5 859 aa19.75■□□□□ 0.75
HDAC7-224ENST00000488927 FZD9O00144 591 aa19.74■□□□□ 0.75
HDAC7-224ENST00000488927 IFIT1P09914 478 aaKnown RBP19.74■□□□□ 0.75
HDAC7-224ENST00000488927 EIF6P56537 245 aaKnown RBP19.74■□□□□ 0.75
HDAC7-224ENST00000488927 EXOC6Q8TAG9 804 aa19.74■□□□□ 0.75
HDAC7-224ENST00000488927 LPIN2Q92539 896 aa19.74■□□□□ 0.75
HDAC7-224ENST00000488927 COA1Q9GZY4 146 aa19.74■□□□□ 0.75
HDAC7-224ENST00000488927 SLC5A1P13866 664 aa19.73■□□□□ 0.75
HDAC7-224ENST00000488927 DPY19L2Q6NUT2 758 aa19.73■□□□□ 0.75
HDAC7-224ENST00000488927 ZNF804AQ7Z570 1209 aa19.73■□□□□ 0.75
HDAC7-224ENST00000488927 PODNQ7Z5L7 613 aa19.73■□□□□ 0.75
HDAC7-224ENST00000488927 GPR101Q96P66 508 aaPredicted RBP19.73■□□□□ 0.75
HDAC7-224ENST00000488927 DICER1Q9UPY3 1922 aaKnown RBP19.72■□□□□ 0.75
HDAC7-224ENST00000488927 RAB11FIP3O75154 756 aa19.72■□□□□ 0.75
HDAC7-224ENST00000488927 FGFR2P21802 821 aa19.72■□□□□ 0.75
HDAC7-224ENST00000488927 YY1P25490 414 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms