RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 MCTP1Q6DN14 999 aa22.14■■□□□ 1.13
COL16A1-215ENST00000488897 SGIP1Q9BQI5 828 aa22.14■■□□□ 1.13
COL16A1-215ENST00000488897 HMGB2P26583 209 aaKnown RBP22.13■■□□□ 1.13
COL16A1-215ENST00000488897 COL4A1P02462 1669 aa22.13■■□□□ 1.13
COL16A1-215ENST00000488897 AK9Q5TCS8 1911 aa22.13■■□□□ 1.13
COL16A1-215ENST00000488897 SLC16A10Q8TF71 515 aa22.12■■□□□ 1.13
COL16A1-215ENST00000488897 QSER1Q2KHR3 1735 aa22.12■■□□□ 1.13
COL16A1-215ENST00000488897 PXDNLA1KZ92 1463 aa22.12■■□□□ 1.13
COL16A1-215ENST00000488897 LRRCC1Q9C099 1032 aa22.12■■□□□ 1.13
COL16A1-215ENST00000488897 GREM2Q9H772 168 aa22.12■■□□□ 1.13
COL16A1-215ENST00000488897 PA2G4Q9UQ80 394 aaKnown RBP22.12■■□□□ 1.13
COL16A1-215ENST00000488897 A0A0G2JLW4 131 aa22.11■■□□□ 1.13
COL16A1-215ENST00000488897 CCDC173Q0VFZ6 552 aa22.11■■□□□ 1.13
COL16A1-215ENST00000488897 ANP32BQ92688 251 aaKnown RBP22.11■■□□□ 1.13
COL16A1-215ENST00000488897 LMBRD1Q9NUN5 540 aa22.11■■□□□ 1.13
COL16A1-215ENST00000488897 ZNF445P59923 1031 aa22.1■■□□□ 1.13
COL16A1-215ENST00000488897 ATP8B2P98198 1209 aa22.1■■□□□ 1.13
COL16A1-215ENST00000488897 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
COL16A1-215ENST00000488897 SALL3Q9BXA9 1300 aa22.1■■□□□ 1.13
COL16A1-215ENST00000488897 NASPP49321 788 aaPredicted RBP22.1■■□□□ 1.13
COL16A1-215ENST00000488897 MCM2P49736 904 aa22.1■■□□□ 1.13
COL16A1-215ENST00000488897 OLFM4Q6UX06 510 aa22.1■■□□□ 1.13
COL16A1-215ENST00000488897 EXOC6BQ9Y2D4 811 aa22.1■■□□□ 1.13
COL16A1-215ENST00000488897 TTLL11Q8NHH1 800 aa22.09■■□□□ 1.13
COL16A1-215ENST00000488897 SIL1Q9H173 461 aa22.09■■□□□ 1.13
COL16A1-215ENST00000488897 TNRC6CQ9HCJ0 1690 aaKnown RBP22.09■■□□□ 1.13
COL16A1-215ENST00000488897 UTYO14607 1347 aa22.09■■□□□ 1.13
COL16A1-215ENST00000488897 POLD1P28340 1107 aa22.09■■□□□ 1.13
COL16A1-215ENST00000488897 SPON1Q9HCB6 807 aa22.09■■□□□ 1.13
COL16A1-215ENST00000488897 MCCP23508 829 aa22.08■■□□□ 1.13
COL16A1-215ENST00000488897 ZGPATQ8N5A5 531 aaKnown RBP22.08■■□□□ 1.13
COL16A1-215ENST00000488897 NLGN2Q8NFZ4 835 aa22.08■■□□□ 1.13
COL16A1-215ENST00000488897 PPP1R9BQ96SB3 815 aa22.08■■□□□ 1.13
COL16A1-215ENST00000488897 NYXQ9GZU5 481 aa22.08■■□□□ 1.13
COL16A1-215ENST00000488897 MX1P20591 662 aa22.08■■□□□ 1.12
COL16A1-215ENST00000488897 ST5P78524 1137 aa22.08■■□□□ 1.12
COL16A1-215ENST00000488897 ESYT1Q9BSJ8 1104 aa22.08■■□□□ 1.12
COL16A1-215ENST00000488897 SRGAP3O43295 1099 aa22.07■■□□□ 1.12
COL16A1-215ENST00000488897 CTSWP56202 376 aa22.07■■□□□ 1.12
COL16A1-215ENST00000488897 PKP1Q13835 747 aa22.07■■□□□ 1.12
COL16A1-215ENST00000488897 WTIPA6NIX2 430 aaPredicted RBP22.07■■□□□ 1.12
COL16A1-215ENST00000488897 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
COL16A1-215ENST00000488897 DDX60Q8IY21 1712 aaKnown RBP22.07■■□□□ 1.12
COL16A1-215ENST00000488897 PDE8AO60658 829 aa22.06■■□□□ 1.12
COL16A1-215ENST00000488897 NLRP3Q96P20 1036 aa22.06■■□□□ 1.12
COL16A1-215ENST00000488897 NCLP19338 710 aaKnown RBP22.06■■□□□ 1.12
COL16A1-215ENST00000488897 NEK4P51957 841 aa22.06■■□□□ 1.12
COL16A1-215ENST00000488897 ANAPC15P60006 121 aa22.06■■□□□ 1.12
COL16A1-215ENST00000488897 PUS3Q9BZE2 481 aaKnown RBP22.06■■□□□ 1.12
COL16A1-215ENST00000488897 STAP2Q9UGK3 403 aa22.06■■□□□ 1.12
COL16A1-215ENST00000488897 CELF1Q92879 486 aaKnown RBP22.05■■□□□ 1.12
COL16A1-215ENST00000488897 ZNF622Q969S3 477 aaKnown RBP eCLIP22.05■■□□□ 1.12
COL16A1-215ENST00000488897 NAP1L5Q96NT1 182 aaPredicted RBP22.05■■□□□ 1.12
COL16A1-215ENST00000488897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.05■■□□□ 1.12
COL16A1-215ENST00000488897 ITGA6P23229 1130 aa22.05■■□□□ 1.12
COL16A1-215ENST00000488897 CAVIN1Q6NZI2 390 aaKnown RBP22.05■■□□□ 1.12
COL16A1-215ENST00000488897 ZDHHC9Q9Y397 364 aa22.05■■□□□ 1.12
COL16A1-215ENST00000488897 ANKRD31Q8N7Z5 1873 aa22.04■■□□□ 1.12
COL16A1-215ENST00000488897 FHDC1Q9C0D6 1143 aaPredicted RBP22.04■■□□□ 1.12
COL16A1-215ENST00000488897 ZSCAN23Q3MJ62 389 aa22.04■■□□□ 1.12
COL16A1-215ENST00000488897 N4BP2Q86UW6 1770 aaPredicted RBP22.03■■□□□ 1.12
COL16A1-215ENST00000488897 SNAP23O00161 211 aa22.03■■□□□ 1.12
COL16A1-215ENST00000488897 DPEP1P16444 411 aa22.03■■□□□ 1.12
COL16A1-215ENST00000488897 CHMLP26374 656 aa22.03■■□□□ 1.12
COL16A1-215ENST00000488897 SLC10A5Q5PT55 438 aa22.03■■□□□ 1.12
COL16A1-215ENST00000488897 TMX3Q96JJ7 454 aa22.03■■□□□ 1.12
COL16A1-215ENST00000488897 CDHR2Q9BYE9 1310 aa22.03■■□□□ 1.12
COL16A1-215ENST00000488897 PRPF40AO75400 957 aaKnown RBP22.02■■□□□ 1.12
COL16A1-215ENST00000488897 C2CD5Q86YS7 1000 aa22.02■■□□□ 1.12
COL16A1-215ENST00000488897 AOX1Q06278 1338 aa22.02■■□□□ 1.12
COL16A1-215ENST00000488897 BRIP1Q9BX63 1249 aa22.02■■□□□ 1.12
COL16A1-215ENST00000488897 TRIM6-TRIM34B2RNG4 842 aa22.01■■□□□ 1.11
COL16A1-215ENST00000488897 EPB41L2O43491 1005 aaKnown RBP22.01■■□□□ 1.11
COL16A1-215ENST00000488897 CSF1RP07333 972 aa22.01■■□□□ 1.11
COL16A1-215ENST00000488897 LRRC24Q50LG9 513 aa22.01■■□□□ 1.11
COL16A1-215ENST00000488897 TSHZ3Q63HK5 1081 aa22.01■■□□□ 1.11
COL16A1-215ENST00000488897 HELBQ8NG08 1087 aaPredicted RBP22.01■■□□□ 1.11
COL16A1-215ENST00000488897 RILPL2Q969X0 211 aa22.01■■□□□ 1.11
COL16A1-215ENST00000488897 RGL2O15211 777 aa22■■□□□ 1.11
COL16A1-215ENST00000488897 CUL4AQ13619 759 aa22■■□□□ 1.11
COL16A1-215ENST00000488897 IL17RAQ96F46 866 aa22■■□□□ 1.11
COL16A1-215ENST00000488897 LAMB2P55268 1798 aa22■■□□□ 1.11
COL16A1-215ENST00000488897 SRGNP10124 158 aa22■■□□□ 1.11
COL16A1-215ENST00000488897 INTS4Q96HW7 963 aaKnown RBP22■■□□□ 1.11
COL16A1-215ENST00000488897 KCNA3P22001 575 aa21.99■■□□□ 1.11
COL16A1-215ENST00000488897 RABL6Q3YEC7 729 aaPredicted RBP21.99■■□□□ 1.11
COL16A1-215ENST00000488897 ANO2Q9NQ90 1003 aa21.99■■□□□ 1.11
COL16A1-215ENST00000488897 RFX5P48382 616 aaPredicted RBP21.99■■□□□ 1.11
COL16A1-215ENST00000488897 RPGRQ92834 1020 aaKnown RBP21.99■■□□□ 1.11
COL16A1-215ENST00000488897 NRXN2Q9P2S2 1712 aa21.98■■□□□ 1.11
COL16A1-215ENST00000488897 RAB11FIP3O75154 756 aa21.98■■□□□ 1.11
COL16A1-215ENST00000488897 PTPN12Q05209 780 aaKnown RBP21.98■■□□□ 1.11
COL16A1-215ENST00000488897 CCDC57Q2TAC2 916 aa21.98■■□□□ 1.11
COL16A1-215ENST00000488897 PLA2G12BQ9BX93 195 aa21.98■■□□□ 1.11
COL16A1-215ENST00000488897 IFIT5Q13325 482 aaKnown RBP21.98■■□□□ 1.11
COL16A1-215ENST00000488897 GPT2Q8TD30 523 aa21.98■■□□□ 1.11
COL16A1-215ENST00000488897 SSH3Q8TE77 659 aa21.98■■□□□ 1.11
COL16A1-215ENST00000488897 CCDC152Q4G0S7 254 aa21.97■■□□□ 1.11
COL16A1-215ENST00000488897 TAF5LO75529 589 aa21.97■■□□□ 1.11
COL16A1-215ENST00000488897 SURF6O75683 361 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms