RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 FTSJ3Q8IY81 847 aaKnown RBP23.42■■□□□ 1.34
PTCD3-217ENST00000488801 SUPT20HQ8NEM7 779 aa23.42■■□□□ 1.34
PTCD3-217ENST00000488801 POLLQ9UGP5 575 aa23.42■■□□□ 1.34
PTCD3-217ENST00000488801 RFX5P48382 616 aaPredicted RBP23.41■■□□□ 1.34
PTCD3-217ENST00000488801 KIAA2012Q0VF49 1180 aa23.41■■□□□ 1.34
PTCD3-217ENST00000488801 CCDC57Q2TAC2 916 aa23.41■■□□□ 1.34
PTCD3-217ENST00000488801 TBC1D16Q8TBP0 767 aa23.41■■□□□ 1.34
PTCD3-217ENST00000488801 CHMP3Q9Y3E7 222 aa23.41■■□□□ 1.34
PTCD3-217ENST00000488801 LRRFIP2Q9Y608 721 aaKnown RBP23.41■■□□□ 1.34
PTCD3-217ENST00000488801 MTX1Q13505 466 aa23.4■■□□□ 1.34
PTCD3-217ENST00000488801 PANK1Q8TE04 598 aa23.4■■□□□ 1.34
PTCD3-217ENST00000488801 NSFL1CQ9UNZ2 370 aaKnown RBP23.4■■□□□ 1.34
PTCD3-217ENST00000488801 FZD9O00144 591 aa23.39■■□□□ 1.33
PTCD3-217ENST00000488801 ZNF594Q96JF6 807 aaPredicted RBP23.39■■□□□ 1.33
PTCD3-217ENST00000488801 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.33
PTCD3-217ENST00000488801 MS4A1P11836 297 aa23.38■■□□□ 1.33
PTCD3-217ENST00000488801 AOC3Q16853 763 aa23.38■■□□□ 1.33
PTCD3-217ENST00000488801 MPHOSPH8Q99549 860 aa23.38■■□□□ 1.33
PTCD3-217ENST00000488801 MED23Q9ULK4 1368 aa23.38■■□□□ 1.33
PTCD3-217ENST00000488801 ADAMTSL1Q8N6G6 1762 aa23.37■■□□□ 1.33
PTCD3-217ENST00000488801 IRS2Q9Y4H2 1338 aa23.37■■□□□ 1.33
PTCD3-217ENST00000488801 ZBTB7BO15156 539 aaPredicted RBP23.37■■□□□ 1.33
PTCD3-217ENST00000488801 PPIP5K2O43314 1243 aa23.37■■□□□ 1.33
PTCD3-217ENST00000488801 PLIN1O60240 522 aa23.37■■□□□ 1.33
PTCD3-217ENST00000488801 ZNF541Q9H0D2 1346 aa23.36■■□□□ 1.33
PTCD3-217ENST00000488801 UFL1O94874 794 aa23.36■■□□□ 1.33
PTCD3-217ENST00000488801 CHRNDQ07001 517 aa23.36■■□□□ 1.33
PTCD3-217ENST00000488801 ITPRIPQ8IWB1 547 aa23.36■■□□□ 1.33
PTCD3-217ENST00000488801 LARGE2Q8N3Y3 721 aa23.36■■□□□ 1.33
PTCD3-217ENST00000488801 GGA1Q9UJY5 639 aa23.36■■□□□ 1.33
PTCD3-217ENST00000488801 GLTPD2A6NH11 291 aa23.35■■□□□ 1.33
PTCD3-217ENST00000488801 PTPN12Q05209 780 aaKnown RBP23.35■■□□□ 1.33
PTCD3-217ENST00000488801 PDE3AQ14432 1141 aa23.35■■□□□ 1.33
PTCD3-217ENST00000488801 MVPQ14764 893 aaKnown RBP23.35■■□□□ 1.33
PTCD3-217ENST00000488801 ANKRD2Q9GZV1 360 aa23.35■■□□□ 1.33
PTCD3-217ENST00000488801 ANKIB1Q9P2G1 1089 aa23.35■■□□□ 1.33
PTCD3-217ENST00000488801 RIPOR2Q9Y4F9 1068 aa23.35■■□□□ 1.33
PTCD3-217ENST00000488801 WTIPA6NIX2 430 aaPredicted RBP23.34■■□□□ 1.33
PTCD3-217ENST00000488801 GNAI2P04899 355 aa23.34■■□□□ 1.33
PTCD3-217ENST00000488801 ATP2B4P23634 1241 aa23.34■■□□□ 1.33
PTCD3-217ENST00000488801 LDHAL6AQ6ZMR3 332 aa23.34■■□□□ 1.33
PTCD3-217ENST00000488801 GPR101Q96P66 508 aaPredicted RBP23.34■■□□□ 1.33
PTCD3-217ENST00000488801 EYA3Q99504 573 aa23.34■■□□□ 1.33
PTCD3-217ENST00000488801 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
PTCD3-217ENST00000488801 WASHC4Q2M389 1173 aa23.33■■□□□ 1.33
PTCD3-217ENST00000488801 C20orf194Q5TEA3 1177 aa23.33■■□□□ 1.33
PTCD3-217ENST00000488801 VGLL2Q8N8G2 317 aa23.33■■□□□ 1.33
PTCD3-217ENST00000488801 KLHDC4Q8TBB5 520 aa23.33■■□□□ 1.33
PTCD3-217ENST00000488801 JDP2Q8WYK2 163 aa23.33■■□□□ 1.33
PTCD3-217ENST00000488801 LEMD3Q9Y2U8 911 aa23.33■■□□□ 1.33
PTCD3-217ENST00000488801 C6orf229H3BNL8 230 aa23.32■■□□□ 1.32
PTCD3-217ENST00000488801 TAF7LQ5H9L4 462 aa23.32■■□□□ 1.32
PTCD3-217ENST00000488801 NIM1KQ8IY84 436 aa23.32■■□□□ 1.32
PTCD3-217ENST00000488801 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.32■■□□□ 1.32
PTCD3-217ENST00000488801 ZNF609O15014 1411 aa23.32■■□□□ 1.32
PTCD3-217ENST00000488801 KDM2BQ8NHM5 1336 aa23.32■■□□□ 1.32
PTCD3-217ENST00000488801 YDJCA8MPS7 323 aa23.31■■□□□ 1.32
PTCD3-217ENST00000488801 LRRC24Q50LG9 513 aa23.31■■□□□ 1.32
PTCD3-217ENST00000488801 C15orf52Q6ZUT6 534 aaKnown RBP23.31■■□□□ 1.32
PTCD3-217ENST00000488801 L3MBTL3Q96JM7 780 aaPredicted RBP23.31■■□□□ 1.32
PTCD3-217ENST00000488801 COPRSQ9NQ92 184 aa23.31■■□□□ 1.32
PTCD3-217ENST00000488801 CNNM1Q9NRU3 951 aa23.31■■□□□ 1.32
PTCD3-217ENST00000488801 FBXO3Q9UK99 471 aa23.31■■□□□ 1.32
PTCD3-217ENST00000488801 ZNF804BA4D1E1 1349 aa23.31■■□□□ 1.32
PTCD3-217ENST00000488801 ZNRF3Q9ULT6 936 aa23.3■■□□□ 1.32
PTCD3-217ENST00000488801 DDX19BQ9UMR2 479 aa23.3■■□□□ 1.32
PTCD3-217ENST00000488801 COG6Q9Y2V7 657 aa23.3■■□□□ 1.32
PTCD3-217ENST00000488801 MROH5Q6ZUA9 1318 aa23.3■■□□□ 1.32
PTCD3-217ENST00000488801 EYA2O00167 538 aa23.29■■□□□ 1.32
PTCD3-217ENST00000488801 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
PTCD3-217ENST00000488801 ATG9AQ7Z3C6 839 aa23.29■■□□□ 1.32
PTCD3-217ENST00000488801 GPBP1L1Q9HC44 474 aaPredicted RBP23.29■■□□□ 1.32
PTCD3-217ENST00000488801 ECM29Q5VYK3 1845 aa23.29■■□□□ 1.32
PTCD3-217ENST00000488801 PNMA6EA0A0J9YXQ4 647 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 POTECB2RU33 542 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 TAF5LO75529 589 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 CIAO1O76071 339 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 KLRK1P26718 216 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 POLA2Q14181 598 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 TXNRD3Q86VQ6 643 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 GPC2Q8N158 579 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 NMRK2Q9NPI5 230 aa23.28■■□□□ 1.32
PTCD3-217ENST00000488801 KIF3CO14782 793 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 RIMBP2O15034 1052 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 SRGAP3O43295 1099 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 ECE2O60344 883 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 DDNO94850 711 aaPredicted RBP23.27■■□□□ 1.32
PTCD3-217ENST00000488801 DPY19L2Q6NUT2 758 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 HELBQ8NG08 1087 aaPredicted RBP23.27■■□□□ 1.32
PTCD3-217ENST00000488801 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
PTCD3-217ENST00000488801 ZC3H12CQ9C0D7 883 aaKnown RBP23.27■■□□□ 1.32
PTCD3-217ENST00000488801 C1orf115Q9H7X2 142 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 DBNDD1Q9H9R9 158 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 ZBTB40Q9NUA8 1239 aa23.27■■□□□ 1.32
PTCD3-217ENST00000488801 SNAP23O00161 211 aa23.26■■□□□ 1.31
PTCD3-217ENST00000488801 CXCL9Q07325 125 aa23.26■■□□□ 1.31
PTCD3-217ENST00000488801 SSH3Q8TE77 659 aa23.26■■□□□ 1.31
PTCD3-217ENST00000488801 POLR2AP24928 1970 aaKnown RBP23.26■■□□□ 1.31
PTCD3-217ENST00000488801 EIF6P56537 245 aaKnown RBP23.25■■□□□ 1.31
PTCD3-217ENST00000488801 UBE4AQ14139 1066 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms