RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-242	ENST00000488013	C2CD5	Q86YS7	1000 aa		13.61	□□□□□ -0.23
HDLBP-242	ENST00000488013	RHPN1	Q8TCX5	695 aa		13.61	□□□□□ -0.23
HDLBP-242	ENST00000488013	SGIP1	Q9BQI5	828 aa		13.61	□□□□□ -0.23
HDLBP-242	ENST00000488013	ANKRD2	Q9GZV1	360 aa		13.61	□□□□□ -0.23
HDLBP-242	ENST00000488013	CC2D2B	Q6DHV5	1058 aa		13.6	□□□□□ -0.23
HDLBP-242	ENST00000488013	C3orf67	Q6ZVT6	689 aa		13.6	□□□□□ -0.23
HDLBP-242	ENST00000488013	C10orf71	Q711Q0	1435 aa		13.6	□□□□□ -0.23
HDLBP-242	ENST00000488013	CCDC24	Q8N4L8	307 aa		13.6	□□□□□ -0.23
HDLBP-242	ENST00000488013	SIL1	Q9H173	461 aa		13.6	□□□□□ -0.23
HDLBP-242	ENST00000488013	PA2G4	Q9UQ80	394 aa	Known RBP	13.6	□□□□□ -0.23
HDLBP-242	ENST00000488013	RIPOR2	Q9Y4F9	1068 aa		13.6	□□□□□ -0.23
HDLBP-242	ENST00000488013	METTL24	Q5JXM2	366 aa		13.59	□□□□□ -0.23
HDLBP-242	ENST00000488013	GPATCH3	Q96I76	525 aa		13.59	□□□□□ -0.23
HDLBP-242	ENST00000488013	SEC31B	Q9NQW1	1179 aa		13.59	□□□□□ -0.23
HDLBP-242	ENST00000488013	PTGER2	P43116	358 aa		13.58	□□□□□ -0.24
HDLBP-242	ENST00000488013	ATG9A	Q7Z3C6	839 aa		13.58	□□□□□ -0.24
HDLBP-242	ENST00000488013	KLHDC4	Q8TBB5	520 aa		13.58	□□□□□ -0.24
HDLBP-242	ENST00000488013	ZNF594	Q96JF6	807 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-242	ENST00000488013	PDE8B	O95263	885 aa		13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	IFIT2	P09913	472 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	PUM3	Q15397	648 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	SOGA3	Q5TF21	947 aa		13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	SP8	Q8IXZ3	490 aa		13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	CELF1	Q92879	486 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	AFDN	P55196	1824 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-242	ENST00000488013	SASH1	O94885	1247 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	UBE4A	Q14139	1066 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	LRRC24	Q50LG9	513 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	PELP1	Q8IZL8	1130 aa	Known RBP	13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	TTLL6	Q8N841	843 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	LPIN2	Q92539	896 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	PIM2	Q9P1W9	311 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	MINPP1	Q9UNW1	487 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	LEMD3	Q9Y2U8	911 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	ATP6V0A2	Q9Y487	856 aa		13.56	□□□□□ -0.24
HDLBP-242	ENST00000488013	TUBGCP6	Q96RT7	1819 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	APBB1	O00213	710 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	PPEF1	O14829	653 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	IFIT1	P09914	478 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	CHRND	Q07001	517 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	TFCP2	Q12800	502 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	TNNI3K	Q59H18	835 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	AACS	Q86V21	672 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	PUS3	Q9BZE2	481 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	LNPK	Q9C0E8	428 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	FPGT-TNNI3K	V9GXZ4	949 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	XDH	P47989	1333 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	NRXN2	Q9P2S2	1712 aa		13.55	□□□□□ -0.24
HDLBP-242	ENST00000488013	CASZ1	Q86V15	1759 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	ERC2	O15083	957 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	SLC5A1	P13866	664 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	ATP2B4	P23634	1241 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	KCNJ4	P48050	445 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	ATP2B3	Q16720	1220 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	IL1RAPL2	Q9NP60	686 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	PODXL2	Q9NZ53	605 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	ANKIB1	Q9P2G1	1089 aa		13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-242	ENST00000488013	DPEP1	P16444	411 aa		13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	CHRNA5	P30532	468 aa		13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	DALRD3	Q5D0E6	543 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	GORAB	Q5T7V8	394 aa		13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	PRPF40B	Q6NWY9	871 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	RTKN2	Q8IZC4	609 aa		13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	VGLL2	Q8N8G2	317 aa		13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	AOX1	Q06278	1338 aa		13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013	TTC41P	Q6P2S7	1318 aa		13.53	□□□□□ -0.24
HDLBP-242	ENST00000488013		A0A1B0GUL7	405 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	MX1	P20591	662 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	CAVIN4	Q5BKX8	364 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	CCDC158	Q5M9N0	1113 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	SUPT20H	Q8NEM7	779 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	OSBPL3	Q9H4L5	887 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	ECHDC1	Q9NTX5	307 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	GNL3L	Q9NVN8	582 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	STAP2	Q9UGK3	403 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	GGA1	Q9UJY5	639 aa		13.52	□□□□□ -0.25
HDLBP-242	ENST00000488013	LAMB2	P55268	1798 aa		13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	ZNF804B	A4D1E1	1349 aa		13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013		A0A0G2JLW4	131 aa		13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	GLRX3	O76003	335 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	FGFR2	P21802	821 aa		13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	C15orf52	Q6ZUT6	534 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	MPND	Q8N594	471 aa		13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	EAF2	Q96CJ1	260 aa	Predicted RBP	13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	NEUROD6	Q96NK8	337 aa		13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-242	ENST00000488013	SPDYE2B	A6NHP3	402 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	SMARCA5	O60264	1052 aa	Predicted RBP	13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	UQCRFS1P1	P0C7P4	283 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	SPDYE6	P0CI01	402 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	KCNA3	P22001	575 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	SPDYE2	Q495Y8	402 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	CCDC93	Q567U6	631 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	DPP8	Q6V1X1	898 aa	Predicted RBP	13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	TICAM2	Q86XR7	235 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	KLHL34	Q8N239	644 aa		13.5	□□□□□ -0.25
HDLBP-242	ENST00000488013	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms