RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-208ENST00000487997 GOLGB1Q14789 3259 aaKnown RBP12.11□□□□□ -0.47
PTBP3-208ENST00000487997 ADCY9O60503 1353 aa12.11□□□□□ -0.47
PTBP3-208ENST00000487997 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
PTBP3-208ENST00000487997 HCLS1P14317 486 aaPredicted RBP12.11□□□□□ -0.47
PTBP3-208ENST00000487997 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
PTBP3-208ENST00000487997 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
PTBP3-208ENST00000487997 DNAAF4Q8WXU2 420 aa12.11□□□□□ -0.47
PTBP3-208ENST00000487997 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
PTBP3-208ENST00000487997 C21orf2O43822 256 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 ALDH1L2Q3SY69 923 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 CRY2Q49AN0 593 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
PTBP3-208ENST00000487997 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 KRTAP3-2Q9BYR7 98 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
PTBP3-208ENST00000487997 SMC4Q9NTJ3 1288 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
PTBP3-208ENST00000487997 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
PTBP3-208ENST00000487997 PCCAP05165 728 aaPredicted RBP12.09□□□□□ -0.47
PTBP3-208ENST00000487997 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
PTBP3-208ENST00000487997 SYNE4Q8N205 404 aa12.09□□□□□ -0.47
PTBP3-208ENST00000487997 MRPL50Q8N5N7 158 aaKnown RBP12.09□□□□□ -0.47
PTBP3-208ENST00000487997 PTPRCP08575 1304 aa12.09□□□□□ -0.47
PTBP3-208ENST00000487997 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
PTBP3-208ENST00000487997 HOXA10P31260 410 aaPredicted RBP12.08□□□□□ -0.48
PTBP3-208ENST00000487997 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
PTBP3-208ENST00000487997 SLC4A10Q6U841 1118 aa12.08□□□□□ -0.48
PTBP3-208ENST00000487997 DDX46Q7L014 1031 aaKnown RBP12.08□□□□□ -0.48
PTBP3-208ENST00000487997 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
PTBP3-208ENST00000487997 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
PTBP3-208ENST00000487997 CRAMP1Q96RY5 1269 aa12.08□□□□□ -0.48
PTBP3-208ENST00000487997 BCL2L13Q9BXK5 485 aa12.08□□□□□ -0.48
PTBP3-208ENST00000487997 SPEF2Q9C093 1822 aa12.08□□□□□ -0.48
PTBP3-208ENST00000487997 F6X3S4 739 aa12.07□□□□□ -0.48
PTBP3-208ENST00000487997 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
PTBP3-208ENST00000487997 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
PTBP3-208ENST00000487997 TMC2Q8TDI7 906 aa12.07□□□□□ -0.48
PTBP3-208ENST00000487997 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■■■□□ 16.5
PTBP3-208ENST00000487997 PDE8AO60658 829 aa12.06□□□□□ -0.48
PTBP3-208ENST00000487997 GCKRQ14397 625 aa12.06□□□□□ -0.48
PTBP3-208ENST00000487997 RTKN2Q8IZC4 609 aa12.06□□□□□ -0.48
PTBP3-208ENST00000487997 JARID2Q92833 1246 aaPredicted RBP12.06□□□□□ -0.48
PTBP3-208ENST00000487997 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
PTBP3-208ENST00000487997 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
PTBP3-208ENST00000487997 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
PTBP3-208ENST00000487997 BBOX1O75936 387 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
PTBP3-208ENST00000487997 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 GRIPAP1Q4V328 841 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
PTBP3-208ENST00000487997 CC2D2BQ6DHV5 1058 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 SRCIN1Q9C0H9 1055 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 TAOK3Q9H2K8 898 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
PTBP3-208ENST00000487997 RNF181Q9P0P0 153 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 ABCC4O15439 1325 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 UTRNP46939 3433 aa12.05□□□□□ -0.48
PTBP3-208ENST00000487997 H7C1W4 665 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 ALDH1L1O75891 902 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 LMNB1P20700 586 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
PTBP3-208ENST00000487997 RASSF7Q02833 373 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 GRAPQ13588 217 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 BEND3Q5T5X7 828 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
PTBP3-208ENST00000487997 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
PTBP3-208ENST00000487997 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
PTBP3-208ENST00000487997 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
PTBP3-208ENST00000487997 API5Q9BZZ5 524 aaKnown RBP12.03□□□□□ -0.48
PTBP3-208ENST00000487997 NOB1Q9ULX3 412 aaKnown RBP12.03□□□□□ -0.48
PTBP3-208ENST00000487997 NFKBIEO00221 500 aa12.02□□□□□ -0.49
PTBP3-208ENST00000487997 GRM8O00222 908 aa12.02□□□□□ -0.49
PTBP3-208ENST00000487997 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.49
PTBP3-208ENST00000487997 CTSWP56202 376 aa12.02□□□□□ -0.49
PTBP3-208ENST00000487997 FKBP4Q02790 459 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTBP3-208ENST00000487997 SP8Q8IXZ3 490 aa12.02□□□□□ -0.49
PTBP3-208ENST00000487997 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
PTBP3-208ENST00000487997 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
PTBP3-208ENST00000487997 LTBP3Q9NS15 1303 aa12.02□□□□□ -0.49
PTBP3-208ENST00000487997 LRRC37AA6NMS7 1700 aa12.01□□□□□ -0.49
PTBP3-208ENST00000487997 RPS8P62241 208 aaKnown RBP12.01□□□□□ -0.49
PTBP3-208ENST00000487997 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
PTBP3-208ENST00000487997 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
PTBP3-208ENST00000487997 CDC5LQ99459 802 aaKnown RBP12.01□□□□□ -0.49
PTBP3-208ENST00000487997 SLC34A2O95436 690 aa12□□□□□ -0.49
PTBP3-208ENST00000487997 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
PTBP3-208ENST00000487997 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
PTBP3-208ENST00000487997 MPNDQ8N594 471 aa12□□□□□ -0.49
PTBP3-208ENST00000487997 ZNF784Q8NCA9 323 aaPredicted RBP12□□□□□ -0.49
PTBP3-208ENST00000487997 SUPT20HQ8NEM7 779 aa12□□□□□ -0.49
PTBP3-208ENST00000487997 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
PTBP3-208ENST00000487997 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
PTBP3-208ENST00000487997 ARHGAP45Q92619 1136 aa12□□□□□ -0.49
PTBP3-208ENST00000487997 PLA2G12BQ9BX93 195 aa12□□□□□ -0.49
PTBP3-208ENST00000487997 CHMP3Q9Y3E7 222 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms