RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 GOLGA2Q08379 1002 aa6.93□□□□□ -1.3
SF1-217ENST00000486960 SAFB2Q14151 953 aaKnown RBP eCLIP6.93□□□□□ -1.3
SF1-217ENST00000486960 PHLDB3Q6NSJ2 640 aa6.93□□□□□ -1.3
SF1-217ENST00000486960 ZNF746Q6NUN9 644 aaPredicted RBP6.93□□□□□ -1.3
SF1-217ENST00000486960 AMIGO3Q86WK7 504 aa6.93□□□□□ -1.3
SF1-217ENST00000486960 NBPF15Q8N660 670 aa6.93□□□□□ -1.3
SF1-217ENST00000486960 TINF2Q9BSI4 451 aa6.93□□□□□ -1.3
SF1-217ENST00000486960 DDX56Q9NY93 547 aaKnown RBP6.93□□□□□ -1.3
SF1-217ENST00000486960 RASSF10A6NK89 507 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 PLA2G5P39877 138 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 GNL2Q13823 731 aaKnown RBP6.92□□□□□ -1.3
SF1-217ENST00000486960 BMS1Q14692 1282 aaKnown RBP6.92□□□□□ -1.3
SF1-217ENST00000486960 PDIA6Q15084 440 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 NBPF1Q3BBV0 1214 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 MYSM1Q5VVJ2 828 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 TMEM106CQ9BVX2 250 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 GPCPD1Q9NPB8 672 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 PKD1L2Q7Z442 2459 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 ADAMTSL1Q8N6G6 1762 aa6.92□□□□□ -1.3
SF1-217ENST00000486960 KDM6AO15550 1401 aaPredicted RBP6.92□□□□□ -1.3
SF1-217ENST00000486960 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
SF1-217ENST00000486960 SLIT3O75094 1523 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 PIEZO1Q92508 2521 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 SCN11AQ9UI33 1791 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 CFAP69A5D8W1 941 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 GOLIM4O00461 696 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 DNAJC6O75061 913 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 MAN1A1P33908 653 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 RBL2Q08999 1139 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 PPP2R2DQ66LE6 453 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 PDILTQ8N807 584 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 PAGR1Q9BTK6 254 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 TMUB1Q9BVT8 246 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 CAPN10Q9HC96 672 aa6.91□□□□□ -1.3
SF1-217ENST00000486960 TPX2Q9ULW0 747 aaKnown RBP6.91□□□□□ -1.3
SF1-217ENST00000486960 A0A0G2JLW4 131 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 DPYSL4O14531 572 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
SF1-217ENST00000486960 TIE1P35590 1138 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 PSEN1P49768 467 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 ELOAQ14241 798 aaKnown RBP6.9□□□□□ -1.3
SF1-217ENST00000486960 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 CCDC96Q2M329 555 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 AXDND1Q5T1B0 1012 aaPredicted RBP6.9□□□□□ -1.3
SF1-217ENST00000486960 ICE2Q659A1 982 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 JAZF1Q86VZ6 243 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 RPUSD2Q8IZ73 545 aaKnown RBP6.9□□□□□ -1.3
SF1-217ENST00000486960 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.3
SF1-217ENST00000486960 JDP2Q8WYK2 163 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 TSPAN18Q96SJ8 248 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 OSBPL2Q9H1P3 480 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 CCSER2Q9H7U1 834 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 NRBP1Q9UHY1 535 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 DMGDHQ9UI17 866 aaKnown RBP6.9□□□□□ -1.3
SF1-217ENST00000486960 SCINQ9Y6U3 715 aa6.9□□□□□ -1.3
SF1-217ENST00000486960 ABCC6O95255 1503 aa6.9□□□□□ -1.31
SF1-217ENST00000486960 DOT1LQ8TEK3 1739 aa6.9□□□□□ -1.31
SF1-217ENST00000486960 CACNA1GO43497 2377 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 GLTPD2A6NH11 291 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 PPP1R12AO14974 1030 aaPredicted RBP6.89□□□□□ -1.31
SF1-217ENST00000486960 CD53P19397 219 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 UBE4AQ14139 1066 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 ZRSR2Q15696 482 aaKnown RBP6.89□□□□□ -1.31
SF1-217ENST00000486960 TMEM164Q5U3C3 297 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 GET4Q7L5D6 327 aaPredicted RBP6.89□□□□□ -1.31
SF1-217ENST00000486960 NT5DC4Q86YG4 428 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
SF1-217ENST00000486960 FBXO22Q8NEZ5 403 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 EPAS1Q99814 870 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 CHMP4BQ9H444 224 aaKnown RBP6.89□□□□□ -1.31
SF1-217ENST00000486960 MAP3K20Q9NYL2 800 aaKnown RBP6.89□□□□□ -1.31
SF1-217ENST00000486960 SFMBT1Q9UHJ3 866 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 RPGRIP1LQ68CZ1 1315 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 PAPPA2Q9BXP8 1791 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 KIF1BO60333 1816 aa6.89□□□□□ -1.31
SF1-217ENST00000486960 TRPM7Q96QT4 1865 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 ITGBL1O95965 494 aaPredicted RBP6.88□□□□□ -1.31
SF1-217ENST00000486960 SERPINB4P48594 390 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 POU5F1BQ06416 359 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 SETDB1Q15047 1291 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 DEFB115Q30KQ5 88 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 NUTM2GQ5VZR2 741 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 CCSAPQ6IQ19 270 aaPredicted RBP6.88□□□□□ -1.31
SF1-217ENST00000486960 CREBRFQ8IUR6 639 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 IL17RAQ96F46 866 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 C8orf48Q96LL4 319 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 CEP63Q96MT8 703 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 INO80BQ9C086 356 aaPredicted RBP6.88□□□□□ -1.31
SF1-217ENST00000486960 TGIF2Q9GZN2 237 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 TRPC6Q9Y210 931 aa6.88□□□□□ -1.31
SF1-217ENST00000486960 KIAA0100Q14667 2235 aaKnown RBP6.88□□□□□ -1.31
SF1-217ENST00000486960 CPDO75976 1380 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 TTLL13PA6NNM8 815 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 DHX16O60231 1041 aaKnown RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 PLIN1O60240 522 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 KCNA3P22001 575 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 MDM2Q00987 491 aaPredicted RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 RASSF7Q02833 373 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms