RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
SF1-215ENST00000482693 LDHAL6AQ6ZMR3 332 aa20.94■□□□□ 0.94
SF1-215ENST00000482693 ZNF594Q96JF6 807 aaPredicted RBP20.94■□□□□ 0.94
SF1-215ENST00000482693 CHMP4BQ9H444 224 aaKnown RBP20.94■□□□□ 0.94
SF1-215ENST00000482693 XDHP47989 1333 aa20.94■□□□□ 0.94
SF1-215ENST00000482693 LRRC37AA6NMS7 1700 aa20.93■□□□□ 0.94
SF1-215ENST00000482693 TBC1D16Q8TBP0 767 aa20.93■□□□□ 0.94
SF1-215ENST00000482693 GGA1Q9UJY5 639 aa20.93■□□□□ 0.94
SF1-215ENST00000482693 DDX19BQ9UMR2 479 aa20.93■□□□□ 0.94
SF1-215ENST00000482693 C6orf229H3BNL8 230 aa20.92■□□□□ 0.94
SF1-215ENST00000482693 ATP2B4P23634 1241 aa20.92■□□□□ 0.94
SF1-215ENST00000482693 MTX1Q13505 466 aa20.92■□□□□ 0.94
SF1-215ENST00000482693 EYA3Q99504 573 aa20.92■□□□□ 0.94
SF1-215ENST00000482693 CNNM1Q9NRU3 951 aa20.92■□□□□ 0.94
SF1-215ENST00000482693 POLLQ9UGP5 575 aa20.92■□□□□ 0.94
SF1-215ENST00000482693 COG6Q9Y2V7 657 aa20.92■□□□□ 0.94
SF1-215ENST00000482693 RFX5P48382 616 aaPredicted RBP20.91■□□□□ 0.94
SF1-215ENST00000482693 RRP1P56182 461 aaKnown RBP20.91■□□□□ 0.94
SF1-215ENST00000482693 WASHC4Q2M389 1173 aa20.91■□□□□ 0.94
SF1-215ENST00000482693 C20orf194Q5TEA3 1177 aa20.91■□□□□ 0.94
SF1-215ENST00000482693 LARGE2Q8N3Y3 721 aa20.91■□□□□ 0.94
SF1-215ENST00000482693 JDP2Q8WYK2 163 aa20.91■□□□□ 0.94
SF1-215ENST00000482693 PPIP5K2O43314 1243 aa20.9■□□□□ 0.94
SF1-215ENST00000482693 UFL1O94874 794 aa20.9■□□□□ 0.94
SF1-215ENST00000482693 CHRNDQ07001 517 aa20.9■□□□□ 0.94
SF1-215ENST00000482693 KIAA2012Q0VF49 1180 aa20.9■□□□□ 0.94
SF1-215ENST00000482693 LEMD3Q9Y2U8 911 aa20.9■□□□□ 0.94
SF1-215ENST00000482693 SBF1O95248 1867 aa20.9■□□□□ 0.94
SF1-215ENST00000482693 SRGAP3O43295 1099 aa20.89■□□□□ 0.93
SF1-215ENST00000482693 AOC3Q16853 763 aa20.89■□□□□ 0.93
SF1-215ENST00000482693 FBXO3Q9UK99 471 aa20.89■□□□□ 0.93
SF1-215ENST00000482693 RIPOR2Q9Y4F9 1068 aa20.89■□□□□ 0.93
SF1-215ENST00000482693 MROH5Q6ZUA9 1318 aa20.88■□□□□ 0.93
SF1-215ENST00000482693 PTPN12Q05209 780 aaKnown RBP20.88■□□□□ 0.93
SF1-215ENST00000482693 NIM1KQ8IY84 436 aa20.88■□□□□ 0.93
SF1-215ENST00000482693 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
SF1-215ENST00000482693 ZC3H12CQ9C0D7 883 aaKnown RBP20.88■□□□□ 0.93
SF1-215ENST00000482693 KLHDC4Q8TBB5 520 aa20.87■□□□□ 0.93
SF1-215ENST00000482693 COPRSQ9NQ92 184 aa20.87■□□□□ 0.93
SF1-215ENST00000482693 ZBTB40Q9NUA8 1239 aa20.87■□□□□ 0.93
SF1-215ENST00000482693 DUOX1Q9NRD9 1551 aa20.87■□□□□ 0.93
SF1-215ENST00000482693 ZNF804BA4D1E1 1349 aa20.86■□□□□ 0.93
SF1-215ENST00000482693 FZD9O00144 591 aa20.86■□□□□ 0.93
SF1-215ENST00000482693 EYA2O00167 538 aa20.86■□□□□ 0.93
SF1-215ENST00000482693 KCNJ4P48050 445 aa20.86■□□□□ 0.93
SF1-215ENST00000482693 ATP8B2P98198 1209 aa20.86■□□□□ 0.93
SF1-215ENST00000482693 LRRC24Q50LG9 513 aa20.86■□□□□ 0.93
SF1-215ENST00000482693 DPY19L2Q6NUT2 758 aa20.86■□□□□ 0.93
SF1-215ENST00000482693 LTBP1Q14766 1721 aa20.85■□□□□ 0.93
SF1-215ENST00000482693 RIMBP2O15034 1052 aa20.85■□□□□ 0.93
SF1-215ENST00000482693 TAF5LO75529 589 aa20.85■□□□□ 0.93
SF1-215ENST00000482693 CIAO1O76071 339 aa20.85■□□□□ 0.93
SF1-215ENST00000482693 HELBQ8NG08 1087 aaPredicted RBP20.85■□□□□ 0.93
SF1-215ENST00000482693 C1orf115Q9H7X2 142 aa20.85■□□□□ 0.93
SF1-215ENST00000482693 ZNRF3Q9ULT6 936 aa20.85■□□□□ 0.93
SF1-215ENST00000482693 GLTPD2A6NH11 291 aa20.84■□□□□ 0.93
SF1-215ENST00000482693 METTL24Q5JXM2 366 aa20.84■□□□□ 0.93
SF1-215ENST00000482693 ZNF784Q8NCA9 323 aaPredicted RBP20.84■□□□□ 0.93
SF1-215ENST00000482693 GPR101Q96P66 508 aaPredicted RBP20.84■□□□□ 0.93
SF1-215ENST00000482693 KDM2BQ8NHM5 1336 aa20.83■□□□□ 0.93
SF1-215ENST00000482693 PNMA6EA0A0J9YXQ4 647 aa20.83■□□□□ 0.93
SF1-215ENST00000482693 WTIPA6NIX2 430 aaPredicted RBP20.83■□□□□ 0.93
SF1-215ENST00000482693 EIF6P56537 245 aaKnown RBP20.83■□□□□ 0.93
SF1-215ENST00000482693 POLA2Q14181 598 aa20.83■□□□□ 0.93
SF1-215ENST00000482693 ATG9AQ7Z3C6 839 aa20.83■□□□□ 0.93
SF1-215ENST00000482693 SSH3Q8TE77 659 aa20.83■□□□□ 0.93
SF1-215ENST00000482693 MED23Q9ULK4 1368 aa20.83■□□□□ 0.92
SF1-215ENST00000482693 CCDC88AQ3V6T2 1871 aa20.82■□□□□ 0.92
SF1-215ENST00000482693 G3V3G9 751 aa20.82■□□□□ 0.92
SF1-215ENST00000482693 IL15P40933 162 aaPredicted RBP20.82■□□□□ 0.92
SF1-215ENST00000482693 UBE4AQ14139 1066 aa20.82■□□□□ 0.92
SF1-215ENST00000482693 DCAF8Q5TAQ9 597 aa20.82■□□□□ 0.92
SF1-215ENST00000482693 CEP85Q6P2H3 762 aa20.82■□□□□ 0.92
SF1-215ENST00000482693 C15orf52Q6ZUT6 534 aaKnown RBP20.82■□□□□ 0.92
SF1-215ENST00000482693 SIL1Q9H173 461 aa20.82■□□□□ 0.92
SF1-215ENST00000482693 PA2G4Q9UQ80 394 aaKnown RBP20.82■□□□□ 0.92
SF1-215ENST00000482693 SPEF2Q9C093 1822 aa20.82■□□□□ 0.92
SF1-215ENST00000482693 DICER1Q9UPY3 1922 aaKnown RBP20.82■□□□□ 0.92
SF1-215ENST00000482693 COL4A5P29400 1685 aa20.81■□□□□ 0.92
SF1-215ENST00000482693 PDE8BO95263 885 aa20.81■□□□□ 0.92
SF1-215ENST00000482693 RPAP2Q8IXW5 612 aaPredicted RBP20.81■□□□□ 0.92
SF1-215ENST00000482693 ECE2O60344 883 aa20.8■□□□□ 0.92
SF1-215ENST00000482693 DOK7Q18PE1 504 aa20.8■□□□□ 0.92
SF1-215ENST00000482693 GPC2Q8N158 579 aa20.8■□□□□ 0.92
SF1-215ENST00000482693 VGLL2Q8N8G2 317 aa20.8■□□□□ 0.92
SF1-215ENST00000482693 GPBP1L1Q9HC44 474 aaPredicted RBP20.8■□□□□ 0.92
SF1-215ENST00000482693 ZNF541Q9H0D2 1346 aa20.79■□□□□ 0.92
SF1-215ENST00000482693 TNIP1Q15025 636 aa20.79■□□□□ 0.92
SF1-215ENST00000482693 PODNQ7Z5L7 613 aa20.79■□□□□ 0.92
SF1-215ENST00000482693 ZNF526Q8TF50 670 aaPredicted RBP20.79■□□□□ 0.92
SF1-215ENST00000482693 COA1Q9GZY4 146 aa20.79■□□□□ 0.92
SF1-215ENST00000482693 DBNDD1Q9H9R9 158 aa20.79■□□□□ 0.92
SF1-215ENST00000482693 CEP126Q9P2H0 1117 aa20.79■□□□□ 0.92
SF1-215ENST00000482693 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
SF1-215ENST00000482693 TIAM2Q8IVF5 1701 aa20.78■□□□□ 0.92
SF1-215ENST00000482693 SNAP23O00161 211 aa20.78■□□□□ 0.92
SF1-215ENST00000482693 CXCL9Q07325 125 aa20.78■□□□□ 0.92
SF1-215ENST00000482693 G3BP1Q13283 466 aaKnown RBP eCLIP20.78■□□□□ 0.92
SF1-215ENST00000482693 PUM3Q15397 648 aaKnown RBP20.78■□□□□ 0.92
SF1-215ENST00000482693 TXNRD3Q86VQ6 643 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms