RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 TMX4Q9H1E5 349 aaPredicted RBP15.42■□□□□ 0.06
PTPRF-213ENST00000481019 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
PTPRF-213ENST00000481019 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 YDJCA8MPS7 323 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 C6orf229H3BNL8 230 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 SNAP23O00161 211 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 RLBP1P12271 317 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 RABL6Q3YEC7 729 aaPredicted RBP15.41■□□□□ 0.06
PTPRF-213ENST00000481019 MEIS3Q99687 375 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 KCNQ5Q9NR82 932 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 ANKIB1Q9P2G1 1089 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
PTPRF-213ENST00000481019 UFL1O94874 794 aa15.4■□□□□ 0.06
PTPRF-213ENST00000481019 IFIT5Q13325 482 aaKnown RBP15.4■□□□□ 0.06
PTPRF-213ENST00000481019 DOK7Q18PE1 504 aa15.4■□□□□ 0.06
PTPRF-213ENST00000481019 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
PTPRF-213ENST00000481019 PUS3Q9BZE2 481 aaKnown RBP15.4■□□□□ 0.06
PTPRF-213ENST00000481019 KLRK1P26718 216 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 IGHMBP2P38935 993 aaKnown RBP15.39■□□□□ 0.05
PTPRF-213ENST00000481019 WASHC4Q2M389 1173 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 NIM1KQ8IY84 436 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 TMEM57Q8N5G2 664 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 HELBQ8NG08 1087 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-213ENST00000481019 KLHDC4Q8TBB5 520 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 GGA1Q9UJY5 639 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 XDHP47989 1333 aa15.39■□□□□ 0.05
PTPRF-213ENST00000481019 IPO8O15397 1037 aaKnown RBP15.38■□□□□ 0.05
PTPRF-213ENST00000481019 TAF5LO75529 589 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 RFX5P48382 616 aaPredicted RBP15.38■□□□□ 0.05
PTPRF-213ENST00000481019 CHRNDQ07001 517 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 CXCL9Q07325 125 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 DPY19L2Q6NUT2 758 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 TXNRD3Q86VQ6 643 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 VPS33BQ9H267 617 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 LRRFIP2Q9Y608 721 aaKnown RBP15.38■□□□□ 0.05
PTPRF-213ENST00000481019 GJA3Q9Y6H8 435 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 SCN9AQ15858 1988 aa15.38■□□□□ 0.05
PTPRF-213ENST00000481019 RAD17O75943 681 aa15.37■□□□□ 0.05
PTPRF-213ENST00000481019 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
PTPRF-213ENST00000481019 MPHOSPH8Q99549 860 aa15.37■□□□□ 0.05
PTPRF-213ENST00000481019 IRS2Q9Y4H2 1338 aa15.37■□□□□ 0.05
PTPRF-213ENST00000481019 PLIN1O60240 522 aa15.36■□□□□ 0.05
PTPRF-213ENST00000481019 UBTFL1P0CB47 393 aaPredicted RBP15.36■□□□□ 0.05
PTPRF-213ENST00000481019 POTEIP0CG38 1075 aa15.36■□□□□ 0.05
PTPRF-213ENST00000481019 POTEJP0CG39 1038 aa15.36■□□□□ 0.05
PTPRF-213ENST00000481019 ATP2B4P23634 1241 aa15.36■□□□□ 0.05
PTPRF-213ENST00000481019 EIF6P56537 245 aaKnown RBP15.36■□□□□ 0.05
PTPRF-213ENST00000481019 C1QTNF8P60827 252 aa15.36■□□□□ 0.05
PTPRF-213ENST00000481019 LRRC24Q50LG9 513 aa15.36■□□□□ 0.05
PTPRF-213ENST00000481019 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
PTPRF-213ENST00000481019 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
PTPRF-213ENST00000481019 ECE2O60344 883 aa15.35■□□□□ 0.05
PTPRF-213ENST00000481019 VEGFAP15692 232 aaPredicted RBP15.35■□□□□ 0.05
PTPRF-213ENST00000481019 LDHAL6AQ6ZMR3 332 aa15.35■□□□□ 0.05
PTPRF-213ENST00000481019 GPC2Q8N158 579 aa15.35■□□□□ 0.05
PTPRF-213ENST00000481019 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
PTPRF-213ENST00000481019 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
PTPRF-213ENST00000481019 ZNF646O15015 1829 aaPredicted RBP15.34■□□□□ 0.05
PTPRF-213ENST00000481019 SCNN1DP51172 638 aa15.34■□□□□ 0.05
PTPRF-213ENST00000481019 TAF7LQ5H9L4 462 aa15.34■□□□□ 0.05
PTPRF-213ENST00000481019 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
PTPRF-213ENST00000481019 EYA3Q99504 573 aa15.34■□□□□ 0.05
PTPRF-213ENST00000481019 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
PTPRF-213ENST00000481019 CNNM1Q9NRU3 951 aa15.34■□□□□ 0.05
PTPRF-213ENST00000481019 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
PTPRF-213ENST00000481019 ZNF804BA4D1E1 1349 aa15.34■□□□□ 0.05
PTPRF-213ENST00000481019 PSMD14O00487 310 aa15.33■□□□□ 0.04
PTPRF-213ENST00000481019 EPS15P42566 896 aa15.33■□□□□ 0.04
PTPRF-213ENST00000481019 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.04
PTPRF-213ENST00000481019 PTPN12Q05209 780 aaKnown RBP15.33■□□□□ 0.04
PTPRF-213ENST00000481019 ANKRD2Q9GZV1 360 aa15.33■□□□□ 0.04
PTPRF-213ENST00000481019 TAF1DQ9H5J8 278 aaPredicted RBP15.33■□□□□ 0.04
PTPRF-213ENST00000481019 LEMD3Q9Y2U8 911 aa15.33■□□□□ 0.04
PTPRF-213ENST00000481019 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
PTPRF-213ENST00000481019 SCN4AP35499 1836 aa15.33■□□□□ 0.04
PTPRF-213ENST00000481019 MED23Q9ULK4 1368 aa15.33■□□□□ 0.04
PTPRF-213ENST00000481019 TOMM70O94826 608 aa15.32■□□□□ 0.04
PTPRF-213ENST00000481019 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
PTPRF-213ENST00000481019 PA2G4Q9UQ80 394 aaKnown RBP15.32■□□□□ 0.04
PTPRF-213ENST00000481019 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
PTPRF-213ENST00000481019 MXD3Q9BW11 206 aa15.31■□□□□ 0.04
PTPRF-213ENST00000481019 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
PTPRF-213ENST00000481019 HACL1Q9UJ83 578 aa15.31■□□□□ 0.04
PTPRF-213ENST00000481019 CEP350Q5VT06 3117 aa15.31■□□□□ 0.04
PTPRF-213ENST00000481019 ADAMTSL1Q8N6G6 1762 aa15.31■□□□□ 0.04
PTPRF-213ENST00000481019 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
PTPRF-213ENST00000481019 GNAI3P08754 354 aa15.3■□□□□ 0.04
PTPRF-213ENST00000481019 EPHX2P34913 555 aa15.3■□□□□ 0.04
PTPRF-213ENST00000481019 PSME4Q14997 1843 aa15.3■□□□□ 0.04
PTPRF-213ENST00000481019 ATG9AQ7Z3C6 839 aa15.3■□□□□ 0.04
PTPRF-213ENST00000481019 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
PTPRF-213ENST00000481019 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
PTPRF-213ENST00000481019 VGLL2Q8N8G2 317 aa15.3■□□□□ 0.04
PTPRF-213ENST00000481019 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
PTPRF-213ENST00000481019 PNMA6EA0A0J9YXQ4 647 aa15.29■□□□□ 0.04
PTPRF-213ENST00000481019 KCNJ4P48050 445 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms