RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 PDE8AO60658 829 aa17.59■□□□□ 0.41
PKNOX1-206ENST00000480179 ITGA6P23229 1130 aa17.59■□□□□ 0.41
PKNOX1-206ENST00000480179 HSPA4P34932 840 aa17.59■□□□□ 0.41
PKNOX1-206ENST00000480179 A0A0D9SFI3 127 aa17.58■□□□□ 0.41
PKNOX1-206ENST00000480179 A0A1B0GUL7 405 aa17.58■□□□□ 0.41
PKNOX1-206ENST00000480179 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.41
PKNOX1-206ENST00000480179 NEK4P51957 841 aa17.58■□□□□ 0.41
PKNOX1-206ENST00000480179 HAUS7Q99871 368 aa17.58■□□□□ 0.41
PKNOX1-206ENST00000480179 FBXO3Q9UK99 471 aa17.58■□□□□ 0.41
PKNOX1-206ENST00000480179 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.4
PKNOX1-206ENST00000480179 LAMB2P55268 1798 aa17.58■□□□□ 0.4
PKNOX1-206ENST00000480179 PTH1RQ03431 593 aa17.58■□□□□ 0.4
PKNOX1-206ENST00000480179 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
PKNOX1-206ENST00000480179 NIP7Q9Y221 180 aaKnown RBP eCLIP17.58■□□□□ 0.4
PKNOX1-206ENST00000480179 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
PKNOX1-206ENST00000480179 SCN7AQ01118 1682 aa17.57■□□□□ 0.4
PKNOX1-206ENST00000480179 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
PKNOX1-206ENST00000480179 DDIT3P35638 169 aa17.57■□□□□ 0.4
PKNOX1-206ENST00000480179 CNTNAP4Q9C0A0 1308 aa17.57■□□□□ 0.4
PKNOX1-206ENST00000480179 HMGB2P26583 209 aaKnown RBP17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 ADORA1P30542 326 aa17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 METTL24Q5JXM2 366 aa17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 DDX46Q7L014 1031 aaKnown RBP17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 CNNM1Q9NRU3 951 aa17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 CCNL1Q9UK58 526 aaPredicted RBP17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 ZNF652Q9Y2D9 606 aa17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 CCDC171Q6TFL3 1326 aa17.56■□□□□ 0.4
PKNOX1-206ENST00000480179 LDHAL6AQ6ZMR3 332 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 IL17RAQ96F46 866 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 UPF3BQ9BZI7 483 aaKnown RBP17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 AKAP2Q9Y2D5 859 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 SNX14Q9Y5W7 946 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 RFX7Q2KHR2 1363 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 SPEF2Q9C093 1822 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 GOLIM4O00461 696 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 GPR162Q16538 588 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 GORABQ5T7V8 394 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 SMIM5Q71RC9 77 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 PNPLA7Q6ZV29 1317 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 MED23Q9ULK4 1368 aa17.55■□□□□ 0.4
PKNOX1-206ENST00000480179 LY75O60449 1722 aa17.54■□□□□ 0.4
PKNOX1-206ENST00000480179 NTSR2O95665 410 aa17.54■□□□□ 0.4
PKNOX1-206ENST00000480179 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
PKNOX1-206ENST00000480179 RASEFQ8IZ41 740 aa17.54■□□□□ 0.4
PKNOX1-206ENST00000480179 AK7Q96M32 723 aa17.54■□□□□ 0.4
PKNOX1-206ENST00000480179 PAG1Q9NWQ8 432 aa17.54■□□□□ 0.4
PKNOX1-206ENST00000480179 RIPOR2Q9Y4F9 1068 aa17.54■□□□□ 0.4
PKNOX1-206ENST00000480179 IFIT1P09914 478 aaKnown RBP17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 KCNJ4P48050 445 aa17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 TTC39AQ5SRH9 613 aa17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 ZNF784Q8NCA9 323 aaPredicted RBP17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 CIZ1Q9ULV3 898 aaPredicted RBP17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
PKNOX1-206ENST00000480179 ATP2B3Q16720 1220 aa17.52■□□□□ 0.4
PKNOX1-206ENST00000480179 ZNF589Q86UQ0 364 aaPredicted RBP17.52■□□□□ 0.4
PKNOX1-206ENST00000480179 SNRKQ9NRH2 765 aa17.52■□□□□ 0.4
PKNOX1-206ENST00000480179 RBM8AQ9Y5S9 174 aaKnown RBP17.52■□□□□ 0.4
PKNOX1-206ENST00000480179 GNPATO15228 680 aa17.52■□□□□ 0.39
PKNOX1-206ENST00000480179 CHGBP05060 677 aa17.52■□□□□ 0.39
PKNOX1-206ENST00000480179 KBTBD3Q8NAB2 608 aa17.52■□□□□ 0.39
PKNOX1-206ENST00000480179 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
PKNOX1-206ENST00000480179 UTRNP46939 3433 aa17.51■□□□□ 0.39
PKNOX1-206ENST00000480179 MCM2P49736 904 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 RC3H1Q5TC82 1133 aaKnown RBP17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 BICDL1Q6ZP65 573 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 CCDC129Q6ZRS4 1044 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 RPS6KA4O75676 772 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 CLEC4GQ6UXB4 293 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 TMX3Q96JJ7 454 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 SEC31BQ9NQW1 1179 aa17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
PKNOX1-206ENST00000480179 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
PKNOX1-206ENST00000480179 VGLL2Q8N8G2 317 aa17.49■□□□□ 0.39
PKNOX1-206ENST00000480179 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
PKNOX1-206ENST00000480179 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
PKNOX1-206ENST00000480179 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
PKNOX1-206ENST00000480179 C4BP0C0L5 1744 aa17.49■□□□□ 0.39
PKNOX1-206ENST00000480179 ARAP2Q8WZ64 1704 aa17.49■□□□□ 0.39
PKNOX1-206ENST00000480179 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.396e-7■■□□□ 14.1
PKNOX1-206ENST00000480179 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 SLFNL1Q499Z3 407 aa17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 ERFEQ4G0M1 354 aa17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 ZGPATQ8N5A5 531 aaKnown RBP17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 C4AP0C0L4 1744 aa17.48■□□□□ 0.39
PKNOX1-206ENST00000480179 SLC27A2O14975 620 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 TAF5LO75529 589 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 CPA1P15085 419 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 SCARF1Q14162 830 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 RAB3GAP1Q15042 981 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 TBC1D9BQ66K14 1250 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms