RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-219ENST00000479941 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
ATG4B-219ENST00000479941 LDHAL6AQ6ZMR3 332 aa13.54□□□□□ -0.24
ATG4B-219ENST00000479941 ANKRD2Q9GZV1 360 aa13.54□□□□□ -0.24
ATG4B-219ENST00000479941 DDX19BQ9UMR2 479 aa13.54□□□□□ -0.24
ATG4B-219ENST00000479941 XDHP47989 1333 aa13.54□□□□□ -0.24
ATG4B-219ENST00000479941 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 PPIP5K2O43314 1243 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 ATP2B4P23634 1241 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 MTX1Q13505 466 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 JDP2Q8WYK2 163 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-219ENST00000479941 EYA3Q99504 573 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
ATG4B-219ENST00000479941 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
ATG4B-219ENST00000479941 KIAA2012Q0VF49 1180 aa13.52□□□□□ -0.25
ATG4B-219ENST00000479941 WASHC4Q2M389 1173 aa13.52□□□□□ -0.25
ATG4B-219ENST00000479941 CNNM1Q9NRU3 951 aa13.52□□□□□ -0.25
ATG4B-219ENST00000479941 LEMD3Q9Y2U8 911 aa13.52□□□□□ -0.25
ATG4B-219ENST00000479941 COG6Q9Y2V7 657 aa13.52□□□□□ -0.25
ATG4B-219ENST00000479941 CCDC88AQ3V6T2 1871 aa13.51□□□□□ -0.25
ATG4B-219ENST00000479941 UFL1O94874 794 aa13.51□□□□□ -0.25
ATG4B-219ENST00000479941 RFX5P48382 616 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-219ENST00000479941 RRP1P56182 461 aaKnown RBP13.51□□□□□ -0.25
ATG4B-219ENST00000479941 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
ATG4B-219ENST00000479941 CHRNDQ07001 517 aa13.51□□□□□ -0.25
ATG4B-219ENST00000479941 AOC3Q16853 763 aa13.51□□□□□ -0.25
ATG4B-219ENST00000479941 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
ATG4B-219ENST00000479941 FBXO3Q9UK99 471 aa13.51□□□□□ -0.25
ATG4B-219ENST00000479941 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
ATG4B-219ENST00000479941 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 DUOX1Q9NRD9 1551 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 MROH5Q6ZUA9 1318 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 FZD9O00144 591 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 NIM1KQ8IY84 436 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 PUS3Q9BZE2 481 aaKnown RBP13.5□□□□□ -0.25
ATG4B-219ENST00000479941 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
ATG4B-219ENST00000479941 ZNF804BA4D1E1 1349 aa13.49□□□□□ -0.25
ATG4B-219ENST00000479941 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
ATG4B-219ENST00000479941 KCNJ4P48050 445 aa13.49□□□□□ -0.25
ATG4B-219ENST00000479941 KLHDC4Q8TBB5 520 aa13.49□□□□□ -0.25
ATG4B-219ENST00000479941 COPRSQ9NQ92 184 aa13.49□□□□□ -0.25
ATG4B-219ENST00000479941 MED23Q9ULK4 1368 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 GLTPD2A6NH11 291 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 EYA2O00167 538 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 TAF5LO75529 589 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 EIF6P56537 245 aaKnown RBP13.48□□□□□ -0.25
ATG4B-219ENST00000479941 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
ATG4B-219ENST00000479941 C1orf115Q9H7X2 142 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 ZNRF3Q9ULT6 936 aa13.48□□□□□ -0.25
ATG4B-219ENST00000479941 TIAM2Q8IVF5 1701 aa13.47□□□□□ -0.25
ATG4B-219ENST00000479941 CIAO1O76071 339 aa13.47□□□□□ -0.25
ATG4B-219ENST00000479941 IL15P40933 162 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-219ENST00000479941 UBE4AQ14139 1066 aa13.47□□□□□ -0.25
ATG4B-219ENST00000479941 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
ATG4B-219ENST00000479941 HELBQ8NG08 1087 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-219ENST00000479941 GPR101Q96P66 508 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-219ENST00000479941 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-219ENST00000479941 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 G3V3G9 751 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 PDE8BO95263 885 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 POLA2Q14181 598 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 CEP85Q6P2H3 762 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 C15orf52Q6ZUT6 534 aaKnown RBP13.46□□□□□ -0.25
ATG4B-219ENST00000479941 ATG9AQ7Z3C6 839 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 SSH3Q8TE77 659 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 SIL1Q9H173 461 aa13.46□□□□□ -0.25
ATG4B-219ENST00000479941 PA2G4Q9UQ80 394 aaKnown RBP13.46□□□□□ -0.25
ATG4B-219ENST00000479941 COL4A5P29400 1685 aa13.46□□□□□ -0.26
ATG4B-219ENST00000479941 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-219ENST00000479941 ECE2O60344 883 aa13.45□□□□□ -0.26
ATG4B-219ENST00000479941 PODNQ7Z5L7 613 aa13.45□□□□□ -0.26
ATG4B-219ENST00000479941 RPAP2Q8IXW5 612 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-219ENST00000479941 GPC2Q8N158 579 aa13.45□□□□□ -0.26
ATG4B-219ENST00000479941 ZNF526Q8TF50 670 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-219ENST00000479941 DBNDD1Q9H9R9 158 aa13.45□□□□□ -0.26
ATG4B-219ENST00000479941 ZNF541Q9H0D2 1346 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 SNAP23O00161 211 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 DDNO94850 711 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-219ENST00000479941 CXCL9Q07325 125 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 TNIP1Q15025 636 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 DOK7Q18PE1 504 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 VGLL2Q8N8G2 317 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 CEP126Q9P2H0 1117 aa13.44□□□□□ -0.26
ATG4B-219ENST00000479941 YDJCA8MPS7 323 aa13.43□□□□□ -0.26
ATG4B-219ENST00000479941 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms