RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 BCL11BQ9C0K0 894 aaPredicted RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 ZNF365Q70YC5 407 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 BAG1Q99933 345 aaPredicted RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 NEUROG2Q9H2A3 272 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 IARS2Q9NSE4 1012 aaKnown RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 CEP164Q9UPV0 1460 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 GOLGA8JA6NMD2 632 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 MEIS1O00470 390 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 NR1I2O75469 434 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 SAMD1Q6SPF0 538 aaPredicted RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 STX19Q8N4C7 294 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 HCLS1P14317 486 aaPredicted RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 LAMC2Q13753 1193 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 CCDC102BQ68D86 513 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 RNF41Q9H4P4 317 aaPredicted RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 KRT87PA6NCN2 255 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 KIF23Q02241 960 aaPredicted RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 CTAGE3PQ8IX95 158 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 GOLGA8TH3BQL2 631 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 H7C0S8 307 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 GOLGA8HP0CJ92 632 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 KRT85P78386 507 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 CDC37L1Q7L3B6 337 aa6.12□□□□□ -1.43
USF3-202ENST00000478658 DACT3Q96B18 629 aaPredicted RBP6.12□□□□□ -1.43
USF3-202ENST00000478658 GIGYF1O75420 1035 aaPredicted RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 CCDC30Q5VVM6 783 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 SRRM1Q8IYB3 904 aaKnown RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 PSMD1Q99460 953 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 TYW5A2RUC4 315 aaKnown RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 TMEM247A6NEH6 219 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 TTLL12Q14166 644 aaPredicted RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 GEN1Q17RS7 908 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 CCDC152Q4G0S7 254 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 SIX6OS1Q8N1H7 587 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 FOXP3Q9BZS1 431 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 LARSQ9P2J5 1176 aaKnown RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 WDR33Q9C0J8 1336 aaKnown RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 TSPY2A6NKD2 308 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 PRDM1O75626 825 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 TSPY3P0CV98 308 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 TSPY8P0CW00 308 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 RASSF7Q02833 373 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 CCDC62Q6P9F0 684 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 KIF18AQ8NI77 898 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 DKC1O60832 514 aaKnown RBP eCLIP6.11□□□□□ -1.43
USF3-202ENST00000478658 STX1AQ16623 288 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 TRIM8Q9BZR9 551 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 MIS12Q9H081 205 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 ARHGEF9O43307 516 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 NAP1L4Q99733 375 aaKnown RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 CCDC88BA6NC98 1476 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 FAM95CA0A1B0GW59 222 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 NLRP5P59047 1200 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 NOP14P78316 857 aaKnown RBP6.11□□□□□ -1.43
USF3-202ENST00000478658 MAP3K10Q02779 954 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 KIFAP3Q92845 792 aa6.11□□□□□ -1.43
USF3-202ENST00000478658 A0A0B4J269 797 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 PPP1R2P41236 205 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 BRPF1P55201 1214 aaPredicted RBP6.1□□□□□ -1.43
USF3-202ENST00000478658 WASHC5Q12768 1159 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 TUBB3Q13509 450 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 RIC3Q7Z5B4 369 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 CCDC63Q8NA47 563 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 KIF1BPQ96EK5 621 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 CUEDC2Q9H467 287 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 SCOCQ9UIL1 159 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 ATP2B2Q01814 1243 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 MED21Q13503 144 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 RBBP5Q15291 538 aaKnown RBP6.1□□□□□ -1.43
USF3-202ENST00000478658 GPATCH11Q8N954 259 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 RPS6KC1Q96S38 1066 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 ARHGEF37A1IGU5 675 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 PPFIA4O75335 1185 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 TTLL7Q6ZT98 887 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 RAB11FIP4Q86YS3 637 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 TTC25Q96NG3 672 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 UBXN8O00124 270 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 BIRC5O15392 142 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 ZNF189O75820 626 aaPredicted RBP6.1□□□□□ -1.43
USF3-202ENST00000478658 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.1□□□□□ -1.43
USF3-202ENST00000478658 CNTLNQ9NXG0 1405 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 SMCO2A6NFE2 343 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 KRT13P13646 458 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 HDAC4P56524 1084 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 GSTO1P78417 241 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 B4GALNT4Q76KP1 1039 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 CARD9Q9H257 536 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 PYGMP11217 842 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 FAM160A1Q05DH4 1040 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 INF2Q27J81 1249 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 IFT20Q8IY31 132 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 SYCP3Q8IZU3 236 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 MPHOSPH8Q99549 860 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 TNMDQ9H2S6 317 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 SLC5A4Q9NY91 659 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 GOLGA8IPA6NC78 632 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 SLC38A10Q9HBR0 1119 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 ITM2BQ9Y287 266 aa6.1□□□□□ -1.43
USF3-202ENST00000478658 HLA-DOAP06340 250 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 POLR2BP30876 1174 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms