RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 ERCC6LQ2NKX8 1250 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 FAM173BQ6P4H8 233 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 TXLNBQ8N3L3 684 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 GTF3C6Q969F1 213 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
SAMM50-203ENST00000474323 PLA2G4AP47712 749 aa17.02■□□□□ 0.32
SAMM50-203ENST00000474323 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.32
SAMM50-203ENST00000474323 CCDC93Q567U6 631 aa17.02■□□□□ 0.32
SAMM50-203ENST00000474323 STK31Q9BXU1 1019 aa17.02■□□□□ 0.32
SAMM50-203ENST00000474323 NECAB1Q8N987 351 aa17.02■□□□□ 0.31
SAMM50-203ENST00000474323 BICD2Q8TD16 824 aa17.02■□□□□ 0.31
SAMM50-203ENST00000474323 GIGYF1O75420 1035 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-203ENST00000474323 TEFQ10587 303 aa17.01■□□□□ 0.31
SAMM50-203ENST00000474323 SNW1Q13573 536 aaKnown RBP17.01■□□□□ 0.31
SAMM50-203ENST00000474323 FILIP1Q7Z7B0 1213 aa17.01■□□□□ 0.31
SAMM50-203ENST00000474323 ARGLU1Q9NWB6 273 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-203ENST00000474323 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
SAMM50-203ENST00000474323 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
SAMM50-203ENST00000474323 NPHP1O15259 732 aa17.01■□□□□ 0.31
SAMM50-203ENST00000474323 ZRANB2O95218 330 aaKnown RBP eCLIP17.01■□□□□ 0.31
SAMM50-203ENST00000474323 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
SAMM50-203ENST00000474323 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
SAMM50-203ENST00000474323 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
SAMM50-203ENST00000474323 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
SAMM50-203ENST00000474323 CTAGE5O15320 804 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 ATP8B1O43520 1251 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
SAMM50-203ENST00000474323 RHPN1Q8TCX5 695 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 PGBD1Q96JS3 809 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 MEGF6O75095 1541 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 DTNBO60941 627 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
SAMM50-203ENST00000474323 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
SAMM50-203ENST00000474323 FLIIQ13045 1269 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 STX1AQ16623 288 aa17■□□□□ 0.31
SAMM50-203ENST00000474323 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 ABCC6O95255 1503 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 BECN2A8MW95 431 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
SAMM50-203ENST00000474323 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
SAMM50-203ENST00000474323 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
SAMM50-203ENST00000474323 IMPACTQ9P2X3 320 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
SAMM50-203ENST00000474323 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
SAMM50-203ENST00000474323 PTH1RQ03431 593 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 NECTIN1Q15223 517 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 TMCO3Q6UWJ1 677 aa16.99■□□□□ 0.31
SAMM50-203ENST00000474323 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
SAMM50-203ENST00000474323 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
SAMM50-203ENST00000474323 KCNJ6P48051 423 aa16.98■□□□□ 0.31
SAMM50-203ENST00000474323 ANKRD1Q15327 319 aa16.98■□□□□ 0.31
SAMM50-203ENST00000474323 BABAM1Q9NWV8 329 aa16.98■□□□□ 0.31
SAMM50-203ENST00000474323 ROBO1Q9Y6N7 1651 aa16.98■□□□□ 0.31
SAMM50-203ENST00000474323 PSMA5P28066 241 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 GPS2Q13227 327 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 POLA2Q14181 598 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-203ENST00000474323 USP44Q9H0E7 712 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
SAMM50-203ENST00000474323 LTBP4Q8N2S1 1624 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 KCNQ3O43525 872 aa16.97■□□□□ 0.31
SAMM50-203ENST00000474323 GLRX3O76003 335 aaKnown RBP16.97■□□□□ 0.31
SAMM50-203ENST00000474323 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-203ENST00000474323 DHX8Q14562 1220 aaKnown RBP16.97■□□□□ 0.31
SAMM50-203ENST00000474323 CCDC30Q5VVM6 783 aa16.96■□□□□ 0.31
SAMM50-203ENST00000474323 E4F1Q66K89 784 aaPredicted RBP16.96■□□□□ 0.31
SAMM50-203ENST00000474323 TOM1L2Q6ZVM7 507 aa16.96■□□□□ 0.31
SAMM50-203ENST00000474323 UBXN6Q9BZV1 441 aa16.96■□□□□ 0.31
SAMM50-203ENST00000474323 RASSF4Q9H2L5 321 aa16.96■□□□□ 0.31
SAMM50-203ENST00000474323 TNNT3P45378 269 aaPredicted RBP16.96■□□□□ 0.31
SAMM50-203ENST00000474323 LARP1Q6PKG0 1096 aaKnown RBP16.96■□□□□ 0.31
SAMM50-203ENST00000474323 UBXN4Q92575 508 aa16.96■□□□□ 0.31
SAMM50-203ENST00000474323 PPP1R13BQ96KQ4 1090 aa16.96■□□□□ 0.31
SAMM50-203ENST00000474323 ALDH8A1Q9H2A2 487 aaPredicted RBP16.96■□□□□ 0.31
SAMM50-203ENST00000474323 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 TPM1P09493 284 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 SYT10Q6XYQ8 523 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 DHX40Q8IX18 779 aaKnown RBP16.95■□□□□ 0.3
SAMM50-203ENST00000474323 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 ANO10Q9NW15 660 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 PPP1R42Q7Z4L9 355 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 NEK11Q8NG66 645 aa16.95■□□□□ 0.3
SAMM50-203ENST00000474323 SRRTQ9BXP5 876 aaKnown RBP16.95■□□□□ 0.3
SAMM50-203ENST00000474323 ORC3Q9UBD5 711 aaPredicted RBP16.95■□□□□ 0.3
SAMM50-203ENST00000474323 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
SAMM50-203ENST00000474323 KRBA2Q6ZNG9 492 aa16.94■□□□□ 0.3
SAMM50-203ENST00000474323 CCDC150Q8NCX0 1101 aa16.94■□□□□ 0.3
SAMM50-203ENST00000474323 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
SAMM50-203ENST00000474323 COL5A2P05997 1499 aaPredicted RBP16.94■□□□□ 0.3
SAMM50-203ENST00000474323 HSP90AB4PQ58FF6 505 aa16.94■□□□□ 0.3
SAMM50-203ENST00000474323 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
SAMM50-203ENST00000474323 LRRN4CLQ8ND94 238 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms