RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
SNX13-205ENST00000471744 LTBP1Q14766 1721 aa18.91■□□□□ 0.62
SNX13-205ENST00000471744 TIAM2Q8IVF5 1701 aa18.91■□□□□ 0.62
SNX13-205ENST00000471744 GNAI2P04899 355 aa18.91■□□□□ 0.62
SNX13-205ENST00000471744 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
SNX13-205ENST00000471744 NSFL1CQ9UNZ2 370 aaKnown RBP18.91■□□□□ 0.62
SNX13-205ENST00000471744 LRRFIP2Q9Y608 721 aaKnown RBP18.91■□□□□ 0.62
SNX13-205ENST00000471744 XDHP47989 1333 aa18.91■□□□□ 0.62
SNX13-205ENST00000471744 PANK1Q8TE04 598 aa18.9■□□□□ 0.62
SNX13-205ENST00000471744 ANKRD2Q9GZV1 360 aa18.9■□□□□ 0.62
SNX13-205ENST00000471744 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
SNX13-205ENST00000471744 ANKIB1Q9P2G1 1089 aa18.9■□□□□ 0.62
SNX13-205ENST00000471744 PLIN1O60240 522 aa18.89■□□□□ 0.61
SNX13-205ENST00000471744 GPSM2P81274 684 aa18.89■□□□□ 0.61
SNX13-205ENST00000471744 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
SNX13-205ENST00000471744 EYA3Q99504 573 aa18.89■□□□□ 0.61
SNX13-205ENST00000471744 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.61
SNX13-205ENST00000471744 MINPP1Q9UNW1 487 aa18.89■□□□□ 0.61
SNX13-205ENST00000471744 PRELPP51888 382 aa18.88■□□□□ 0.61
SNX13-205ENST00000471744 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
SNX13-205ENST00000471744 JDP2Q8WYK2 163 aa18.88■□□□□ 0.61
SNX13-205ENST00000471744 GGA1Q9UJY5 639 aa18.88■□□□□ 0.61
SNX13-205ENST00000471744 DUOX1Q9NRD9 1551 aa18.88■□□□□ 0.61
SNX13-205ENST00000471744 A0A1B0GUL6 1792 aa18.87■□□□□ 0.61
SNX13-205ENST00000471744 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
SNX13-205ENST00000471744 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
SNX13-205ENST00000471744 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
SNX13-205ENST00000471744 MTX1Q13505 466 aa18.87■□□□□ 0.61
SNX13-205ENST00000471744 SLC51AQ86UW1 340 aa18.87■□□□□ 0.61
SNX13-205ENST00000471744 LARGE2Q8N3Y3 721 aa18.87■□□□□ 0.61
SNX13-205ENST00000471744 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
SNX13-205ENST00000471744 C6orf229H3BNL8 230 aa18.86■□□□□ 0.61
SNX13-205ENST00000471744 UFL1O94874 794 aa18.86■□□□□ 0.61
SNX13-205ENST00000471744 KIAA2012Q0VF49 1180 aa18.86■□□□□ 0.61
SNX13-205ENST00000471744 TBC1D16Q8TBP0 767 aa18.86■□□□□ 0.61
SNX13-205ENST00000471744 FBXO3Q9UK99 471 aa18.86■□□□□ 0.61
SNX13-205ENST00000471744 LEMD3Q9Y2U8 911 aa18.86■□□□□ 0.61
SNX13-205ENST00000471744 RRP1P56182 461 aaKnown RBP18.85■□□□□ 0.61
SNX13-205ENST00000471744 CHRNDQ07001 517 aa18.85■□□□□ 0.61
SNX13-205ENST00000471744 WASHC4Q2M389 1173 aa18.85■□□□□ 0.61
SNX13-205ENST00000471744 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
SNX13-205ENST00000471744 ZNF594Q96JF6 807 aaPredicted RBP18.85■□□□□ 0.61
SNX13-205ENST00000471744 POLLQ9UGP5 575 aa18.85■□□□□ 0.61
SNX13-205ENST00000471744 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
SNX13-205ENST00000471744 MROH5Q6ZUA9 1318 aa18.84■□□□□ 0.61
SNX13-205ENST00000471744 AOC3Q16853 763 aa18.84■□□□□ 0.61
SNX13-205ENST00000471744 DPY19L2Q6NUT2 758 aa18.84■□□□□ 0.61
SNX13-205ENST00000471744 RFX5P48382 616 aaPredicted RBP18.83■□□□□ 0.6
SNX13-205ENST00000471744 ZC3H12CQ9C0D7 883 aaKnown RBP18.83■□□□□ 0.6
SNX13-205ENST00000471744 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
SNX13-205ENST00000471744 FZD9O00144 591 aa18.82■□□□□ 0.6
SNX13-205ENST00000471744 SRGAP3O43295 1099 aa18.82■□□□□ 0.6
SNX13-205ENST00000471744 KCNJ4P48050 445 aa18.82■□□□□ 0.6
SNX13-205ENST00000471744 PTPN12Q05209 780 aaKnown RBP18.82■□□□□ 0.6
SNX13-205ENST00000471744 RIPOR2Q9Y4F9 1068 aa18.82■□□□□ 0.6
SNX13-205ENST00000471744 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
SNX13-205ENST00000471744 ZNF804BA4D1E1 1349 aa18.81■□□□□ 0.6
SNX13-205ENST00000471744 GLTPD2A6NH11 291 aa18.81■□□□□ 0.6
SNX13-205ENST00000471744 EYA2O00167 538 aa18.81■□□□□ 0.6
SNX13-205ENST00000471744 CIAO1O76071 339 aa18.81■□□□□ 0.6
SNX13-205ENST00000471744 EIF6P56537 245 aaKnown RBP18.81■□□□□ 0.6
SNX13-205ENST00000471744 COPRSQ9NQ92 184 aa18.81■□□□□ 0.6
SNX13-205ENST00000471744 G3V3G9 751 aa18.8■□□□□ 0.6
SNX13-205ENST00000471744 ATP8B2P98198 1209 aa18.8■□□□□ 0.6
SNX13-205ENST00000471744 DCAF8Q5TAQ9 597 aa18.8■□□□□ 0.6
SNX13-205ENST00000471744 C20orf194Q5TEA3 1177 aa18.8■□□□□ 0.6
SNX13-205ENST00000471744 ZNF784Q8NCA9 323 aaPredicted RBP18.8■□□□□ 0.6
SNX13-205ENST00000471744 PUS3Q9BZE2 481 aaKnown RBP18.8■□□□□ 0.6
SNX13-205ENST00000471744 ZNRF3Q9ULT6 936 aa18.8■□□□□ 0.6
SNX13-205ENST00000471744 COL4A5P29400 1685 aa18.79■□□□□ 0.6
SNX13-205ENST00000471744 UBE4AQ14139 1066 aa18.79■□□□□ 0.6
SNX13-205ENST00000471744 LRRC24Q50LG9 513 aa18.79■□□□□ 0.6
SNX13-205ENST00000471744 METTL24Q5JXM2 366 aa18.79■□□□□ 0.6
SNX13-205ENST00000471744 KLHDC4Q8TBB5 520 aa18.79■□□□□ 0.6
SNX13-205ENST00000471744 ZBTB40Q9NUA8 1239 aa18.79■□□□□ 0.6
SNX13-205ENST00000471744 RIMBP2O15034 1052 aa18.78■□□□□ 0.6
SNX13-205ENST00000471744 TAF5LO75529 589 aa18.78■□□□□ 0.6
SNX13-205ENST00000471744 IL15P40933 162 aaPredicted RBP18.78■□□□□ 0.6
SNX13-205ENST00000471744 C15orf52Q6ZUT6 534 aaKnown RBP18.78■□□□□ 0.6
SNX13-205ENST00000471744 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
SNX13-205ENST00000471744 C1orf115Q9H7X2 142 aa18.78■□□□□ 0.6
SNX13-205ENST00000471744 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
SNX13-205ENST00000471744 PNMA6EA0A0J9YXQ4 647 aa18.77■□□□□ 0.6
SNX13-205ENST00000471744 POLA2Q14181 598 aa18.77■□□□□ 0.6
SNX13-205ENST00000471744 SSH3Q8TE77 659 aa18.77■□□□□ 0.6
SNX13-205ENST00000471744 WDR90Q96KV7 1748 aa18.77■□□□□ 0.59
SNX13-205ENST00000471744 PSME4Q14997 1843 aa18.77■□□□□ 0.59
SNX13-205ENST00000471744 ECE2O60344 883 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 PDE8BO95263 885 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 TNIP1Q15025 636 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 CEP85Q6P2H3 762 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 PODNQ7Z5L7 613 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 RPAP2Q8IXW5 612 aaPredicted RBP18.76■□□□□ 0.59
SNX13-205ENST00000471744 GPC2Q8N158 579 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 GPR101Q96P66 508 aaPredicted RBP18.76■□□□□ 0.59
SNX13-205ENST00000471744 COA1Q9GZY4 146 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 SIL1Q9H173 461 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 DBNDD1Q9H9R9 158 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
SNX13-205ENST00000471744 SCN4AP35499 1836 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms