RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 COPRSQ9NQ92 184 aa12.19□□□□□ -0.46
CLK2-204ENST00000471047 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
CLK2-204ENST00000471047 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
CLK2-204ENST00000471047 NRXN2Q9P2S2 1712 aa12.18□□□□□ -0.46
CLK2-204ENST00000471047 TMEM88BA6NKF7 163 aa12.18□□□□□ -0.46
CLK2-204ENST00000471047 IRS4O14654 1257 aaPredicted RBP12.18□□□□□ -0.46
CLK2-204ENST00000471047 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
CLK2-204ENST00000471047 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
CLK2-204ENST00000471047 RGS3P49796 1198 aa12.18□□□□□ -0.46
CLK2-204ENST00000471047 MLLT1Q03111 559 aaPredicted RBP12.18□□□□□ -0.46
CLK2-204ENST00000471047 PTPN12Q05209 780 aaKnown RBP12.18□□□□□ -0.46
CLK2-204ENST00000471047 LDHDQ86WU2 507 aa12.18□□□□□ -0.46
CLK2-204ENST00000471047 LRRCC1Q9C099 1032 aa12.18□□□□□ -0.46
CLK2-204ENST00000471047 TNRC18O15417 2968 aaPredicted RBP12.17□□□□□ -0.46
CLK2-204ENST00000471047 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
CLK2-204ENST00000471047 PDE8AO60658 829 aa12.17□□□□□ -0.46
CLK2-204ENST00000471047 TTLL11Q8NHH1 800 aa12.17□□□□□ -0.46
CLK2-204ENST00000471047 RHPN1Q8TCX5 695 aa12.17□□□□□ -0.46
CLK2-204ENST00000471047 TAOK3Q9H2K8 898 aa12.17□□□□□ -0.46
CLK2-204ENST00000471047 TAF1DQ9H5J8 278 aaPredicted RBP12.17□□□□□ -0.46
CLK2-204ENST00000471047 PA2G4Q9UQ80 394 aaKnown RBP12.17□□□□□ -0.46
CLK2-204ENST00000471047 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
CLK2-204ENST00000471047 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
CLK2-204ENST00000471047 SALL3Q9BXA9 1300 aa12.16□□□□□ -0.46
CLK2-204ENST00000471047 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
CLK2-204ENST00000471047 CTSWP56202 376 aa12.16□□□□□ -0.46
CLK2-204ENST00000471047 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
CLK2-204ENST00000471047 SLC10A5Q5PT55 438 aa12.16□□□□□ -0.46
CLK2-204ENST00000471047 KIF1BPQ96EK5 621 aa12.16□□□□□ -0.46
CLK2-204ENST00000471047 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
CLK2-204ENST00000471047 LTBP3Q9NS15 1303 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 APBB1O00213 710 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
CLK2-204ENST00000471047 ERC1Q8IUD2 1116 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 PLEKHM2Q8IWE5 1019 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 KLHDC4Q8TBB5 520 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 L3MBTL3Q96JM7 780 aaPredicted RBP12.15□□□□□ -0.46
CLK2-204ENST00000471047 NYXQ9GZU5 481 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 RTL9Q8NET4 1388 aa12.15□□□□□ -0.46
CLK2-204ENST00000471047 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
CLK2-204ENST00000471047 SASH1O94885 1247 aa12.14□□□□□ -0.47
CLK2-204ENST00000471047 HCLS1P14317 486 aaPredicted RBP12.14□□□□□ -0.47
CLK2-204ENST00000471047 RGS19P49795 217 aa12.14□□□□□ -0.47
CLK2-204ENST00000471047 G3BP1Q13283 466 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLK2-204ENST00000471047 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
CLK2-204ENST00000471047 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
CLK2-204ENST00000471047 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
CLK2-204ENST00000471047 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
CLK2-204ENST00000471047 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
CLK2-204ENST00000471047 WDR33Q9C0J8 1336 aaKnown RBP12.13□□□□□ -0.47
CLK2-204ENST00000471047 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 RIC1Q4ADV7 1423 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 CIAO1O76071 339 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 CCDC57Q2TAC2 916 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 DEFB115Q30KQ5 88 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
CLK2-204ENST00000471047 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 ATG9AQ7Z3C6 839 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
CLK2-204ENST00000471047 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 GREM2Q9H772 168 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
CLK2-204ENST00000471047 ITGA6P23229 1130 aa12.12□□□□□ -0.47
CLK2-204ENST00000471047 PDE6BP35913 854 aa12.12□□□□□ -0.47
CLK2-204ENST00000471047 MAP2K1Q02750 393 aaPredicted RBP12.12□□□□□ -0.47
CLK2-204ENST00000471047 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
CLK2-204ENST00000471047 OS9Q13438 667 aaPredicted RBP12.12□□□□□ -0.47
CLK2-204ENST00000471047 SF3B3Q15393 1217 aaKnown RBP12.12□□□□□ -0.47
CLK2-204ENST00000471047 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
CLK2-204ENST00000471047 NBPF5PQ86XG9 351 aaPredicted RBP12.12□□□□□ -0.47
CLK2-204ENST00000471047 SIL1Q9H173 461 aa12.12□□□□□ -0.47
CLK2-204ENST00000471047 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
CLK2-204ENST00000471047 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
CLK2-204ENST00000471047 CHMP3Q9Y3E7 222 aa12.12□□□□□ -0.47
CLK2-204ENST00000471047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
CLK2-204ENST00000471047 FER1L6Q2WGJ9 1857 aa12.12□□□□□ -0.47
CLK2-204ENST00000471047 COL11A2P13942 1736 aaPredicted RBP12.11□□□□□ -0.47
CLK2-204ENST00000471047 ANKRD31Q8N7Z5 1873 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 EYA2O00167 538 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 EPHX2P34913 555 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 IL15P40933 162 aaPredicted RBP12.11□□□□□ -0.47
CLK2-204ENST00000471047 PDE1AP54750 535 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
CLK2-204ENST00000471047 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
CLK2-204ENST00000471047 HACL1Q9UJ83 578 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 ABT1Q9ULW3 272 aaKnown RBP12.11□□□□□ -0.47
CLK2-204ENST00000471047 AOX1Q06278 1338 aa12.11□□□□□ -0.47
CLK2-204ENST00000471047 DICER1Q9UPY3 1922 aaKnown RBP12.1□□□□□ -0.47
CLK2-204ENST00000471047 FMR1Q06787 632 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLK2-204ENST00000471047 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
CLK2-204ENST00000471047 LRRC24Q50LG9 513 aa12.1□□□□□ -0.47
CLK2-204ENST00000471047 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
CLK2-204ENST00000471047 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
CLK2-204ENST00000471047 PUS3Q9BZE2 481 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms