RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CELF1Q92879 486 aaKnown RBP18.72■□□□□ 0.59
CDC42SE1-203ENST00000470278 SEC31BQ9NQW1 1179 aa18.72■□□□□ 0.59
CDC42SE1-203ENST00000470278 LRRFIP2Q9Y608 721 aaKnown RBP18.72■□□□□ 0.59
CDC42SE1-203ENST00000470278 GNAI2P04899 355 aa18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 COL13A1Q5TAT6 717 aaPredicted RBP18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 CC2D2BQ6DHV5 1058 aa18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 CCDC85AQ96PX6 553 aaPredicted RBP18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 ATP6V0A2Q9Y487 856 aa18.71■□□□□ 0.59
CDC42SE1-203ENST00000470278 RPS8P62241 208 aaKnown RBP18.7■□□□□ 0.58
CDC42SE1-203ENST00000470278 IFIT5Q13325 482 aaKnown RBP18.7■□□□□ 0.58
CDC42SE1-203ENST00000470278 MTX1Q13505 466 aa18.7■□□□□ 0.58
CDC42SE1-203ENST00000470278 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
CDC42SE1-203ENST00000470278 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
CDC42SE1-203ENST00000470278 A0A1B0GUL6 1792 aa18.7■□□□□ 0.58
CDC42SE1-203ENST00000470278 ANKRD18BA2A2Z9 1011 aa18.69■□□□□ 0.58
CDC42SE1-203ENST00000470278 CCDC57Q2TAC2 916 aa18.69■□□□□ 0.58
CDC42SE1-203ENST00000470278 CCDC93Q567U6 631 aa18.69■□□□□ 0.58
CDC42SE1-203ENST00000470278 ANKRD18AQ8IVF6 992 aa18.69■□□□□ 0.58
CDC42SE1-203ENST00000470278 SP8Q8IXZ3 490 aa18.69■□□□□ 0.58
CDC42SE1-203ENST00000470278 DUOX1Q9NRD9 1551 aa18.68■□□□□ 0.58
CDC42SE1-203ENST00000470278 SLC51AQ86UW1 340 aa18.68■□□□□ 0.58
CDC42SE1-203ENST00000470278 TAOK3Q9H2K8 898 aa18.68■□□□□ 0.58
CDC42SE1-203ENST00000470278 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
CDC42SE1-203ENST00000470278 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
CDC42SE1-203ENST00000470278 RTKN2Q8IZC4 609 aa18.67■□□□□ 0.58
CDC42SE1-203ENST00000470278 ZBTB40Q9NUA8 1239 aa18.67■□□□□ 0.58
CDC42SE1-203ENST00000470278 BSDC1Q9NW68 430 aaPredicted RBP18.67■□□□□ 0.58
CDC42SE1-203ENST00000470278 DDNO94850 711 aaPredicted RBP18.66■□□□□ 0.58
CDC42SE1-203ENST00000470278 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
CDC42SE1-203ENST00000470278 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
CDC42SE1-203ENST00000470278 RFX5P48382 616 aaPredicted RBP18.65■□□□□ 0.58
CDC42SE1-203ENST00000470278 PSMD1Q99460 953 aa18.65■□□□□ 0.58
CDC42SE1-203ENST00000470278 ZNF541Q9H0D2 1346 aa18.65■□□□□ 0.58
CDC42SE1-203ENST00000470278 MPHOSPH8Q99549 860 aa18.64■□□□□ 0.57
CDC42SE1-203ENST00000470278 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDC42SE1-203ENST00000470278 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
CDC42SE1-203ENST00000470278 L3MBTL3Q96JM7 780 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE1-203ENST00000470278 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
CDC42SE1-203ENST00000470278 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
CDC42SE1-203ENST00000470278 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
CDC42SE1-203ENST00000470278 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
CDC42SE1-203ENST00000470278 PTPN12Q05209 780 aaKnown RBP18.62■□□□□ 0.57
CDC42SE1-203ENST00000470278 C1orf115Q9H7X2 142 aa18.62■□□□□ 0.57
CDC42SE1-203ENST00000470278 MINPP1Q9UNW1 487 aa18.62■□□□□ 0.57
CDC42SE1-203ENST00000470278 XDHP47989 1333 aa18.62■□□□□ 0.57
CDC42SE1-203ENST00000470278 PASKQ96RG2 1323 aa18.61■□□□□ 0.57
CDC42SE1-203ENST00000470278 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
CDC42SE1-203ENST00000470278 DPP8Q6V1X1 898 aaPredicted RBP18.61■□□□□ 0.57
CDC42SE1-203ENST00000470278 LDHAL6AQ6ZMR3 332 aa18.61■□□□□ 0.57
CDC42SE1-203ENST00000470278 MPNDQ8N594 471 aa18.61■□□□□ 0.57
CDC42SE1-203ENST00000470278 ZNF594Q96JF6 807 aaPredicted RBP18.61■□□□□ 0.57
CDC42SE1-203ENST00000470278 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
CDC42SE1-203ENST00000470278 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 AAMPQ13685 434 aa18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 POLA2Q14181 598 aa18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 SSH3Q8TE77 659 aa18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 ANKRD2Q9GZV1 360 aa18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 ZNF277Q9NRM2 450 aaPredicted RBP18.6■□□□□ 0.57
CDC42SE1-203ENST00000470278 MROH5Q6ZUA9 1318 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 CIAO1O76071 339 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 HSPA1AP0DMV8 641 aaKnown RBP18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 HSPA1BP0DMV9 641 aaKnown RBP18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 GPSM2P81274 684 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 DPY19L2Q6NUT2 758 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 SUPT20HQ8NEM7 779 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 CRBNQ96SW2 442 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 VPS33BQ9H267 617 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 CNNM1Q9NRU3 951 aa18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 NSFL1CQ9UNZ2 370 aaKnown RBP18.59■□□□□ 0.57
CDC42SE1-203ENST00000470278 EYA2O00167 538 aa18.58■□□□□ 0.56
CDC42SE1-203ENST00000470278 CHRNDQ07001 517 aa18.58■□□□□ 0.56
CDC42SE1-203ENST00000470278 KLHDC4Q8TBB5 520 aa18.58■□□□□ 0.56
CDC42SE1-203ENST00000470278 TAF1DQ9H5J8 278 aaPredicted RBP18.58■□□□□ 0.56
CDC42SE1-203ENST00000470278 ANKIB1Q9P2G1 1089 aa18.58■□□□□ 0.56
CDC42SE1-203ENST00000470278 RIPOR2Q9Y4F9 1068 aa18.58■□□□□ 0.56
CDC42SE1-203ENST00000470278 TBC1D16Q8TBP0 767 aa18.57■□□□□ 0.56
CDC42SE1-203ENST00000470278 PUS3Q9BZE2 481 aaKnown RBP18.57■□□□□ 0.56
CDC42SE1-203ENST00000470278 THSD7BQ9C0I4 1608 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 ITGBL1O95965 494 aaPredicted RBP18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 ATP2B4P23634 1241 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 LRRC24Q50LG9 513 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 POLLQ9UGP5 575 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 GGA1Q9UJY5 639 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 LEMD3Q9Y2U8 911 aa18.56■□□□□ 0.56
CDC42SE1-203ENST00000470278 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
CDC42SE1-203ENST00000470278 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
CDC42SE1-203ENST00000470278 IARSP41252 1262 aaKnown RBP18.55■□□□□ 0.56
CDC42SE1-203ENST00000470278 KIAA2012Q0VF49 1180 aa18.55■□□□□ 0.56
CDC42SE1-203ENST00000470278 ATG9AQ7Z3C6 839 aa18.55■□□□□ 0.56
CDC42SE1-203ENST00000470278 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms