RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 CNTN3Q9P232 1028 aa6.85□□□□□ -1.31
SRRM1-208ENST00000470243 MYO15BQ96JP2 1530 aa6.85□□□□□ -1.31
SRRM1-208ENST00000470243 EREGO14944 169 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 POLR3DP05423 398 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-208ENST00000470243 NEFLP07196 543 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-208ENST00000470243 CCINQ13939 588 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 MRPL58Q14197 206 aaKnown RBP6.84□□□□□ -1.31
SRRM1-208ENST00000470243 C1orf127Q8N9H9 656 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 SLC30A3Q99726 388 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 DNAJC25Q9H1X3 360 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 ZFYVE28Q9HCC9 887 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 ZFATQ9P243 1243 aa6.84□□□□□ -1.31
SRRM1-208ENST00000470243 THOC2Q8NI27 1593 aaKnown RBP6.83□□□□□ -1.32
SRRM1-208ENST00000470243 CYP2E1P05181 493 aaPredicted RBP6.83□□□□□ -1.32
SRRM1-208ENST00000470243 NFKB1P19838 968 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 VAMP1P23763 118 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 TARSP26639 723 aaKnown RBP6.83□□□□□ -1.32
SRRM1-208ENST00000470243 SNRPNP63162 240 aaKnown RBP6.83□□□□□ -1.32
SRRM1-208ENST00000470243 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 PSMD2Q13200 908 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 FBF1Q8TES7 1133 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 MARK1Q9P0L2 795 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 KANSL3Q9P2N6 904 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 ATXN7L1Q9ULK2 861 aaPredicted RBP6.83□□□□□ -1.32
SRRM1-208ENST00000470243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.83□□□□□ -1.32
SRRM1-208ENST00000470243 ERCC6Q03468 1493 aa6.83□□□□□ -1.32
SRRM1-208ENST00000470243 MMP20O60882 483 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 FURINP09958 794 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 RARAP10276 462 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 FGFR3P22607 806 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 BAG6P46379 1132 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 DAB2P98082 770 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 FGD1P98174 961 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 LAMC2Q13753 1193 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 TSNAXIP1Q2TAA8 658 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 TMC4Q7Z404 712 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 Q8N3U1 123 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 EPS8L3Q8TE67 593 aaKnown RBP6.82□□□□□ -1.32
SRRM1-208ENST00000470243 CCDC74AQ96AQ1 378 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 GMCL1Q96IK5 515 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 NPHS2Q9NP85 383 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
SRRM1-208ENST00000470243 KRBA1A5PL33 1030 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 MX2P20592 715 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 GNA15P30679 374 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.81□□□□□ -1.32
SRRM1-208ENST00000470243 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-208ENST00000470243 BHMTQ93088 406 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 PNMA5Q96PV4 448 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 BCL11AQ9H165 835 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 MRS2Q9HD23 443 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 C11orf16Q9NQ32 467 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 VTI1BQ9UEU0 232 aa6.81□□□□□ -1.32
SRRM1-208ENST00000470243 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-208ENST00000470243 SORBS3O60504 671 aa6.8□□□□□ -1.32
SRRM1-208ENST00000470243 CES1P23141 567 aa6.8□□□□□ -1.32
SRRM1-208ENST00000470243 CTBSQ01459 385 aa6.8□□□□□ -1.32
SRRM1-208ENST00000470243 TRERF1Q96PN7 1200 aa6.8□□□□□ -1.32
SRRM1-208ENST00000470243 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
SRRM1-208ENST00000470243 SCRIBQ14160 1630 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 OIP5O43482 229 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 TCF3P15923 654 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 LDLRAD1Q5T700 205 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 GALNT12Q8IXK2 581 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 BACH2Q9BYV9 841 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 PHF24Q9UPV7 400 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 SPG7Q9UQ90 795 aa6.79□□□□□ -1.32
SRRM1-208ENST00000470243 COL13A1Q5TAT6 717 aaPredicted RBP6.78□□□□□ -1.32
SRRM1-208ENST00000470243 PSMG3-AS1Q96PY0 264 aa6.78□□□□□ -1.32
SRRM1-208ENST00000470243 OSBPL7Q9BZF2 842 aa6.78□□□□□ -1.32
SRRM1-208ENST00000470243 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 C2CD2LO14523 706 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 GADD45BO75293 160 aaPredicted RBP6.77□□□□□ -1.33
SRRM1-208ENST00000470243 ACPPP15309 386 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 COL8A1P27658 744 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 FAM182BQ5T319 152 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.33
SRRM1-208ENST00000470243 NSUN5Q96P11 429 aaKnown RBP6.77□□□□□ -1.33
SRRM1-208ENST00000470243 OXCT2Q9BYC2 517 aaPredicted RBP6.77□□□□□ -1.33
SRRM1-208ENST00000470243 C12orf49Q9H741 205 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 NLRP2Q9NX02 1062 aa6.77□□□□□ -1.33
SRRM1-208ENST00000470243 TLR7Q9NYK1 1049 aaKnown RBP6.77□□□□□ -1.33
SRRM1-208ENST00000470243 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
SRRM1-208ENST00000470243 PSAPP07602 524 aa6.76□□□□□ -1.33
SRRM1-208ENST00000470243 CTSHP09668 335 aa6.76□□□□□ -1.33
SRRM1-208ENST00000470243 EIF4BP23588 611 aaKnown RBP6.76□□□□□ -1.33
SRRM1-208ENST00000470243 MLLT1Q03111 559 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-208ENST00000470243 PEAR1Q5VY43 1037 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-208ENST00000470243 C1orf229Q6ZS94 237 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-208ENST00000470243 PMEPA1Q969W9 287 aa6.76□□□□□ -1.33
SRRM1-208ENST00000470243 NSFL1CQ9UNZ2 370 aaKnown RBP6.76□□□□□ -1.33
SRRM1-208ENST00000470243 AK5Q9Y6K8 562 aa6.76□□□□□ -1.33
SRRM1-208ENST00000470243 A0A1W2PP55 124 aa6.75□□□□□ -1.33
SRRM1-208ENST00000470243 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
SRRM1-208ENST00000470243 BMP4P12644 408 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms