RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TAF1P21675 1872 aa13.14□□□□□ -0.31
SMC1A-206ENST00000470241 NFKBIEO00221 500 aa13.13□□□□□ -0.31
SMC1A-206ENST00000470241 CIAO1O76071 339 aa13.13□□□□□ -0.31
SMC1A-206ENST00000470241 CHRNDQ07001 517 aa13.13□□□□□ -0.31
SMC1A-206ENST00000470241 ATG9AQ7Z3C6 839 aa13.13□□□□□ -0.31
SMC1A-206ENST00000470241 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
SMC1A-206ENST00000470241 SIL1Q9H173 461 aa13.13□□□□□ -0.31
SMC1A-206ENST00000470241 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
SMC1A-206ENST00000470241 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
SMC1A-206ENST00000470241 NOP58Q9Y2X3 529 aaKnown RBP13.13□□□□□ -0.31
SMC1A-206ENST00000470241 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 HMMRO75330 724 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 GRIPAP1Q4V328 841 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 MPNDQ8N594 471 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 HELBQ8NG08 1087 aaPredicted RBP13.12□□□□□ -0.31
SMC1A-206ENST00000470241 PODXL2Q9NZ53 605 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
SMC1A-206ENST00000470241 LRRC37AA6NMS7 1700 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 XDHP47989 1333 aa13.12□□□□□ -0.31
SMC1A-206ENST00000470241 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
SMC1A-206ENST00000470241 TAF5LO75529 589 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
SMC1A-206ENST00000470241 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
SMC1A-206ENST00000470241 PRELPP51888 382 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMC1A-206ENST00000470241 DPP8Q6V1X1 898 aaPredicted RBP13.11□□□□□ -0.31
SMC1A-206ENST00000470241 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 PSMD1Q99460 953 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
SMC1A-206ENST00000470241 ANKRD2Q9GZV1 360 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 ANKIB1Q9P2G1 1089 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 POLLQ9UGP5 575 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 MROH5Q6ZUA9 1318 aa13.11□□□□□ -0.31
SMC1A-206ENST00000470241 SNAP23O00161 211 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 RASSF7Q02833 373 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 METTL24Q5JXM2 366 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 TBC1D16Q8TBP0 767 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 GGA1Q9UJY5 639 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 DUOX1Q9NRD9 1551 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
SMC1A-206ENST00000470241 UFL1O94874 794 aa13.09□□□□□ -0.31
SMC1A-206ENST00000470241 SASH1O94885 1247 aa13.09□□□□□ -0.31
SMC1A-206ENST00000470241 ATP2B4P23634 1241 aa13.09□□□□□ -0.31
SMC1A-206ENST00000470241 G3BP1Q13283 466 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMC1A-206ENST00000470241 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
SMC1A-206ENST00000470241 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
SMC1A-206ENST00000470241 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
SMC1A-206ENST00000470241 LEMD3Q9Y2U8 911 aa13.09□□□□□ -0.31
SMC1A-206ENST00000470241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.09□□□□□ -0.31
SMC1A-206ENST00000470241 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 C6orf229H3BNL8 230 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 PDE8BO95263 885 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 NEFLP07196 543 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 TFCP2Q12800 502 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.32
SMC1A-206ENST00000470241 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 DCTPP1Q9H773 170 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 CEP126Q9P2H0 1117 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 ZNF804BA4D1E1 1349 aa13.08□□□□□ -0.32
SMC1A-206ENST00000470241 SPEF2Q9C093 1822 aa13.07□□□□□ -0.32
SMC1A-206ENST00000470241 FGFR2P21802 821 aa13.07□□□□□ -0.32
SMC1A-206ENST00000470241 KLRK1P26718 216 aa13.07□□□□□ -0.32
SMC1A-206ENST00000470241 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
SMC1A-206ENST00000470241 IRS2Q9Y4H2 1338 aa13.07□□□□□ -0.32
SMC1A-206ENST00000470241 IGHDP01880 384 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 LMNB1P20700 586 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 IARSP41252 1262 aaKnown RBP13.06□□□□□ -0.32
SMC1A-206ENST00000470241 KCNJ4P48050 445 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 KIAA2012Q0VF49 1180 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
SMC1A-206ENST00000470241 HSP90AB4PQ58FF6 505 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 FER1L6Q2WGJ9 1857 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 MED23Q9ULK4 1368 aa13.06□□□□□ -0.32
SMC1A-206ENST00000470241 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 RAB11FIP3O75154 756 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 AOC3Q16853 763 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 WASHC4Q2M389 1173 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 C15orf52Q6ZUT6 534 aaKnown RBP13.05□□□□□ -0.32
SMC1A-206ENST00000470241 ERC1Q8IUD2 1116 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 RHPN1Q8TCX5 695 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 LPIN2Q92539 896 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 EYA3Q99504 573 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
SMC1A-206ENST00000470241 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
SMC1A-206ENST00000470241 GOLGB1Q14789 3259 aaKnown RBP13.05□□□□□ -0.32
SMC1A-206ENST00000470241 APBB1O00213 710 aa13.04□□□□□ -0.32
SMC1A-206ENST00000470241 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
SMC1A-206ENST00000470241 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
SMC1A-206ENST00000470241 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
SMC1A-206ENST00000470241 KIF1BPQ96EK5 621 aa13.04□□□□□ -0.32
SMC1A-206ENST00000470241 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
SMC1A-206ENST00000470241 GPR108Q9NPR9 543 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms