RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 EYA2O00167 538 aa15.7■□□□□ 0.1
SPTLC1-204ENST00000469778 ATP2B4P23634 1241 aa15.7■□□□□ 0.1
SPTLC1-204ENST00000469778 PTPN12Q05209 780 aaKnown RBP15.7■□□□□ 0.1
SPTLC1-204ENST00000469778 EYA3Q99504 573 aa15.7■□□□□ 0.1
SPTLC1-204ENST00000469778 ANKIB1Q9P2G1 1089 aa15.7■□□□□ 0.1
SPTLC1-204ENST00000469778 NSFL1CQ9UNZ2 370 aaKnown RBP15.7■□□□□ 0.1
SPTLC1-204ENST00000469778 RIPOR2Q9Y4F9 1068 aa15.7■□□□□ 0.1
SPTLC1-204ENST00000469778 LMNB1P20700 586 aa15.69■□□□□ 0.1
SPTLC1-204ENST00000469778 IL15P40933 162 aaPredicted RBP15.69■□□□□ 0.1
SPTLC1-204ENST00000469778 POLA2Q14181 598 aa15.69■□□□□ 0.1
SPTLC1-204ENST00000469778 HSP90AB4PQ58FF6 505 aa15.69■□□□□ 0.1
SPTLC1-204ENST00000469778 CEP85Q6P2H3 762 aa15.69■□□□□ 0.1
SPTLC1-204ENST00000469778 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
SPTLC1-204ENST00000469778 GGA1Q9UJY5 639 aa15.68■□□□□ 0.1
SPTLC1-204ENST00000469778 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
SPTLC1-204ENST00000469778 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
SPTLC1-204ENST00000469778 ZC3H4Q9UPT8 1303 aaKnown RBP15.68■□□□□ 0.1
SPTLC1-204ENST00000469778 NFKBIEO00221 500 aa15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 GPSM2P81274 684 aa15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 CHRNDQ07001 517 aa15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 G3BP1Q13283 466 aaKnown RBP eCLIP15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 TBC1D16Q8TBP0 767 aa15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 ZNF594Q96JF6 807 aaPredicted RBP15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 CRBNQ96SW2 442 aa15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 SNED1Q8TER0 1413 aa15.67■□□□□ 0.1
SPTLC1-204ENST00000469778 PNMA6EA0A0J9YXQ4 647 aa15.66■□□□□ 0.1
SPTLC1-204ENST00000469778 PDE8BO95263 885 aa15.66■□□□□ 0.1
SPTLC1-204ENST00000469778 UBE4AQ14139 1066 aa15.66■□□□□ 0.1
SPTLC1-204ENST00000469778 C15orf52Q6ZUT6 534 aaKnown RBP15.66■□□□□ 0.1
SPTLC1-204ENST00000469778 ZC3H12CQ9C0D7 883 aaKnown RBP15.66■□□□□ 0.1
SPTLC1-204ENST00000469778 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
SPTLC1-204ENST00000469778 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 WASHC4Q2M389 1173 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 METTL24Q5JXM2 366 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 ERC1Q8IUD2 1116 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 JDP2Q8WYK2 163 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 C1orf115Q9H7X2 142 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 AKAP2Q9Y2D5 859 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 ZNF804BA4D1E1 1349 aa15.65■□□□□ 0.1
SPTLC1-204ENST00000469778 LRRC37AA6NMS7 1700 aa15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 SURF6O75683 361 aaKnown RBP15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 UFL1O94874 794 aa15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 IARSP41252 1262 aaKnown RBP15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 KCNJ4P48050 445 aa15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 KIAA2012Q0VF49 1180 aa15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 OLFM4Q6UX06 510 aa15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 ATG9AQ7Z3C6 839 aa15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 POLLQ9UGP5 575 aa15.64■□□□□ 0.09
SPTLC1-204ENST00000469778 RAB11FIP3O75154 756 aa15.63■□□□□ 0.09
SPTLC1-204ENST00000469778 LRRC24Q50LG9 513 aa15.63■□□□□ 0.09
SPTLC1-204ENST00000469778 KLHDC4Q8TBB5 520 aa15.63■□□□□ 0.09
SPTLC1-204ENST00000469778 PUS3Q9BZE2 481 aaKnown RBP15.63■□□□□ 0.09
SPTLC1-204ENST00000469778 FER1L6Q2WGJ9 1857 aa15.63■□□□□ 0.09
SPTLC1-204ENST00000469778 PUM3Q15397 648 aaKnown RBP15.62■□□□□ 0.09
SPTLC1-204ENST00000469778 SIRT2Q8IXJ6 389 aa15.62■□□□□ 0.09
SPTLC1-204ENST00000469778 LARGE2Q8N3Y3 721 aa15.62■□□□□ 0.09
SPTLC1-204ENST00000469778 GPR108Q9NPR9 543 aa15.62■□□□□ 0.09
SPTLC1-204ENST00000469778 MED23Q9ULK4 1368 aa15.62■□□□□ 0.09
SPTLC1-204ENST00000469778 TAF1P21675 1872 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 G3V3G9 751 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 PPIP5K2O43314 1243 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 OS9Q13438 667 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 HDAC1Q13547 482 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 DCAF8Q5TAQ9 597 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 C9orf131Q5VYM1 1079 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 VGLL2Q8N8G2 317 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 LPIN2Q92539 896 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 SIL1Q9H173 461 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 ZNF277Q9NRM2 450 aaPredicted RBP15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 PA2G4Q9UQ80 394 aaKnown RBP15.61■□□□□ 0.09
SPTLC1-204ENST00000469778 ZBTB22O15209 634 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 TAF5LO75529 589 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 NEFLP07196 543 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 RWDD1Q9H446 243 aaPredicted RBP15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 DCTPP1Q9H773 170 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 RNF181Q9P0P0 153 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 PCDHB15Q9Y5E8 787 aa15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 GOLGB1Q14789 3259 aaKnown RBP15.6■□□□□ 0.09
SPTLC1-204ENST00000469778 CACNA1SQ13698 1873 aa15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 SLC5A1P13866 664 aa15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 FGFR2P21802 821 aa15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 RASSF7Q02833 373 aa15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 CAVIN4Q5BKX8 364 aa15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 ERICH6BQ5W0A0 696 aa15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 DPY19L2Q6NUT2 758 aa15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 HELBQ8NG08 1087 aaPredicted RBP15.59■□□□□ 0.09
SPTLC1-204ENST00000469778 FZD9O00144 591 aa15.58■□□□□ 0.08
SPTLC1-204ENST00000469778 TNIP1Q15025 636 aa15.58■□□□□ 0.08
SPTLC1-204ENST00000469778 AOC3Q16853 763 aa15.58■□□□□ 0.08
SPTLC1-204ENST00000469778 ZNF804AQ7Z570 1209 aa15.58■□□□□ 0.08
SPTLC1-204ENST00000469778 KIF1BPQ96EK5 621 aa15.58■□□□□ 0.08
SPTLC1-204ENST00000469778 COL4A1P02462 1669 aa15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 SASH1O94885 1247 aa15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 HIBADHP31937 336 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms