RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
COL27A1-203ENST00000468565 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
COL27A1-203ENST00000468565 TBC1D16Q8TBP0 767 aa18.32■□□□□ 0.52
COL27A1-203ENST00000468565 PSME4Q14997 1843 aa18.32■□□□□ 0.52
COL27A1-203ENST00000468565 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 CSF1RP07333 972 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 EPHX2P34913 555 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 CHADLQ6NUI6 762 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 LDHDQ86WU2 507 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 SSH1Q8WYL5 1049 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 LMOD1P29536 600 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-203ENST00000468565 CXCL9Q07325 125 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 PNMA8AQ86V59 439 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-203ENST00000468565 BSDC1Q9NW68 430 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-203ENST00000468565 ANKIB1Q9P2G1 1089 aa18.31■□□□□ 0.52
COL27A1-203ENST00000468565 XDHP47989 1333 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 GRM8O00222 908 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 POTEJP0CG39 1038 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 SCNN1DP51172 638 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 CIAPIN1Q6FI81 312 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 SRCIN1Q9C0H9 1055 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 GGA1Q9UJY5 639 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
COL27A1-203ENST00000468565 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
COL27A1-203ENST00000468565 UFL1O94874 794 aa18.29■□□□□ 0.52
COL27A1-203ENST00000468565 TNIP1Q15025 636 aa18.29■□□□□ 0.52
COL27A1-203ENST00000468565 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
COL27A1-203ENST00000468565 ERICH6BQ5W0A0 696 aa18.29■□□□□ 0.52
COL27A1-203ENST00000468565 YDJCA8MPS7 323 aa18.28■□□□□ 0.52
COL27A1-203ENST00000468565 RIMBP2O15034 1052 aa18.28■□□□□ 0.52
COL27A1-203ENST00000468565 ITGA6P23229 1130 aa18.28■□□□□ 0.52
COL27A1-203ENST00000468565 IGHMBP2P38935 993 aaKnown RBP18.28■□□□□ 0.52
COL27A1-203ENST00000468565 ZC3H12CQ9C0D7 883 aaKnown RBP18.28■□□□□ 0.52
COL27A1-203ENST00000468565 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-203ENST00000468565 ATP2B4P23634 1241 aa18.27■□□□□ 0.52
COL27A1-203ENST00000468565 FOXO4P98177 505 aa18.27■□□□□ 0.52
COL27A1-203ENST00000468565 EAPPQ56P03 285 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-203ENST00000468565 MINPP1Q9UNW1 487 aa18.27■□□□□ 0.52
COL27A1-203ENST00000468565 DBNDD1Q9H9R9 158 aa18.27■□□□□ 0.51
COL27A1-203ENST00000468565 GPRC5DQ9NZD1 345 aa18.27■□□□□ 0.51
COL27A1-203ENST00000468565 ECE2O60344 883 aa18.26■□□□□ 0.51
COL27A1-203ENST00000468565 RAD17O75943 681 aa18.26■□□□□ 0.51
COL27A1-203ENST00000468565 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
COL27A1-203ENST00000468565 SMC4Q9NTJ3 1288 aa18.26■□□□□ 0.51
COL27A1-203ENST00000468565 ANKRD18BA2A2Z9 1011 aa18.25■□□□□ 0.51
COL27A1-203ENST00000468565 EPS15P42566 896 aa18.25■□□□□ 0.51
COL27A1-203ENST00000468565 USP50Q70EL3 339 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-203ENST00000468565 GPR101Q96P66 508 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-203ENST00000468565 UTYO14607 1347 aa18.25■□□□□ 0.51
COL27A1-203ENST00000468565 GMPSP49915 693 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-203ENST00000468565 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-203ENST00000468565 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
COL27A1-203ENST00000468565 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
COL27A1-203ENST00000468565 DOK7Q18PE1 504 aa18.24■□□□□ 0.51
COL27A1-203ENST00000468565 ADARB2Q9NS39 739 aaKnown RBP18.24■□□□□ 0.51
COL27A1-203ENST00000468565 MED23Q9ULK4 1368 aa18.24■□□□□ 0.51
COL27A1-203ENST00000468565 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
COL27A1-203ENST00000468565 CCT4P50991 539 aaKnown RBP18.23■□□□□ 0.51
COL27A1-203ENST00000468565 IFIT5Q13325 482 aaKnown RBP18.23■□□□□ 0.51
COL27A1-203ENST00000468565 EPHA10Q5JZY3 1008 aa18.23■□□□□ 0.51
COL27A1-203ENST00000468565 DNAJC5GQ8N7S2 189 aa18.23■□□□□ 0.51
COL27A1-203ENST00000468565 ANKRD2Q9GZV1 360 aa18.23■□□□□ 0.51
COL27A1-203ENST00000468565 LMBR1LQ6UX01 489 aa18.23■□□□□ 0.51
COL27A1-203ENST00000468565 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
COL27A1-203ENST00000468565 TRPM7Q96QT4 1865 aa18.23■□□□□ 0.51
COL27A1-203ENST00000468565 ZNF646O15015 1829 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-203ENST00000468565 G3V3G9 751 aa18.22■□□□□ 0.51
COL27A1-203ENST00000468565 PSMD14O00487 310 aa18.22■□□□□ 0.51
COL27A1-203ENST00000468565 ITGBL1O95965 494 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-203ENST00000468565 DCAF8Q5TAQ9 597 aa18.22■□□□□ 0.51
COL27A1-203ENST00000468565 DPF2Q92785 391 aa18.22■□□□□ 0.51
COL27A1-203ENST00000468565 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
COL27A1-203ENST00000468565 ZNF609O15014 1411 aa18.22■□□□□ 0.51
COL27A1-203ENST00000468565 NBPF7P0C2Y1 421 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-203ENST00000468565 RPS12P25398 132 aaKnown RBP18.21■□□□□ 0.51
COL27A1-203ENST00000468565 HTRA3P83110 453 aa18.21■□□□□ 0.51
COL27A1-203ENST00000468565 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
COL27A1-203ENST00000468565 RARSP54136 660 aaKnown RBP18.2■□□□□ 0.5
COL27A1-203ENST00000468565 CHRNDQ07001 517 aa18.2■□□□□ 0.5
COL27A1-203ENST00000468565 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
COL27A1-203ENST00000468565 PODNQ7Z5L7 613 aa18.2■□□□□ 0.5
COL27A1-203ENST00000468565 CNTROBQ8N137 903 aa18.2■□□□□ 0.5
COL27A1-203ENST00000468565 KAZALD1Q96I82 304 aa18.2■□□□□ 0.5
COL27A1-203ENST00000468565 TSHZ2Q9NRE2 1034 aa18.2■□□□□ 0.5
COL27A1-203ENST00000468565 CNOT7Q9UIV1 285 aaKnown RBP18.2■□□□□ 0.5
COL27A1-203ENST00000468565 MAP1SQ66K74 1059 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-203ENST00000468565 KLRG1Q96E93 195 aa18.19■□□□□ 0.5
COL27A1-203ENST00000468565 KCNQ5Q9NR82 932 aa18.19■□□□□ 0.5
COL27A1-203ENST00000468565 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
COL27A1-203ENST00000468565 H7C1D1 291 aa18.19■□□□□ 0.5
COL27A1-203ENST00000468565 VIL1P09327 827 aaKnown RBP18.19■□□□□ 0.5
COL27A1-203ENST00000468565 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
COL27A1-203ENST00000468565 CREBZFQ9NS37 354 aa18.19■□□□□ 0.5
COL27A1-203ENST00000468565 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
COL27A1-203ENST00000468565 ZBTB12Q9Y330 459 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-203ENST00000468565 WTIPA6NIX2 430 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-203ENST00000468565 RABL6Q3YEC7 729 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-203ENST00000468565 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms