RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
SSR3-205ENST00000467789 CLCN6P51797 869 aa13.25□□□□□ -0.29
SSR3-205ENST00000467789 FLIIQ13045 1269 aa13.25□□□□□ -0.29
SSR3-205ENST00000467789 TNIP1Q15025 636 aa13.25□□□□□ -0.29
SSR3-205ENST00000467789 EAPPQ56P03 285 aaPredicted RBP13.25□□□□□ -0.29
SSR3-205ENST00000467789 USP50Q70EL3 339 aaPredicted RBP13.25□□□□□ -0.29
SSR3-205ENST00000467789 EYA3Q99504 573 aa13.25□□□□□ -0.29
SSR3-205ENST00000467789 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
SSR3-205ENST00000467789 PASKQ96RG2 1323 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 VAMP4O75379 141 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 IGKV5-2P06315 115 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 SCNN1DP51172 638 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 CXCL9Q07325 125 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 CIAPIN1Q6FI81 312 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 SLC51AQ86UW1 340 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
SSR3-205ENST00000467789 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
SSR3-205ENST00000467789 ITGBL1O95965 494 aaPredicted RBP13.23□□□□□ -0.29
SSR3-205ENST00000467789 HTRA3P83110 453 aa13.23□□□□□ -0.29
SSR3-205ENST00000467789 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
SSR3-205ENST00000467789 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
SSR3-205ENST00000467789 CDC5LQ99459 802 aaKnown RBP13.23□□□□□ -0.29
SSR3-205ENST00000467789 ADARB2Q9NS39 739 aaKnown RBP13.23□□□□□ -0.29
SSR3-205ENST00000467789 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
SSR3-205ENST00000467789 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
SSR3-205ENST00000467789 RTL9Q8NET4 1388 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 C6orf229H3BNL8 230 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 H7C1W4 665 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 CTSWP56202 376 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 G2E3Q7L622 706 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
SSR3-205ENST00000467789 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
SSR3-205ENST00000467789 EPS15P42566 896 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 GPSM2P81274 684 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 GCKRQ14397 625 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 CWF19L2Q2TBE0 894 aaKnown RBP13.21□□□□□ -0.29
SSR3-205ENST00000467789 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 TTLL11Q8NHH1 800 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 TBC1D16Q8TBP0 767 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 PLA2G12BQ9BX93 195 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
SSR3-205ENST00000467789 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
SSR3-205ENST00000467789 SEC31BQ9NQW1 1179 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 POLLQ9UGP5 575 aa13.21□□□□□ -0.29
SSR3-205ENST00000467789 XDHP47989 1333 aa13.2□□□□□ -0.3
SSR3-205ENST00000467789 ZNF521Q96K83 1311 aa13.2□□□□□ -0.3
SSR3-205ENST00000467789 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
SSR3-205ENST00000467789 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
SSR3-205ENST00000467789 DPF2Q92785 391 aa13.2□□□□□ -0.3
SSR3-205ENST00000467789 BCL2L13Q9BXK5 485 aa13.2□□□□□ -0.3
SSR3-205ENST00000467789 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
SSR3-205ENST00000467789 COL4A1P02462 1669 aa13.19□□□□□ -0.3
SSR3-205ENST00000467789 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
SSR3-205ENST00000467789 RAD17O75943 681 aa13.19□□□□□ -0.3
SSR3-205ENST00000467789 RPS12P25398 132 aaKnown RBP13.19□□□□□ -0.3
SSR3-205ENST00000467789 GMPSP49915 693 aaPredicted RBP13.19□□□□□ -0.3
SSR3-205ENST00000467789 MAP1SQ66K74 1059 aaPredicted RBP13.19□□□□□ -0.3
SSR3-205ENST00000467789 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
SSR3-205ENST00000467789 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
SSR3-205ENST00000467789 H7C1D1 291 aa13.18□□□□□ -0.3
SSR3-205ENST00000467789 ECE2O60344 883 aa13.18□□□□□ -0.3
SSR3-205ENST00000467789 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
SSR3-205ENST00000467789 UFL1O94874 794 aa13.18□□□□□ -0.3
SSR3-205ENST00000467789 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
SSR3-205ENST00000467789 PGAP2Q9UHJ9 254 aa13.18□□□□□ -0.3
SSR3-205ENST00000467789 PCNTO95613 3336 aa13.18□□□□□ -0.3
SSR3-205ENST00000467789 TRPM7Q96QT4 1865 aa13.17□□□□□ -0.3
SSR3-205ENST00000467789 G3V3G9 751 aa13.17□□□□□ -0.3
SSR3-205ENST00000467789 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
SSR3-205ENST00000467789 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
SSR3-205ENST00000467789 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
SSR3-205ENST00000467789 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
SSR3-205ENST00000467789 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
SSR3-205ENST00000467789 PSME4Q14997 1843 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 ZNF609O15014 1411 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 E9PSI1 815 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 PSMD14O00487 310 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 CSF1RP07333 972 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
SSR3-205ENST00000467789 CASP7P55210 303 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
SSR3-205ENST00000467789 GREM2Q9H772 168 aa13.16□□□□□ -0.3
SSR3-205ENST00000467789 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
SSR3-205ENST00000467789 PODNQ7Z5L7 613 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 ANKRD2Q9GZV1 360 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 MINPP1Q9UNW1 487 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 MED23Q9ULK4 1368 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 SPEF2Q9C093 1822 aa13.15□□□□□ -0.3
SSR3-205ENST00000467789 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms