RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 GRIP2Q9C0E4 1043 aa8.47□□□□□ -1.05
PSME4-204ENST00000466539 PRKRIP1Q9H875 184 aaPredicted RBP8.47□□□□□ -1.05
PSME4-204ENST00000466539 USP3Q9Y6I4 520 aa8.47□□□□□ -1.05
PSME4-204ENST00000466539 PRR36Q9H6K5 1346 aa8.47□□□□□ -1.05
PSME4-204ENST00000466539 POLR3AO14802 1390 aaPredicted RBP8.47□□□□□ -1.05
PSME4-204ENST00000466539 LTBP4Q8N2S1 1624 aa8.47□□□□□ -1.05
PSME4-204ENST00000466539 MARF1Q9Y4F3 1742 aaKnown RBP8.46□□□□□ -1.05
PSME4-204ENST00000466539 LRRC7Q96NW7 1537 aa8.46□□□□□ -1.05
PSME4-204ENST00000466539 ATG7O95352 703 aa8.46□□□□□ -1.06
PSME4-204ENST00000466539 ESCO1Q5FWF5 840 aa8.46□□□□□ -1.06
PSME4-204ENST00000466539 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
PSME4-204ENST00000466539 STK26Q9P289 416 aa8.46□□□□□ -1.06
PSME4-204ENST00000466539 NOVA2Q9UNW9 492 aaKnown RBP8.46□□□□□ -1.06
PSME4-204ENST00000466539 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
PSME4-204ENST00000466539 MST1RQ04912 1400 aa8.46□□□□□ -1.06
PSME4-204ENST00000466539 KIF20BQ96Q89 1820 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 CCER2I3L3R5 266 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 HSPA2P54652 639 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 EPHA4P54764 986 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
PSME4-204ENST00000466539 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 NLRP3Q96P20 1036 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 CDK19Q9BWU1 502 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 SENP2Q9HC62 589 aa8.45□□□□□ -1.06
PSME4-204ENST00000466539 SMTNP53814 917 aa8.44□□□□□ -1.06
PSME4-204ENST00000466539 PRICKLE2Q7Z3G6 844 aa8.44□□□□□ -1.06
PSME4-204ENST00000466539 GAS2L2Q8NHY3 880 aa8.44□□□□□ -1.06
PSME4-204ENST00000466539 PANK3Q9H999 370 aa8.44□□□□□ -1.06
PSME4-204ENST00000466539 POGKQ9P215 609 aa8.44□□□□□ -1.06
PSME4-204ENST00000466539 NSD2O96028 1365 aa8.44□□□□□ -1.06
PSME4-204ENST00000466539 KIF1AQ12756 1690 aa8.43□□□□□ -1.06
PSME4-204ENST00000466539 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
PSME4-204ENST00000466539 CARNS1A5YM72 827 aa8.43□□□□□ -1.06
PSME4-204ENST00000466539 GPC1P35052 558 aa8.43□□□□□ -1.06
PSME4-204ENST00000466539 SEC13P55735 322 aa8.43□□□□□ -1.06
PSME4-204ENST00000466539 ELOAQ14241 798 aaKnown RBP8.43□□□□□ -1.06
PSME4-204ENST00000466539 MTFR1Q15390 333 aa8.43□□□□□ -1.06
PSME4-204ENST00000466539 TLR1Q15399 786 aa8.43□□□□□ -1.06
PSME4-204ENST00000466539 IQSEC3Q9UPP2 1182 aaPredicted RBP8.43□□□□□ -1.06
PSME4-204ENST00000466539 BRD4O60885 1362 aaPredicted RBP8.43□□□□□ -1.06
PSME4-204ENST00000466539 A6NJY4 79 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 RHOQP17081 205 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 POU4F2Q12837 409 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 SLC27A3Q5K4L6 730 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 FAM200AQ8TCP9 573 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 KIFC2Q96AC6 838 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 ZSCAN10Q96SZ4 725 aaPredicted RBP8.42□□□□□ -1.06
PSME4-204ENST00000466539 SLC12A5Q9H2X9 1139 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 EDC4Q6P2E9 1401 aaKnown RBP8.42□□□□□ -1.06
PSME4-204ENST00000466539 PPIP5K1Q6PFW1 1433 aa8.42□□□□□ -1.06
PSME4-204ENST00000466539 USP6P35125 1406 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 INSRP06213 1382 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 MAN1A2O60476 641 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 FOXK2Q01167 660 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 RALBP1Q15311 655 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 TMEM164Q5U3C3 297 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 LYSMD3Q7Z3D4 306 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 ZNF775Q96BV0 537 aaPredicted RBP8.41□□□□□ -1.06
PSME4-204ENST00000466539 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
PSME4-204ENST00000466539 SCHIP1Q9P0W5 487 aaPredicted RBP8.41□□□□□ -1.06
PSME4-204ENST00000466539 SLAIN2Q9P270 581 aa8.41□□□□□ -1.06
PSME4-204ENST00000466539 PIK3C2AO00443 1686 aa8.4□□□□□ -1.06
PSME4-204ENST00000466539 PHRF1Q9P1Y6 1649 aaKnown RBP8.4□□□□□ -1.06
PSME4-204ENST00000466539 OVOS2A0A0J9YW53 1432 aa8.4□□□□□ -1.06
PSME4-204ENST00000466539 OVOS2Q6IE36 1432 aa8.4□□□□□ -1.06
PSME4-204ENST00000466539 SMG6Q86US8 1419 aaKnown RBP8.4□□□□□ -1.06
PSME4-204ENST00000466539 NSD3Q9BZ95 1437 aa8.4□□□□□ -1.06
PSME4-204ENST00000466539 TMEM94Q12767 1356 aa8.4□□□□□ -1.06
PSME4-204ENST00000466539 M0R2N6 131 aa8.4□□□□□ -1.06
PSME4-204ENST00000466539 BACH1O14867 736 aa8.4□□□□□ -1.06
PSME4-204ENST00000466539 TSPAN10Q9H1Z9 355 aaPredicted RBP8.4□□□□□ -1.06
PSME4-204ENST00000466539 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.07
PSME4-204ENST00000466539 ALS2Q96Q42 1657 aa8.4□□□□□ -1.07
PSME4-204ENST00000466539 C1orf167Q5SNV9 1468 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 USP31Q70CQ4 1352 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 SENP3-EIF4A1A0A087X0R7 540 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 SPATA31C2B4DYI2 1134 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 CDK2AP1O14519 115 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 C21orf2O43822 256 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 PHKA2P46019 1235 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 SAFB2Q14151 953 aaKnown RBP eCLIP8.39□□□□□ -1.07
PSME4-204ENST00000466539 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.39□□□□□ -1.07
PSME4-204ENST00000466539 HINFPQ9BQA5 517 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 CABP1Q9NZU7 370 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 SHPRHQ149N8 1683 aa8.39□□□□□ -1.07
PSME4-204ENST00000466539 TMEM88BA6NKF7 163 aa8.38□□□□□ -1.07
PSME4-204ENST00000466539 ANP32CO43423 234 aa8.38□□□□□ -1.07
PSME4-204ENST00000466539 C4orf17Q53FE4 359 aa8.38□□□□□ -1.07
PSME4-204ENST00000466539 NBPF10Q6P3W6 841 aaKnown RBP8.38□□□□□ -1.07
PSME4-204ENST00000466539 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
PSME4-204ENST00000466539 NBPF15Q8N660 670 aa8.38□□□□□ -1.07
PSME4-204ENST00000466539 C19orf44Q9H6X5 657 aa8.38□□□□□ -1.07
PSME4-204ENST00000466539 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
PSME4-204ENST00000466539 NHSL1Q5SYE7 1610 aa8.38□□□□□ -1.07
PSME4-204ENST00000466539 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
PSME4-204ENST00000466539 PNPLA6Q8IY17 1366 aa8.37□□□□□ -1.07
PSME4-204ENST00000466539 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
PSME4-204ENST00000466539 FYB1O15117 783 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms