RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CYP2E1P05181 493 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 IRS1P35568 1242 aa7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 DHX32Q7L7V1 743 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 TRPM4Q8TD43 1214 aa7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 RNF34Q969K3 372 aa7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 BCO2Q9BYV7 579 aa7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 ZFYVE1Q9HBF4 777 aa7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 USP31Q70CQ4 1352 aa7.07□□□□□ -1.28
CDC42BPA-211ENST00000466538 A0A1W2PP55 124 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 POTECB2RU33 542 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 SIN3BO75182 1162 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 CTSHP09668 335 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 XRCC5P13010 732 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 CTBSQ01459 385 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 GRIN2CQ14957 1233 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 NXPE4Q6UWF7 544 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 PI16Q6UXB8 463 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 NCAPG2Q86XI2 1143 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
CDC42BPA-211ENST00000466538 GSTT1P30711 240 aa7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 ST13P50502 369 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 GPLD1P80108 840 aa7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 GRM2Q14416 872 aa7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 TAF1CQ15572 869 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 ZNF468Q5VIY5 522 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 PEAR1Q5VY43 1037 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 CEP120Q8N960 986 aa7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 EHD4Q9H223 541 aa7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 KANSL3Q9P2N6 904 aa7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 NXF1Q9UBU9 619 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-211ENST00000466538 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 BMP4P12644 408 aa7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 ZNF76P36508 570 aa7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 SIK1P57059 783 aa7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 HDLBPQ00341 1268 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 FANCCQ00597 558 aa7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 PRPF40BQ6NWY9 871 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 C8orf37Q96NL8 207 aa7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 NSFL1CQ9UNZ2 370 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-211ENST00000466538 GPR25O00155 361 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 USP17L7P0C7H9 530 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 MX2P20592 715 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 SYT9Q86SS6 491 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 GLIS3Q8NEA6 775 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 OSMRQ99650 979 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 RBSNQ9H1K0 784 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 LIN7BQ9HAP6 207 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 DZANK1Q9NVP4 752 aa7.03□□□□□ -1.28
CDC42BPA-211ENST00000466538 ZBTB42B2RXF5 422 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 C2CD2LO14523 706 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 LCE2BO14633 110 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 ARAFP10398 606 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 ERCC5P28715 1186 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 MAP2K3P46734 347 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 ZC3H6P61129 1189 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 PTPN12Q05209 780 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 CCNJLQ8IV13 435 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 TNFRSF25Q93038 417 aa7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-211ENST00000466538 TMEM238LA0A1B0GVL6 79 aa7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 ADARB2-AS1A8MUL3 147 aa7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 RAB44Q7Z6P3 723 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 TCF12Q99081 682 aa7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 ZKSCAN3Q9BRR0 538 aa7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 NOC4LQ9BVI4 516 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 BHLHE41Q9C0J9 482 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 TGIF2Q9GZN2 237 aa7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 LATS2Q9NRM7 1088 aa7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 PPM1HQ9ULR3 514 aa7.01□□□□□ -1.29
CDC42BPA-211ENST00000466538 NFKBIEO00221 500 aa7□□□□□ -1.29
CDC42BPA-211ENST00000466538 GHRHP01286 108 aa7□□□□□ -1.29
CDC42BPA-211ENST00000466538 ADH6P28332 368 aa7□□□□□ -1.29
CDC42BPA-211ENST00000466538 NXPE3Q969Y0 559 aa7□□□□□ -1.29
CDC42BPA-211ENST00000466538 NSUN5Q96P11 429 aaKnown RBP7□□□□□ -1.29
CDC42BPA-211ENST00000466538 PBX4Q9BYU1 374 aa7□□□□□ -1.29
CDC42BPA-211ENST00000466538 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
CDC42BPA-211ENST00000466538 MBIPQ9NS73 344 aa7□□□□□ -1.29
CDC42BPA-211ENST00000466538 DNAJB12Q9NXW2 375 aaKnown RBP7□□□□□ -1.29
CDC42BPA-211ENST00000466538 J3QW42 95 aa6.99□□□□□ -1.29
CDC42BPA-211ENST00000466538 C9orf131Q5VYM1 1079 aa6.99□□□□□ -1.29
CDC42BPA-211ENST00000466538 HS2ST1Q7LGA3 356 aa6.99□□□□□ -1.29
CDC42BPA-211ENST00000466538 C3orf58Q8NDZ4 430 aa6.99□□□□□ -1.29
CDC42BPA-211ENST00000466538 IGFLR1Q9H665 355 aa6.99□□□□□ -1.29
CDC42BPA-211ENST00000466538 ABCB6Q9NP58 842 aa6.99□□□□□ -1.29
CDC42BPA-211ENST00000466538 H3BM21 787 aa6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 VSIG8P0DPA2 414 aa6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 RLBP1P12271 317 aa6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 ITPKAP23677 461 aa6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 FCGRTP55899 365 aa6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 PCBP4P57723 403 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 RAD51AP2Q09MP3 1159 aa6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 GAS6Q14393 721 aa6.98□□□□□ -1.29
CDC42BPA-211ENST00000466538 RPS26P11Q5JNZ5 115 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms