RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 FAM155AB1AL88 458 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-220ENST00000464800 DOK7Q18PE1 504 aa19.03■□□□□ 0.64
MCF2L-220ENST00000464800 KIF4BQ2VIQ3 1234 aa19.03■□□□□ 0.64
MCF2L-220ENST00000464800 RBM26Q5T8P6 1007 aaKnown RBP19.03■□□□□ 0.64
MCF2L-220ENST00000464800 CCDC102AQ96A19 550 aa19.03■□□□□ 0.64
MCF2L-220ENST00000464800 SAGE1Q9NXZ1 904 aa19.03■□□□□ 0.64
MCF2L-220ENST00000464800 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-220ENST00000464800 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-220ENST00000464800 ZNF157P51786 506 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-220ENST00000464800 SULF1Q8IWU6 871 aa19.01■□□□□ 0.63
MCF2L-220ENST00000464800 TBC1D16Q8TBP0 767 aa19.01■□□□□ 0.63
MCF2L-220ENST00000464800 KCNQ5Q9NR82 932 aa19.01■□□□□ 0.63
MCF2L-220ENST00000464800 HYPKQ9NX55 129 aa19.01■□□□□ 0.63
MCF2L-220ENST00000464800 GGA3Q9NZ52 723 aa19.01■□□□□ 0.63
MCF2L-220ENST00000464800 RPS8P62241 208 aaKnown RBP19■□□□□ 0.63
MCF2L-220ENST00000464800 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
MCF2L-220ENST00000464800 G3V3G9 751 aa18.99■□□□□ 0.63
MCF2L-220ENST00000464800 KIF23Q02241 960 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-220ENST00000464800 TRIM28Q13263 835 aaKnown RBP18.99■□□□□ 0.63
MCF2L-220ENST00000464800 DCAF8Q5TAQ9 597 aa18.99■□□□□ 0.63
MCF2L-220ENST00000464800 RUNDC1Q96C34 613 aa18.99■□□□□ 0.63
MCF2L-220ENST00000464800 ZC3H12CQ9C0D7 883 aaKnown RBP18.99■□□□□ 0.63
MCF2L-220ENST00000464800 PODXL2Q9NZ53 605 aa18.99■□□□□ 0.63
MCF2L-220ENST00000464800 ZNF609O15014 1411 aa18.99■□□□□ 0.63
MCF2L-220ENST00000464800 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
MCF2L-220ENST00000464800 UFL1O94874 794 aa18.98■□□□□ 0.63
MCF2L-220ENST00000464800 SLC10A3P09131 477 aa18.98■□□□□ 0.63
MCF2L-220ENST00000464800 VIL1P09327 827 aaKnown RBP18.98■□□□□ 0.63
MCF2L-220ENST00000464800 HSP90B1P14625 803 aaKnown RBP18.98■□□□□ 0.63
MCF2L-220ENST00000464800 DUSP27Q5VZP5 1158 aa18.98■□□□□ 0.63
MCF2L-220ENST00000464800 ANKIB1Q9P2G1 1089 aa18.98■□□□□ 0.63
MCF2L-220ENST00000464800 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
MCF2L-220ENST00000464800 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
MCF2L-220ENST00000464800 RIC3Q7Z5B4 369 aa18.97■□□□□ 0.63
MCF2L-220ENST00000464800 ZBTB38Q8NAP3 1195 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-220ENST00000464800 CDCA5Q96FF9 252 aa18.97■□□□□ 0.63
MCF2L-220ENST00000464800 RNF186Q9NXI6 227 aa18.97■□□□□ 0.63
MCF2L-220ENST00000464800 GGA1Q9UJY5 639 aa18.97■□□□□ 0.63
MCF2L-220ENST00000464800 TRPA1O75762 1119 aa18.96■□□□□ 0.63
MCF2L-220ENST00000464800 GOLGA2Q08379 1002 aa18.96■□□□□ 0.63
MCF2L-220ENST00000464800 ASTN2O75129 1339 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-220ENST00000464800 SPEF2Q9C093 1822 aa18.95■□□□□ 0.62
MCF2L-220ENST00000464800 ZNF280AP59817 542 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-220ENST00000464800 CCDC152Q4G0S7 254 aa18.95■□□□□ 0.62
MCF2L-220ENST00000464800 AGBL3Q8NEM8 1001 aa18.95■□□□□ 0.62
MCF2L-220ENST00000464800 SEC31BQ9NQW1 1179 aa18.95■□□□□ 0.62
MCF2L-220ENST00000464800 ANGEL2Q5VTE6 544 aaKnown RBP18.94■□□□□ 0.62
MCF2L-220ENST00000464800 RSBN1LQ6PCB5 846 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-220ENST00000464800 MBIPQ9NS73 344 aa18.94■□□□□ 0.62
MCF2L-220ENST00000464800 MYH3P11055 1940 aa18.94■□□□□ 0.62
MCF2L-220ENST00000464800 PDE4DIPQ5VU43 2346 aa18.94■□□□□ 0.62
MCF2L-220ENST00000464800 TNRC18O15417 2968 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-220ENST00000464800 SCARF1Q14162 830 aa18.93■□□□□ 0.62
MCF2L-220ENST00000464800 RASAL3Q86YV0 1011 aa18.93■□□□□ 0.62
MCF2L-220ENST00000464800 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-220ENST00000464800 CSRNP1Q96S65 589 aa18.93■□□□□ 0.62
MCF2L-220ENST00000464800 SOX10P56693 466 aa18.92■□□□□ 0.62
MCF2L-220ENST00000464800 FKBP1BP68106 108 aa18.92■□□□□ 0.62
MCF2L-220ENST00000464800 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
MCF2L-220ENST00000464800 MYD88Q99836 296 aa18.92■□□□□ 0.62
MCF2L-220ENST00000464800 XDHP47989 1333 aa18.92■□□□□ 0.62
MCF2L-220ENST00000464800 PITPNM2Q9BZ72 1349 aa18.92■□□□□ 0.62
MCF2L-220ENST00000464800 ZNF646O15015 1829 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-220ENST00000464800 PDE8AO60658 829 aa18.91■□□□□ 0.62
MCF2L-220ENST00000464800 PCCAP05165 728 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-220ENST00000464800 CTU1Q7Z7A3 348 aaKnown RBP18.91■□□□□ 0.62
MCF2L-220ENST00000464800 PHAXQ9H814 394 aaKnown RBP18.91■□□□□ 0.62
MCF2L-220ENST00000464800 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
MCF2L-220ENST00000464800 USP17L8P0C7I0 530 aa18.9■□□□□ 0.62
MCF2L-220ENST00000464800 ANKRD18AQ8IVF6 992 aa18.9■□□□□ 0.62
MCF2L-220ENST00000464800 CCDC85AQ96PX6 553 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-220ENST00000464800 CWC25Q9NXE8 425 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-220ENST00000464800 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
MCF2L-220ENST00000464800 GMLQ99445 158 aa18.89■□□□□ 0.61
MCF2L-220ENST00000464800 USP17L3A6NCW0 530 aa18.88■□□□□ 0.61
MCF2L-220ENST00000464800 USP17L4A6NCW7 530 aa18.88■□□□□ 0.61
MCF2L-220ENST00000464800 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
MCF2L-220ENST00000464800 ATP2B4P23634 1241 aa18.88■□□□□ 0.61
MCF2L-220ENST00000464800 USP17L1Q7RTZ2 530 aa18.88■□□□□ 0.61
MCF2L-220ENST00000464800 PODNQ7Z5L7 613 aa18.88■□□□□ 0.61
MCF2L-220ENST00000464800 IFT57Q9NWB7 429 aa18.88■□□□□ 0.61
MCF2L-220ENST00000464800 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
MCF2L-220ENST00000464800 JARID2Q92833 1246 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-220ENST00000464800 CDC5LQ99459 802 aaKnown RBP18.87■□□□□ 0.61
MCF2L-220ENST00000464800 PCDH10Q9P2E7 1040 aa18.87■□□□□ 0.61
MCF2L-220ENST00000464800 MED23Q9ULK4 1368 aa18.87■□□□□ 0.61
MCF2L-220ENST00000464800 ELL2O00472 640 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-220ENST00000464800 GNAI1P63096 354 aa18.86■□□□□ 0.61
MCF2L-220ENST00000464800 CALD1Q05682 793 aaKnown RBP18.86■□□□□ 0.61
MCF2L-220ENST00000464800 METTL22Q9BUU2 404 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-220ENST00000464800 CTSWP56202 376 aa18.85■□□□□ 0.61
MCF2L-220ENST00000464800 MOB2Q70IA6 237 aa18.85■□□□□ 0.61
MCF2L-220ENST00000464800 SCAF8Q9UPN6 1271 aaKnown RBP18.85■□□□□ 0.61
MCF2L-220ENST00000464800 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
MCF2L-220ENST00000464800 TTLL12Q14166 644 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-220ENST00000464800 HDAC9Q9UKV0 1011 aa18.84■□□□□ 0.61
MCF2L-220ENST00000464800 MYO3BQ8WXR4 1341 aa18.83■□□□□ 0.61
MCF2L-220ENST00000464800 UBE2Q2LH0YL09 131 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 NF2P35240 595 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 PKN2Q16513 984 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms