RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 GPR108Q9NPR9 543 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 MINPP1Q9UNW1 487 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 CD2APQ9Y5K6 639 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 APBB1O00213 710 aa17.72■□□□□ 0.43
COL6A1-202ENST00000463060 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
COL6A1-202ENST00000463060 OS9Q13438 667 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-202ENST00000463060 C16orf71Q8IYS4 520 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-202ENST00000463060 LNPKQ9C0E8 428 aa17.72■□□□□ 0.43
COL6A1-202ENST00000463060 CEP126Q9P2H0 1117 aa17.72■□□□□ 0.43
COL6A1-202ENST00000463060 MROH5Q6ZUA9 1318 aa17.72■□□□□ 0.43
COL6A1-202ENST00000463060 SALL3Q9BXA9 1300 aa17.72■□□□□ 0.43
COL6A1-202ENST00000463060 SPEF2Q9C093 1822 aa17.71■□□□□ 0.43
COL6A1-202ENST00000463060 EAF2Q96CJ1 260 aaPredicted RBP17.71■□□□□ 0.43
COL6A1-202ENST00000463060 IL1RAPL2Q9NP60 686 aa17.71■□□□□ 0.43
COL6A1-202ENST00000463060 DLEC1Q9Y238 1755 aa17.71■□□□□ 0.43
COL6A1-202ENST00000463060 A0A0G2JLW4 131 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 PDE8BO95263 885 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 DPEP1P16444 411 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 FGFR2P21802 821 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 CHRNDQ07001 517 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 SLC51AQ86UW1 340 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 SKAP1Q86WV1 359 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
COL6A1-202ENST00000463060 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
COL6A1-202ENST00000463060 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
COL6A1-202ENST00000463060 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
COL6A1-202ENST00000463060 OTUD7AQ8TE49 926 aaPredicted RBP17.69■□□□□ 0.42
COL6A1-202ENST00000463060 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
COL6A1-202ENST00000463060 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
COL6A1-202ENST00000463060 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
COL6A1-202ENST00000463060 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
COL6A1-202ENST00000463060 CLASRPQ8N2M8 674 aaKnown RBP17.68■□□□□ 0.42
COL6A1-202ENST00000463060 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
COL6A1-202ENST00000463060 ZNF622Q969S3 477 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL6A1-202ENST00000463060 ATP6V0A2Q9Y487 856 aa17.68■□□□□ 0.42
COL6A1-202ENST00000463060 LRRC37AA6NMS7 1700 aa17.67■□□□□ 0.42
COL6A1-202ENST00000463060 TIMM10P62072 90 aa17.67■□□□□ 0.42
COL6A1-202ENST00000463060 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
COL6A1-202ENST00000463060 STAP2Q9UGK3 403 aa17.67■□□□□ 0.42
COL6A1-202ENST00000463060 ZNF609O15014 1411 aa17.66■□□□□ 0.42
COL6A1-202ENST00000463060 WTIPA6NIX2 430 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-202ENST00000463060 PPEF1O14829 653 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-202ENST00000463060 TAF5LO75529 589 aa17.66■□□□□ 0.42
COL6A1-202ENST00000463060 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
COL6A1-202ENST00000463060 ANKRD2Q9GZV1 360 aa17.66■□□□□ 0.42
COL6A1-202ENST00000463060 OSBPL3Q9H4L5 887 aa17.66■□□□□ 0.42
COL6A1-202ENST00000463060 PODXL2Q9NZ53 605 aa17.66■□□□□ 0.42
COL6A1-202ENST00000463060 AKAP2Q9Y2D5 859 aa17.66■□□□□ 0.42
COL6A1-202ENST00000463060 SNAP23O00161 211 aa17.65■□□□□ 0.42
COL6A1-202ENST00000463060 ATP2B3Q16720 1220 aa17.65■□□□□ 0.42
COL6A1-202ENST00000463060 AACSQ86V21 672 aa17.65■□□□□ 0.42
COL6A1-202ENST00000463060 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
COL6A1-202ENST00000463060 ZBTB47Q9UFB7 747 aaPredicted RBP17.65■□□□□ 0.42
COL6A1-202ENST00000463060 DBNLQ9UJU6 430 aaKnown RBP17.65■□□□□ 0.42
COL6A1-202ENST00000463060 IRS2Q9Y4H2 1338 aa17.65■□□□□ 0.42
COL6A1-202ENST00000463060 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
COL6A1-202ENST00000463060 SNED1Q8TER0 1413 aa17.64■□□□□ 0.42
COL6A1-202ENST00000463060 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
COL6A1-202ENST00000463060 A0A1B0GUL7 405 aa17.64■□□□□ 0.41
COL6A1-202ENST00000463060 GPSM2P81274 684 aa17.64■□□□□ 0.41
COL6A1-202ENST00000463060 UBE4AQ14139 1066 aa17.64■□□□□ 0.41
COL6A1-202ENST00000463060 PUM3Q15397 648 aaKnown RBP17.64■□□□□ 0.41
COL6A1-202ENST00000463060 TTLL6Q8N841 843 aa17.64■□□□□ 0.41
COL6A1-202ENST00000463060 LPIN2Q92539 896 aa17.64■□□□□ 0.41
COL6A1-202ENST00000463060 TLR7Q9NYK1 1049 aaKnown RBP17.64■□□□□ 0.41
COL6A1-202ENST00000463060 PIM2Q9P1W9 311 aa17.64■□□□□ 0.41
COL6A1-202ENST00000463060 PDE1AP54750 535 aa17.63■□□□□ 0.41
COL6A1-202ENST00000463060 OLFM4Q6UX06 510 aa17.63■□□□□ 0.41
COL6A1-202ENST00000463060 DBNDD2Q9BQY9 259 aa17.63■□□□□ 0.41
COL6A1-202ENST00000463060 LEMD3Q9Y2U8 911 aa17.63■□□□□ 0.41
COL6A1-202ENST00000463060 XDHP47989 1333 aa17.63■□□□□ 0.41
COL6A1-202ENST00000463060 IFIT2P09913 472 aaKnown RBP17.62■□□□□ 0.41
COL6A1-202ENST00000463060 ADORA1P30542 326 aa17.62■□□□□ 0.41
COL6A1-202ENST00000463060 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
COL6A1-202ENST00000463060 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
COL6A1-202ENST00000463060 FHDC1Q9C0D6 1143 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-202ENST00000463060 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
COL6A1-202ENST00000463060 MX1P20591 662 aa17.61■□□□□ 0.41
COL6A1-202ENST00000463060 ATP2B4P23634 1241 aa17.61■□□□□ 0.41
COL6A1-202ENST00000463060 CC2D2BQ6DHV5 1058 aa17.61■□□□□ 0.41
COL6A1-202ENST00000463060 XAGE2Q96GT9 111 aa17.61■□□□□ 0.41
COL6A1-202ENST00000463060 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-202ENST00000463060 POLLQ9UGP5 575 aa17.61■□□□□ 0.41
COL6A1-202ENST00000463060 ARAP2Q8WZ64 1704 aa17.61■□□□□ 0.41
COL6A1-202ENST00000463060 ZBTB22O15209 634 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 RGS3P49796 1198 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 TBC1D16Q8TBP0 767 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 ECHDC1Q9NTX5 307 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 NSFL1CQ9UNZ2 370 aaKnown RBP17.6■□□□□ 0.41
COL6A1-202ENST00000463060 ZNF804BA4D1E1 1349 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 AOX1Q06278 1338 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 TTC41PQ6P2S7 1318 aa17.6■□□□□ 0.41
COL6A1-202ENST00000463060 DUOX1Q9NRD9 1551 aa17.59■□□□□ 0.41
COL6A1-202ENST00000463060 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
COL6A1-202ENST00000463060 SLC5A1P13866 664 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms