RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 GBA2Q9HCG7 927 aaPredicted RBP20.49■□□□□ 0.87
SND1-203ENST00000463020 KIF23Q02241 960 aaPredicted RBP20.48■□□□□ 0.87
SND1-203ENST00000463020 LMOD3Q0VAK6 560 aa20.48■□□□□ 0.87
SND1-203ENST00000463020 IRS4O14654 1257 aaPredicted RBP20.47■□□□□ 0.87
SND1-203ENST00000463020 JARID2Q92833 1246 aaPredicted RBP20.47■□□□□ 0.87
SND1-203ENST00000463020 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
SND1-203ENST00000463020 SCAF8Q9UPN6 1271 aaKnown RBP20.47■□□□□ 0.87
SND1-203ENST00000463020 WTIPA6NIX2 430 aaPredicted RBP20.46■□□□□ 0.87
SND1-203ENST00000463020 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
SND1-203ENST00000463020 RPS12P25398 132 aaKnown RBP20.45■□□□□ 0.86
SND1-203ENST00000463020 RPS8P62241 208 aaKnown RBP20.45■□□□□ 0.86
SND1-203ENST00000463020 DUSP27Q5VZP5 1158 aa20.45■□□□□ 0.86
SND1-203ENST00000463020 PHAXQ9H814 394 aaKnown RBP20.45■□□□□ 0.86
SND1-203ENST00000463020 RNF186Q9NXI6 227 aa20.45■□□□□ 0.86
SND1-203ENST00000463020 DBF4Q9UBU7 674 aaPredicted RBP20.45■□□□□ 0.86
SND1-203ENST00000463020 VIL1P09327 827 aaKnown RBP20.44■□□□□ 0.86
SND1-203ENST00000463020 ZNF157P51786 506 aaPredicted RBP20.44■□□□□ 0.86
SND1-203ENST00000463020 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
SND1-203ENST00000463020 CDCA5Q96FF9 252 aa20.44■□□□□ 0.86
SND1-203ENST00000463020 CCDC85AQ96PX6 553 aaPredicted RBP20.44■□□□□ 0.86
SND1-203ENST00000463020 MBIPQ9NS73 344 aa20.44■□□□□ 0.86
SND1-203ENST00000463020 TRPA1O75762 1119 aa20.43■□□□□ 0.86
SND1-203ENST00000463020 UFL1O94874 794 aa20.43■□□□□ 0.86
SND1-203ENST00000463020 SLC10A3P09131 477 aa20.43■□□□□ 0.86
SND1-203ENST00000463020 RALBP1Q15311 655 aa20.43■□□□□ 0.86
SND1-203ENST00000463020 RUNDC1Q96C34 613 aa20.43■□□□□ 0.86
SND1-203ENST00000463020 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
SND1-203ENST00000463020 HOXB7P09629 217 aa20.42■□□□□ 0.86
SND1-203ENST00000463020 SOX10P56693 466 aa20.42■□□□□ 0.86
SND1-203ENST00000463020 TRIM28Q13263 835 aaKnown RBP20.42■□□□□ 0.86
SND1-203ENST00000463020 MOB2Q70IA6 237 aa20.42■□□□□ 0.86
SND1-203ENST00000463020 C2orf69Q8N8R5 385 aa20.42■□□□□ 0.86
SND1-203ENST00000463020 CSRNP1Q96S65 589 aa20.42■□□□□ 0.86
SND1-203ENST00000463020 EYA3Q99504 573 aa20.42■□□□□ 0.86
SND1-203ENST00000463020 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
SND1-203ENST00000463020 ANGEL2Q5VTE6 544 aaKnown RBP20.41■□□□□ 0.86
SND1-203ENST00000463020 HYPKQ9NX55 129 aa20.41■□□□□ 0.86
SND1-203ENST00000463020 ZNF280AP59817 542 aaPredicted RBP20.4■□□□□ 0.86
SND1-203ENST00000463020 SCARF1Q14162 830 aa20.4■□□□□ 0.86
SND1-203ENST00000463020 RASAL3Q86YV0 1011 aa20.4■□□□□ 0.86
SND1-203ENST00000463020 ZBTB38Q8NAP3 1195 aaPredicted RBP20.4■□□□□ 0.86
SND1-203ENST00000463020 GMLQ99445 158 aa20.4■□□□□ 0.86
SND1-203ENST00000463020 MYD88Q99836 296 aa20.4■□□□□ 0.86
SND1-203ENST00000463020 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
SND1-203ENST00000463020 SAGE1Q9NXZ1 904 aa20.4■□□□□ 0.86
SND1-203ENST00000463020 ELL2O00472 640 aaPredicted RBP20.39■□□□□ 0.85
SND1-203ENST00000463020 ZNF853P0CG23 659 aa20.39■□□□□ 0.85
SND1-203ENST00000463020 RSBN1LQ6PCB5 846 aaPredicted RBP20.39■□□□□ 0.85
SND1-203ENST00000463020 CCDC102AQ96A19 550 aa20.39■□□□□ 0.85
SND1-203ENST00000463020 MXD3Q9BW11 206 aa20.39■□□□□ 0.85
SND1-203ENST00000463020 ZC3H12CQ9C0D7 883 aaKnown RBP20.39■□□□□ 0.85
SND1-203ENST00000463020 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
SND1-203ENST00000463020 ZNF646O15015 1829 aaPredicted RBP20.39■□□□□ 0.85
SND1-203ENST00000463020 ZNF609O15014 1411 aa20.38■□□□□ 0.85
SND1-203ENST00000463020 PRAMEF18Q5VWM3 479 aa20.38■□□□□ 0.85
SND1-203ENST00000463020 RIC3Q7Z5B4 369 aa20.38■□□□□ 0.85
SND1-203ENST00000463020 SULF1Q8IWU6 871 aa20.38■□□□□ 0.85
SND1-203ENST00000463020 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
SND1-203ENST00000463020 PSME4Q14997 1843 aa20.38■□□□□ 0.85
SND1-203ENST00000463020 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
SND1-203ENST00000463020 HTTP42858 3142 aa20.36■□□□□ 0.85
SND1-203ENST00000463020 PCCAP05165 728 aaPredicted RBP20.35■□□□□ 0.85
SND1-203ENST00000463020 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
SND1-203ENST00000463020 MYOZ2Q9NPC6 264 aa20.35■□□□□ 0.85
SND1-203ENST00000463020 PDE4DIPQ5VU43 2346 aa20.35■□□□□ 0.85
SND1-203ENST00000463020 PAPPA2Q9BXP8 1791 aa20.34■□□□□ 0.85
SND1-203ENST00000463020 GOLGA2Q08379 1002 aa20.34■□□□□ 0.85
SND1-203ENST00000463020 WDR43Q15061 677 aaKnown RBP eCLIP20.34■□□□□ 0.85
SND1-203ENST00000463020 NBPF9Q3BBW0 867 aa20.34■□□□□ 0.85
SND1-203ENST00000463020 AGBL3Q8NEM8 1001 aa20.34■□□□□ 0.85
SND1-203ENST00000463020 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.85
SND1-203ENST00000463020 SPEF2Q9C093 1822 aa20.33■□□□□ 0.85
SND1-203ENST00000463020 PDE8AO60658 829 aa20.33■□□□□ 0.85
SND1-203ENST00000463020 CCDC152Q4G0S7 254 aa20.33■□□□□ 0.85
SND1-203ENST00000463020 XDHP47989 1333 aa20.32■□□□□ 0.84
SND1-203ENST00000463020 G3V3G9 751 aa20.32■□□□□ 0.84
SND1-203ENST00000463020 UBE2Q2LH0YL09 131 aa20.32■□□□□ 0.84
SND1-203ENST00000463020 USP17L8P0C7I0 530 aa20.32■□□□□ 0.84
SND1-203ENST00000463020 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
SND1-203ENST00000463020 CCDC191Q8NCU4 936 aa20.32■□□□□ 0.84
SND1-203ENST00000463020 CWC25Q9NXE8 425 aaPredicted RBP20.32■□□□□ 0.84
SND1-203ENST00000463020 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
SND1-203ENST00000463020 CTU1Q7Z7A3 348 aaKnown RBP20.31■□□□□ 0.84
SND1-203ENST00000463020 TXNRD3Q86VQ6 643 aa20.31■□□□□ 0.84
SND1-203ENST00000463020 TSPYL6Q8N831 410 aa20.31■□□□□ 0.84
SND1-203ENST00000463020 METTL22Q9BUU2 404 aaPredicted RBP20.31■□□□□ 0.84
SND1-203ENST00000463020 USP17L3A6NCW0 530 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 USP17L4A6NCW7 530 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 APAF1O14727 1248 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 TBC1D8O95759 1140 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 KLRK1P26718 216 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 USP17L1Q7RTZ2 530 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 GREM2Q9H772 168 aa20.3■□□□□ 0.84
SND1-203ENST00000463020 MKI67P46013 3256 aaKnown RBP20.29■□□□□ 0.84
SND1-203ENST00000463020 CTSWP56202 376 aa20.29■□□□□ 0.84
SND1-203ENST00000463020 MKRN3Q13064 507 aaKnown RBP20.29■□□□□ 0.84
SND1-203ENST00000463020 DACT2Q5SW24 774 aa20.29■□□□□ 0.84
SND1-203ENST00000463020 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
SND1-203ENST00000463020 MINPP1Q9UNW1 487 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms