RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 JDP2Q8WYK2 163 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 PSMD1Q99460 953 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 VPS33BQ9H267 617 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 GGA1Q9UJY5 639 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 SUPT16HQ9Y5B9 1047 aaKnown RBP7.93□□□□□ -1.14
SF3B1-206ENST00000462613 XDHP47989 1333 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 MROH5Q6ZUA9 1318 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 UFL1O94874 794 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 NEFLP07196 543 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 OS9Q13438 667 aaPredicted RBP7.92□□□□□ -1.14
SF3B1-206ENST00000462613 MTX1Q13505 466 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 HSP90AB4PQ58FF6 505 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 METTL24Q5JXM2 366 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 RPAP2Q8IXW5 612 aaPredicted RBP7.92□□□□□ -1.14
SF3B1-206ENST00000462613 ANKRD44Q8N8A2 993 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 C7orf43Q8WVR3 580 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 KAZALD1Q96I82 304 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 ZC3H12CQ9C0D7 883 aaKnown RBP7.92□□□□□ -1.14
SF3B1-206ENST00000462613 RNF181Q9P0P0 153 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 LEMD3Q9Y2U8 911 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 ZC3H4Q9UPT8 1303 aaKnown RBP7.92□□□□□ -1.14
SF3B1-206ENST00000462613 LTBP1Q14766 1721 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 PSME4Q14997 1843 aa7.92□□□□□ -1.14
SF3B1-206ENST00000462613 PPIP5K2O43314 1243 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 IARSP41252 1262 aaKnown RBP7.91□□□□□ -1.14
SF3B1-206ENST00000462613 RASSF7Q02833 373 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 CHRNDQ07001 517 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 G3BP1Q13283 466 aaKnown RBP eCLIP7.91□□□□□ -1.14
SF3B1-206ENST00000462613 WASHC4Q2M389 1173 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 NIM1KQ8IY84 436 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 ZNF594Q96JF6 807 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-206ENST00000462613 ZBTB40Q9NUA8 1239 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 PODXL2Q9NZ53 605 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 CEP126Q9P2H0 1117 aa7.91□□□□□ -1.14
SF3B1-206ENST00000462613 ZBTB47Q9UFB7 747 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-206ENST00000462613 EYA2O00167 538 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 NFKBIEO00221 500 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 CIAO1O76071 339 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 IL15P40933 162 aaPredicted RBP7.9□□□□□ -1.14
SF3B1-206ENST00000462613 EIF6P56537 245 aaKnown RBP7.9□□□□□ -1.14
SF3B1-206ENST00000462613 GPSM2P81274 684 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 ATP8B2P98198 1209 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 C20orf194Q5TEA3 1177 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 C9orf131Q5VYM1 1079 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 DPY19L2Q6NUT2 758 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 VPS37DQ86XT2 251 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 ERC1Q8IUD2 1116 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 RTFDC1Q9BY42 306 aaPredicted RBP7.9□□□□□ -1.14
SF3B1-206ENST00000462613 SIL1Q9H173 461 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 C1orf115Q9H7X2 142 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 COPRSQ9NQ92 184 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 MINPP1Q9UNW1 487 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 SRCAPQ6ZRS2 3230 aa7.9□□□□□ -1.14
SF3B1-206ENST00000462613 ARAP2Q8WZ64 1704 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 MED23Q9ULK4 1368 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 ZNF804BA4D1E1 1349 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 KDM2BQ8NHM5 1336 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 SURF6O75683 361 aaKnown RBP7.89□□□□□ -1.15
SF3B1-206ENST00000462613 IFIT1P09914 478 aaKnown RBP7.89□□□□□ -1.15
SF3B1-206ENST00000462613 SLC5A1P13866 664 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 PTPN12Q05209 780 aaKnown RBP7.89□□□□□ -1.15
SF3B1-206ENST00000462613 KIAA2012Q0VF49 1180 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 UBE4AQ14139 1066 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 PUM3Q15397 648 aaKnown RBP7.89□□□□□ -1.15
SF3B1-206ENST00000462613 CAVIN4Q5BKX8 364 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 CEP85Q6P2H3 762 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 OLFM4Q6UX06 510 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 ZNF804AQ7Z570 1209 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 TBC1D16Q8TBP0 767 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 SSH3Q8TE77 659 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 CRBNQ96SW2 442 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 ZNF277Q9NRM2 450 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-206ENST00000462613 SCN4AP35499 1836 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 COL4A1P02462 1669 aa7.89□□□□□ -1.15
SF3B1-206ENST00000462613 PNMA6EA0A0J9YXQ4 647 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 RIMBP2O15034 1052 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 FRAT2O75474 233 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-206ENST00000462613 PDE8BO95263 885 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 YY1P25490 414 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 AOC3Q16853 763 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 KLHDC4Q8TBB5 520 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 POLLQ9UGP5 575 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 RIPOR2Q9Y4F9 1068 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 DUOX1Q9NRD9 1551 aa7.88□□□□□ -1.15
SF3B1-206ENST00000462613 SNED1Q8TER0 1413 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 TAF5LO75529 589 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 RFX5P48382 616 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-206ENST00000462613 POLA2Q14181 598 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 TNIP1Q15025 636 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 LRRC24Q50LG9 513 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 GORABQ5T7V8 394 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 PODNQ7Z5L7 613 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 HELBQ8NG08 1087 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-206ENST00000462613 LPIN2Q92539 896 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 PUS3Q9BZE2 481 aaKnown RBP7.87□□□□□ -1.15
SF3B1-206ENST00000462613 COA1Q9GZY4 146 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 GNL3LQ9NVN8 582 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms