RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 FOXO4P98177 505 aa11.96□□□□□ -0.49
PKP4-208ENST00000462335 AOC3Q16853 763 aa11.96□□□□□ -0.49
PKP4-208ENST00000462335 INTS3Q68E01 1043 aaKnown RBP11.96□□□□□ -0.49
PKP4-208ENST00000462335 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.49
PKP4-208ENST00000462335 GJA3Q9Y6H8 435 aa11.96□□□□□ -0.49
PKP4-208ENST00000462335 GLTPD2A6NH11 291 aa11.95□□□□□ -0.5
PKP4-208ENST00000462335 GNAI2P04899 355 aa11.95□□□□□ -0.5
PKP4-208ENST00000462335 TNIP1Q15025 636 aa11.95□□□□□ -0.5
PKP4-208ENST00000462335 TAF1P21675 1872 aa11.95□□□□□ -0.5
PKP4-208ENST00000462335 UTRNP46939 3433 aa11.95□□□□□ -0.5
PKP4-208ENST00000462335 UTYO14607 1347 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 SBF1O95248 1867 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 FER1L6Q2WGJ9 1857 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 VEGFAP15692 232 aaPredicted RBP11.94□□□□□ -0.5
PKP4-208ENST00000462335 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
PKP4-208ENST00000462335 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 TBC1D16Q8TBP0 767 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 RRAGCQ9HB90 399 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 ZNRF3Q9ULT6 936 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
PKP4-208ENST00000462335 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
PKP4-208ENST00000462335 KIAA2012Q0VF49 1180 aa11.93□□□□□ -0.5
PKP4-208ENST00000462335 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
PKP4-208ENST00000462335 METTL24Q5JXM2 366 aa11.93□□□□□ -0.5
PKP4-208ENST00000462335 EPHA10Q5JZY3 1008 aa11.93□□□□□ -0.5
PKP4-208ENST00000462335 FBXW7Q969H0 707 aa11.93□□□□□ -0.5
PKP4-208ENST00000462335 ZNF594Q96JF6 807 aaPredicted RBP11.93□□□□□ -0.5
PKP4-208ENST00000462335 MEIS3Q99687 375 aa11.93□□□□□ -0.5
PKP4-208ENST00000462335 RTFDC1Q9BY42 306 aaPredicted RBP11.93□□□□□ -0.5
PKP4-208ENST00000462335 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
PKP4-208ENST00000462335 CHRNDQ07001 517 aa11.92□□□□□ -0.5
PKP4-208ENST00000462335 VPS37DQ86XT2 251 aa11.92□□□□□ -0.5
PKP4-208ENST00000462335 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
PKP4-208ENST00000462335 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
PKP4-208ENST00000462335 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
PKP4-208ENST00000462335 ZNF804BA4D1E1 1349 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 MROH5Q6ZUA9 1318 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 SRGAP3O43295 1099 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 FRAT2O75474 233 aaPredicted RBP11.91□□□□□ -0.5
PKP4-208ENST00000462335 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
PKP4-208ENST00000462335 OS9Q13438 667 aaPredicted RBP11.91□□□□□ -0.5
PKP4-208ENST00000462335 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 GPC2Q8N158 579 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
PKP4-208ENST00000462335 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 DBNDD1Q9H9R9 158 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
PKP4-208ENST00000462335 FZD9O00144 591 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 ECE2O60344 883 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 TAF5LO75529 589 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 RAD17O75943 681 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 PRELPP51888 382 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 G3BP1Q13283 466 aaKnown RBP eCLIP11.9□□□□□ -0.5
PKP4-208ENST00000462335 RABL6Q3YEC7 729 aaPredicted RBP11.9□□□□□ -0.5
PKP4-208ENST00000462335 GPR101Q96P66 508 aaPredicted RBP11.9□□□□□ -0.5
PKP4-208ENST00000462335 SIL1Q9H173 461 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 NMRK2Q9NPI5 230 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 TNNQ9UQP3 1299 aa11.9□□□□□ -0.5
PKP4-208ENST00000462335 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.51
PKP4-208ENST00000462335 SPEF2Q9C093 1822 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 H7C1D1 291 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
PKP4-208ENST00000462335 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 ZNF804AQ7Z570 1209 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 KAZALD1Q96I82 304 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 HACL1Q9UJ83 578 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
PKP4-208ENST00000462335 IFIT1P09914 478 aaKnown RBP11.88□□□□□ -0.51
PKP4-208ENST00000462335 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
PKP4-208ENST00000462335 SLC51AQ86UW1 340 aa11.88□□□□□ -0.51
PKP4-208ENST00000462335 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
PKP4-208ENST00000462335 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
PKP4-208ENST00000462335 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 EYA2O00167 538 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 TOMM70O94826 608 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 SLC5A1P13866 664 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 CXCL9Q07325 125 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 UBE4AQ14139 1066 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 PDE3AQ14432 1141 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
PKP4-208ENST00000462335 PNMA8AQ86V59 439 aaPredicted RBP11.87□□□□□ -0.51
PKP4-208ENST00000462335 PUS3Q9BZE2 481 aaKnown RBP11.87□□□□□ -0.51
PKP4-208ENST00000462335 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
PKP4-208ENST00000462335 USP17L3A6NCW0 530 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 USP17L4A6NCW7 530 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 ZBTB7BO15156 539 aaPredicted RBP11.86□□□□□ -0.51
PKP4-208ENST00000462335 HMMRO75330 724 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 RLBP1P12271 317 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 IL15P40933 162 aaPredicted RBP11.86□□□□□ -0.51
PKP4-208ENST00000462335 LRRC24Q50LG9 513 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 GORABQ5T7V8 394 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 USP17L1Q7RTZ2 530 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 OGFOD1Q8N543 542 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 C1orf115Q9H7X2 142 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 RIPOR2Q9Y4F9 1068 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms