RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TNIP1Q15025 636 aa11.76□□□□□ -0.53
BRCA1-207ENST00000461798 CCDC152Q4G0S7 254 aa11.76□□□□□ -0.53
BRCA1-207ENST00000461798 CIAPIN1Q6FI81 312 aa11.76□□□□□ -0.53
BRCA1-207ENST00000461798 G2E3Q7L622 706 aa11.76□□□□□ -0.53
BRCA1-207ENST00000461798 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
BRCA1-207ENST00000461798 GPRC5DQ9NZD1 345 aa11.76□□□□□ -0.53
BRCA1-207ENST00000461798 NSFL1CQ9UNZ2 370 aaKnown RBP11.76□□□□□ -0.53
BRCA1-207ENST00000461798 LAMB2P55268 1798 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 TMEM88BA6NKF7 163 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 GPSM2P81274 684 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 NEXNQ0ZGT2 675 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 MAP1SQ66K74 1059 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-207ENST00000461798 PHF12Q96QT6 1004 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 ADARB2Q9NS39 739 aaKnown RBP11.75□□□□□ -0.53
BRCA1-207ENST00000461798 POLLQ9UGP5 575 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 FANCIQ9NVI1 1328 aa11.75□□□□□ -0.53
BRCA1-207ENST00000461798 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
BRCA1-207ENST00000461798 ADAMTSL1Q8N6G6 1762 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 YDJCA8MPS7 323 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 H7C1W4 665 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-207ENST00000461798 EYA3Q99504 573 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 PGAP2Q9UHJ9 254 aa11.74□□□□□ -0.53
BRCA1-207ENST00000461798 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
BRCA1-207ENST00000461798 RAD17O75943 681 aa11.73□□□□□ -0.53
BRCA1-207ENST00000461798 GMPSP49915 693 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-207ENST00000461798 EXOSC9Q06265 439 aaKnown RBP11.73□□□□□ -0.53
BRCA1-207ENST00000461798 FLIIQ13045 1269 aa11.73□□□□□ -0.53
BRCA1-207ENST00000461798 TTLL11Q8NHH1 800 aa11.73□□□□□ -0.53
BRCA1-207ENST00000461798 DPF2Q92785 391 aa11.73□□□□□ -0.53
BRCA1-207ENST00000461798 DUOX1Q9NRD9 1551 aa11.73□□□□□ -0.53
BRCA1-207ENST00000461798 LRRC37AA6NMS7 1700 aa11.72□□□□□ -0.53
BRCA1-207ENST00000461798 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
BRCA1-207ENST00000461798 CNTNAP1P78357 1384 aa11.72□□□□□ -0.53
BRCA1-207ENST00000461798 RTL9Q8NET4 1388 aa11.72□□□□□ -0.53
BRCA1-207ENST00000461798 ZC3H15Q8WU90 426 aaKnown RBP11.72□□□□□ -0.53
BRCA1-207ENST00000461798 PLA2G12BQ9BX93 195 aa11.72□□□□□ -0.53
BRCA1-207ENST00000461798 ZC3H12CQ9C0D7 883 aaKnown RBP11.72□□□□□ -0.53
BRCA1-207ENST00000461798 MYH16Q9H6N6 1097 aa11.72□□□□□ -0.53
BRCA1-207ENST00000461798 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-207ENST00000461798 RASSF10A6NK89 507 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 HIRAP54198 1017 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-207ENST00000461798 CASP7P55210 303 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 CTSWP56202 376 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 GCKRQ14397 625 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 CWF19L2Q2TBE0 894 aaKnown RBP11.71□□□□□ -0.53
BRCA1-207ENST00000461798 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 FAM9BQ8IZU0 186 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 CDC5LQ99459 802 aaKnown RBP11.71□□□□□ -0.53
BRCA1-207ENST00000461798 BCL2L13Q9BXK5 485 aa11.71□□□□□ -0.53
BRCA1-207ENST00000461798 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
BRCA1-207ENST00000461798 CNOT7Q9UIV1 285 aaKnown RBP11.71□□□□□ -0.53
BRCA1-207ENST00000461798 COL4A1P02462 1669 aa11.71□□□□□ -0.54
BRCA1-207ENST00000461798 TAF1P21675 1872 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 XDHP47989 1333 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 ZNF521Q96K83 1311 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 H7C1D1 291 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 PSMD14O00487 310 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 ECE2O60344 883 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 CSF1RP07333 972 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 RPS12P25398 132 aaKnown RBP11.7□□□□□ -0.54
BRCA1-207ENST00000461798 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-207ENST00000461798 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-207ENST00000461798 DBNDD1Q9H9R9 158 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-207ENST00000461798 ANKIB1Q9P2G1 1089 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
BRCA1-207ENST00000461798 UFL1O94874 794 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 VIL1P09327 827 aaKnown RBP11.69□□□□□ -0.54
BRCA1-207ENST00000461798 HSPA1AP0DMV8 641 aaKnown RBP11.69□□□□□ -0.54
BRCA1-207ENST00000461798 HSPA1BP0DMV9 641 aaKnown RBP11.69□□□□□ -0.54
BRCA1-207ENST00000461798 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 VEGFBP49765 207 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 DEFB115Q30KQ5 88 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 UBE3BQ7Z3V4 1068 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 GREM2Q9H772 168 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 KCNQ5Q9NR82 932 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
BRCA1-207ENST00000461798 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
BRCA1-207ENST00000461798 CST9Q5W186 159 aa11.68□□□□□ -0.54
BRCA1-207ENST00000461798 PODNQ7Z5L7 613 aa11.68□□□□□ -0.54
BRCA1-207ENST00000461798 TRPM4Q8TD43 1214 aa11.68□□□□□ -0.54
BRCA1-207ENST00000461798 GPR101Q96P66 508 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-207ENST00000461798 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
BRCA1-207ENST00000461798 TRAF5O00463 557 aa11.67□□□□□ -0.54
BRCA1-207ENST00000461798 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
BRCA1-207ENST00000461798 COL13A1Q5TAT6 717 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-207ENST00000461798 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
BRCA1-207ENST00000461798 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
BRCA1-207ENST00000461798 ZNF609O15014 1411 aa11.67□□□□□ -0.54
BRCA1-207ENST00000461798 SHTN1A0MZ66 631 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms