RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 MAP3K5Q99683 1374 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 KIF2AO00139 706 aaPredicted RBP18.18■□□□□ 0.5
SSR4-206ENST00000460616 PSMA5P28066 241 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 CREB3L3Q68CJ9 461 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 CYP2C19P33261 490 aa18.17■□□□□ 0.5
SSR4-206ENST00000460616 RBM8AQ9Y5S9 174 aaKnown RBP18.17■□□□□ 0.5
SSR4-206ENST00000460616 KDRP35968 1356 aa18.17■□□□□ 0.5
SSR4-206ENST00000460616 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
SSR4-206ENST00000460616 BECN2A8MW95 431 aa18.17■□□□□ 0.5
SSR4-206ENST00000460616 HTATSF1O43719 755 aaKnown RBP18.17■□□□□ 0.5
SSR4-206ENST00000460616 CSB-PGBD3P0DP91 1061 aa18.17■□□□□ 0.5
SSR4-206ENST00000460616 C11orf57Q6ZUT1 292 aaPredicted RBP18.17■□□□□ 0.5
SSR4-206ENST00000460616 ANKRD1Q15327 319 aa18.16■□□□□ 0.5
SSR4-206ENST00000460616 HSP90AB4PQ58FF6 505 aa18.16■□□□□ 0.5
SSR4-206ENST00000460616 KCND1Q9NSA2 647 aa18.16■□□□□ 0.5
SSR4-206ENST00000460616 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
SSR4-206ENST00000460616 H2AFXP16104 143 aaPredicted RBP18.16■□□□□ 0.5
SSR4-206ENST00000460616 ERCC6LQ2NKX8 1250 aa18.16■□□□□ 0.5
SSR4-206ENST00000460616 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
SSR4-206ENST00000460616 CAPN2P17655 700 aa18.15■□□□□ 0.5
SSR4-206ENST00000460616 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
SSR4-206ENST00000460616 STX1AQ16623 288 aa18.15■□□□□ 0.5
SSR4-206ENST00000460616 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
SSR4-206ENST00000460616 FHOD1Q9Y613 1164 aa18.15■□□□□ 0.5
SSR4-206ENST00000460616 HNRNPH2P55795 449 aaKnown RBP18.14■□□□□ 0.5
SSR4-206ENST00000460616 BLOC1S2Q6QNY1 142 aa18.14■□□□□ 0.5
SSR4-206ENST00000460616 MAP4K1Q92918 833 aa18.14■□□□□ 0.5
SSR4-206ENST00000460616 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.5
SSR4-206ENST00000460616 GIGYF1O75420 1035 aaPredicted RBP18.14■□□□□ 0.49
SSR4-206ENST00000460616 SNW1Q13573 536 aaKnown RBP18.14■□□□□ 0.49
SSR4-206ENST00000460616 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
SSR4-206ENST00000460616 L2HGDHQ9H9P8 463 aa18.14■□□□□ 0.49
SSR4-206ENST00000460616 ECHDC1Q9NTX5 307 aa18.14■□□□□ 0.49
SSR4-206ENST00000460616 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
SSR4-206ENST00000460616 SLC27A2O14975 620 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 CTAGE5O15320 804 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
SSR4-206ENST00000460616 STK3Q13188 491 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 CLASRPQ8N2M8 674 aaKnown RBP18.13■□□□□ 0.49
SSR4-206ENST00000460616 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 SPATA31A6Q5VVP1 1343 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 EVI5LQ96CN4 794 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 PHAXQ9H814 394 aaKnown RBP18.13■□□□□ 0.49
SSR4-206ENST00000460616 CFAP45Q9UL16 551 aa18.13■□□□□ 0.49
SSR4-206ENST00000460616 CLCN6P51797 869 aa18.12■□□□□ 0.49
SSR4-206ENST00000460616 GSDMDP57764 484 aa18.12■□□□□ 0.49
SSR4-206ENST00000460616 TOM1L2Q6ZVM7 507 aa18.12■□□□□ 0.49
SSR4-206ENST00000460616 DHX40Q8IX18 779 aaKnown RBP18.12■□□□□ 0.49
SSR4-206ENST00000460616 NWD2Q9ULI1 1742 aa18.12■□□□□ 0.49
SSR4-206ENST00000460616 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 RPS6KB1P23443 525 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 EVA1CP58658 441 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 GPATCH3Q96I76 525 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 TRERF1Q96PN7 1200 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 TSPYL1Q9H0U9 437 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 ALDH8A1Q9H2A2 487 aaPredicted RBP18.11■□□□□ 0.49
SSR4-206ENST00000460616 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.11■□□□□ 0.49
SSR4-206ENST00000460616 MEGF6O75095 1541 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
SSR4-206ENST00000460616 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
SSR4-206ENST00000460616 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
SSR4-206ENST00000460616 TOB2Q14106 344 aaPredicted RBP18.11■□□□□ 0.49
SSR4-206ENST00000460616 CCDC93Q567U6 631 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 FAM227BQ96M60 508 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 SLIT2O94813 1529 aa18.11■□□□□ 0.49
SSR4-206ENST00000460616 RESTQ13127 1097 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 SYT10Q6XYQ8 523 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 H3BQV1 296 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 IFIT2P09913 472 aaKnown RBP18.1■□□□□ 0.49
SSR4-206ENST00000460616 PLA2G4AP47712 749 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 CEBPZQ03701 1054 aaKnown RBP18.1■□□□□ 0.49
SSR4-206ENST00000460616 ARHGAP29Q52LW3 1261 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 E4F1Q66K89 784 aaPredicted RBP18.1■□□□□ 0.49
SSR4-206ENST00000460616 CCAR1Q8IX12 1150 aaKnown RBP18.1■□□□□ 0.49
SSR4-206ENST00000460616 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
SSR4-206ENST00000460616 ANO10Q9NW15 660 aa18.1■□□□□ 0.49
SSR4-206ENST00000460616 TEX35Q5T0J7 233 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 LRRN4CLQ8ND94 238 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
SSR4-206ENST00000460616 PLCD3Q8N3E9 789 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 BRF1Q92994 677 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
SSR4-206ENST00000460616 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 OSBPL5Q9H0X9 879 aaPredicted RBP18.09■□□□□ 0.49
SSR4-206ENST00000460616 IMPACTQ9P2X3 320 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.09■□□□□ 0.49
SSR4-206ENST00000460616 ADCY9O60503 1353 aa18.09■□□□□ 0.49
SSR4-206ENST00000460616 HIP1O00291 1037 aa18.08■□□□□ 0.49
SSR4-206ENST00000460616 JAK2O60674 1132 aa18.08■□□□□ 0.49
SSR4-206ENST00000460616 FBXO41Q8TF61 875 aa18.08■□□□□ 0.49
SSR4-206ENST00000460616 NGLY1Q96IV0 654 aa18.08■□□□□ 0.49
SSR4-206ENST00000460616 A0A087WWV3 80 aa18.08■□□□□ 0.48
SSR4-206ENST00000460616 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
SSR4-206ENST00000460616 ARGLU1Q9NWB6 273 aaPredicted RBP18.08■□□□□ 0.48
SSR4-206ENST00000460616 TMCO3Q6UWJ1 677 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms