RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 RTFDC1Q9BY42 306 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-213ENST00000460211 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
ATG4B-213ENST00000460211 NSFL1CQ9UNZ2 370 aaKnown RBP18.9■□□□□ 0.62
ATG4B-213ENST00000460211 DDX60Q8IY21 1712 aaKnown RBP18.9■□□□□ 0.62
ATG4B-213ENST00000460211 SNED1Q8TER0 1413 aa18.9■□□□□ 0.62
ATG4B-213ENST00000460211 LAMB2P55268 1798 aa18.89■□□□□ 0.61
ATG4B-213ENST00000460211 RASSF10A6NK89 507 aa18.89■□□□□ 0.61
ATG4B-213ENST00000460211 GRM8O00222 908 aa18.89■□□□□ 0.61
ATG4B-213ENST00000460211 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.61
ATG4B-213ENST00000460211 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
ATG4B-213ENST00000460211 CASP7P55210 303 aa18.88■□□□□ 0.61
ATG4B-213ENST00000460211 EIF6P56537 245 aaKnown RBP18.88■□□□□ 0.61
ATG4B-213ENST00000460211 NIM1KQ8IY84 436 aa18.88■□□□□ 0.61
ATG4B-213ENST00000460211 WDR33Q9C0J8 1336 aaKnown RBP18.88■□□□□ 0.61
ATG4B-213ENST00000460211 LMOD1P29536 600 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-213ENST00000460211 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
ATG4B-213ENST00000460211 GREM2Q9H772 168 aa18.87■□□□□ 0.61
ATG4B-213ENST00000460211 ZBED9Q6R2W3 1325 aa18.86■□□□□ 0.61
ATG4B-213ENST00000460211 C6orf229H3BNL8 230 aa18.86■□□□□ 0.61
ATG4B-213ENST00000460211 CSF1RP07333 972 aa18.86■□□□□ 0.61
ATG4B-213ENST00000460211 HSPA8P11142 646 aaKnown RBP18.86■□□□□ 0.61
ATG4B-213ENST00000460211 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
ATG4B-213ENST00000460211 RARSP54136 660 aaKnown RBP18.86■□□□□ 0.61
ATG4B-213ENST00000460211 BRPF1P55201 1214 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-213ENST00000460211 GRM1Q13255 1194 aa18.86■□□□□ 0.61
ATG4B-213ENST00000460211 AOC3Q16853 763 aa18.86■□□□□ 0.61
ATG4B-213ENST00000460211 PAXIP1Q6ZW49 1069 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-213ENST00000460211 EYA3Q99504 573 aa18.86■□□□□ 0.61
ATG4B-213ENST00000460211 API5Q9BZZ5 524 aaKnown RBP18.86■□□□□ 0.61
ATG4B-213ENST00000460211 ANKIB1Q9P2G1 1089 aa18.86■□□□□ 0.61
ATG4B-213ENST00000460211 EPS15P42566 896 aa18.85■□□□□ 0.61
ATG4B-213ENST00000460211 GPSM2P81274 684 aa18.85■□□□□ 0.61
ATG4B-213ENST00000460211 KIAA2012Q0VF49 1180 aa18.85■□□□□ 0.61
ATG4B-213ENST00000460211 WASHC4Q2M389 1173 aa18.85■□□□□ 0.61
ATG4B-213ENST00000460211 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-213ENST00000460211 NOB1Q9ULX3 412 aaKnown RBP18.85■□□□□ 0.61
ATG4B-213ENST00000460211 KIF16BQ96L93 1317 aa18.84■□□□□ 0.61
ATG4B-213ENST00000460211 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
ATG4B-213ENST00000460211 ITGA6P23229 1130 aa18.84■□□□□ 0.61
ATG4B-213ENST00000460211 MPHOSPH8Q99549 860 aa18.84■□□□□ 0.61
ATG4B-213ENST00000460211 PODXL2Q9NZ53 605 aa18.84■□□□□ 0.61
ATG4B-213ENST00000460211 CHMP3Q9Y3E7 222 aa18.84■□□□□ 0.61
ATG4B-213ENST00000460211 IPO8O15397 1037 aaKnown RBP18.83■□□□□ 0.6
ATG4B-213ENST00000460211 CCT4P50991 539 aaKnown RBP18.83■□□□□ 0.6
ATG4B-213ENST00000460211 SCNN1DP51172 638 aa18.83■□□□□ 0.6
ATG4B-213ENST00000460211 MAP2K1Q02750 393 aaPredicted RBP18.83■□□□□ 0.6
ATG4B-213ENST00000460211 IFIT5Q13325 482 aaKnown RBP18.83■□□□□ 0.6
ATG4B-213ENST00000460211 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
ATG4B-213ENST00000460211 GGA1Q9UJY5 639 aa18.83■□□□□ 0.6
ATG4B-213ENST00000460211 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.6
ATG4B-213ENST00000460211 XDHP47989 1333 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 TRAF5O00463 557 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 FOXO4P98177 505 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 CCDC57Q2TAC2 916 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 TBC1D16Q8TBP0 767 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 ARHGAP45Q92619 1136 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 ABHD8Q96I13 439 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 ZC3H12CQ9C0D7 883 aaKnown RBP18.82■□□□□ 0.6
ATG4B-213ENST00000460211 POLLQ9UGP5 575 aa18.82■□□□□ 0.6
ATG4B-213ENST00000460211 G3V3G9 751 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 UFL1O94874 794 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 ATP2B4P23634 1241 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 DCAF8Q5TAQ9 597 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 CYP4F22Q6NT55 531 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 LMBR1LQ6UX01 489 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 CAPNS2Q96L46 248 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 TAF1P21675 1872 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 TRPM7Q96QT4 1865 aa18.81■□□□□ 0.6
ATG4B-213ENST00000460211 UTYO14607 1347 aa18.8■□□□□ 0.6
ATG4B-213ENST00000460211 RIMBP2O15034 1052 aa18.8■□□□□ 0.6
ATG4B-213ENST00000460211 ANKRD2Q9GZV1 360 aa18.8■□□□□ 0.6
ATG4B-213ENST00000460211 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
ATG4B-213ENST00000460211 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
ATG4B-213ENST00000460211 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-213ENST00000460211 TNIP1Q15025 636 aa18.79■□□□□ 0.6
ATG4B-213ENST00000460211 CST9Q5W186 159 aa18.79■□□□□ 0.6
ATG4B-213ENST00000460211 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
ATG4B-213ENST00000460211 GPR101Q96P66 508 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-213ENST00000460211 THSD7BQ9C0I4 1608 aa18.78■□□□□ 0.6
ATG4B-213ENST00000460211 CIAPIN1Q6FI81 312 aa18.78■□□□□ 0.6
ATG4B-213ENST00000460211 USP50Q70EL3 339 aaPredicted RBP18.78■□□□□ 0.6
ATG4B-213ENST00000460211 BEGAINQ9BUH8 593 aa18.78■□□□□ 0.6
ATG4B-213ENST00000460211 TSKSQ9UJT2 592 aa18.78■□□□□ 0.6
ATG4B-213ENST00000460211 MYH3P11055 1940 aa18.77■□□□□ 0.6
ATG4B-213ENST00000460211 ECE1P42892 770 aa18.77■□□□□ 0.6
ATG4B-213ENST00000460211 CXCL9Q07325 125 aa18.77■□□□□ 0.6
ATG4B-213ENST00000460211 EPHA10Q5JZY3 1008 aa18.77■□□□□ 0.6
ATG4B-213ENST00000460211 FRAT1Q92837 279 aaPredicted RBP18.77■□□□□ 0.6
ATG4B-213ENST00000460211 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
ATG4B-213ENST00000460211 LEMD3Q9Y2U8 911 aa18.77■□□□□ 0.6
ATG4B-213ENST00000460211 LRRC37AA6NMS7 1700 aa18.77■□□□□ 0.59
ATG4B-213ENST00000460211 AOC2O75106 756 aa18.76■□□□□ 0.59
ATG4B-213ENST00000460211 DBNDD1Q9H9R9 158 aa18.76■□□□□ 0.59
ATG4B-213ENST00000460211 CCDC85CA6NKD9 419 aa18.75■□□□□ 0.59
ATG4B-213ENST00000460211 BCAR3O75815 825 aa18.75■□□□□ 0.59
ATG4B-213ENST00000460211 RAD17O75943 681 aa18.75■□□□□ 0.59
ATG4B-213ENST00000460211 KCNJ4P48050 445 aa18.75■□□□□ 0.59
ATG4B-213ENST00000460211 DOK7Q18PE1 504 aa18.75■□□□□ 0.59
ATG4B-213ENST00000460211 LDHAL6AQ6ZMR3 332 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms