RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ZNF277Q9NRM2 450 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-206ENST00000459895 BSDC1Q9NW68 430 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-206ENST00000459895 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
COL18A1-206ENST00000459895 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
COL18A1-206ENST00000459895 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-206ENST00000459895 LMNB1P20700 586 aa16.05■□□□□ 0.16
COL18A1-206ENST00000459895 MTX1Q13505 466 aa16.05■□□□□ 0.16
COL18A1-206ENST00000459895 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
COL18A1-206ENST00000459895 GPR101Q96P66 508 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-206ENST00000459895 MYH13Q9UKX3 1938 aa16.05■□□□□ 0.16
COL18A1-206ENST00000459895 XDHP47989 1333 aa16.04■□□□□ 0.16
COL18A1-206ENST00000459895 MPNDQ8N594 471 aa16.04■□□□□ 0.16
COL18A1-206ENST00000459895 MPHOSPH8Q99549 860 aa16.04■□□□□ 0.16
COL18A1-206ENST00000459895 RTFDC1Q9BY42 306 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-206ENST00000459895 MINPP1Q9UNW1 487 aa16.04■□□□□ 0.16
COL18A1-206ENST00000459895 PNMA6EA0A0J9YXQ4 647 aa16.03■□□□□ 0.16
COL18A1-206ENST00000459895 UFL1O94874 794 aa16.03■□□□□ 0.16
COL18A1-206ENST00000459895 IARSP41252 1262 aaKnown RBP16.03■□□□□ 0.16
COL18A1-206ENST00000459895 CHRNDQ07001 517 aa16.03■□□□□ 0.16
COL18A1-206ENST00000459895 AOC3Q16853 763 aa16.03■□□□□ 0.16
COL18A1-206ENST00000459895 GRIPAP1Q4V328 841 aa16.03■□□□□ 0.16
COL18A1-206ENST00000459895 PUS3Q9BZE2 481 aaKnown RBP16.03■□□□□ 0.16
COL18A1-206ENST00000459895 TMX4Q9H1E5 349 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-206ENST00000459895 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
COL18A1-206ENST00000459895 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
COL18A1-206ENST00000459895 WDR90Q96KV7 1748 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 MED23Q9ULK4 1368 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 PTPN12Q05209 780 aaKnown RBP16.02■□□□□ 0.16
COL18A1-206ENST00000459895 LRRC24Q50LG9 513 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 CNNM1Q9NRU3 951 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 PA2G4Q9UQ80 394 aaKnown RBP16.02■□□□□ 0.16
COL18A1-206ENST00000459895 HDAC5Q9UQL6 1122 aa16.02■□□□□ 0.16
COL18A1-206ENST00000459895 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-206ENST00000459895 PPIP5K2O43314 1243 aa16.01■□□□□ 0.15
COL18A1-206ENST00000459895 CEP85Q6P2H3 762 aa16.01■□□□□ 0.15
COL18A1-206ENST00000459895 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
COL18A1-206ENST00000459895 SIL1Q9H173 461 aa16.01■□□□□ 0.15
COL18A1-206ENST00000459895 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
COL18A1-206ENST00000459895 GGA1Q9UJY5 639 aa16.01■□□□□ 0.15
COL18A1-206ENST00000459895 ZNF609O15014 1411 aa16.01■□□□□ 0.15
COL18A1-206ENST00000459895 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
COL18A1-206ENST00000459895 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
COL18A1-206ENST00000459895 KLRK1P26718 216 aa16■□□□□ 0.15
COL18A1-206ENST00000459895 KIAA2012Q0VF49 1180 aa16■□□□□ 0.15
COL18A1-206ENST00000459895 SUPT20HQ8NEM7 779 aa16■□□□□ 0.15
COL18A1-206ENST00000459895 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
COL18A1-206ENST00000459895 CRBNQ96SW2 442 aa16■□□□□ 0.15
COL18A1-206ENST00000459895 IRS2Q9Y4H2 1338 aa15.99■□□□□ 0.15
COL18A1-206ENST00000459895 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
COL18A1-206ENST00000459895 SNAP23O00161 211 aa15.99■□□□□ 0.15
COL18A1-206ENST00000459895 TAF5LO75529 589 aa15.99■□□□□ 0.15
COL18A1-206ENST00000459895 YY1P25490 414 aa15.99■□□□□ 0.15
COL18A1-206ENST00000459895 VGLL2Q8N8G2 317 aa15.99■□□□□ 0.15
COL18A1-206ENST00000459895 SUPT16HQ9Y5B9 1047 aaKnown RBP15.99■□□□□ 0.15
COL18A1-206ENST00000459895 MROH5Q6ZUA9 1318 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 EYA2O00167 538 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 POLA2Q14181 598 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 COPRSQ9NQ92 184 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 RIPOR2Q9Y4F9 1068 aa15.98■□□□□ 0.15
COL18A1-206ENST00000459895 ZNF804BA4D1E1 1349 aa15.97■□□□□ 0.15
COL18A1-206ENST00000459895 RIMBP2O15034 1052 aa15.97■□□□□ 0.15
COL18A1-206ENST00000459895 ATP2B4P23634 1241 aa15.97■□□□□ 0.15
COL18A1-206ENST00000459895 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
COL18A1-206ENST00000459895 NIM1KQ8IY84 436 aa15.97■□□□□ 0.15
COL18A1-206ENST00000459895 SSH3Q8TE77 659 aa15.97■□□□□ 0.15
COL18A1-206ENST00000459895 EYA3Q99504 573 aa15.97■□□□□ 0.15
COL18A1-206ENST00000459895 ADAMTSL1Q8N6G6 1762 aa15.96■□□□□ 0.15
COL18A1-206ENST00000459895 CIAO1O76071 339 aa15.96■□□□□ 0.15
COL18A1-206ENST00000459895 KCNJ4P48050 445 aa15.96■□□□□ 0.15
COL18A1-206ENST00000459895 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
COL18A1-206ENST00000459895 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
COL18A1-206ENST00000459895 YDJCA8MPS7 323 aa15.95■□□□□ 0.14
COL18A1-206ENST00000459895 ECE2O60344 883 aa15.95■□□□□ 0.14
COL18A1-206ENST00000459895 ATP8B2P98198 1209 aa15.95■□□□□ 0.14
COL18A1-206ENST00000459895 TXNRD3Q86VQ6 643 aa15.95■□□□□ 0.14
COL18A1-206ENST00000459895 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
COL18A1-206ENST00000459895 SCN4AP35499 1836 aa15.95■□□□□ 0.14
COL18A1-206ENST00000459895 COL1A1P02452 1464 aaPredicted RBP15.95■□□□□ 0.14
COL18A1-206ENST00000459895 FZD9O00144 591 aa15.94■□□□□ 0.14
COL18A1-206ENST00000459895 IRX6P78412 446 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-206ENST00000459895 DOK7Q18PE1 504 aa15.94■□□□□ 0.14
COL18A1-206ENST00000459895 SIRT2Q8IXJ6 389 aa15.94■□□□□ 0.14
COL18A1-206ENST00000459895 ZNF526Q8TF50 670 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-206ENST00000459895 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
COL18A1-206ENST00000459895 VPS33BQ9H267 617 aa15.94■□□□□ 0.14
COL18A1-206ENST00000459895 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
COL18A1-206ENST00000459895 FBXO3Q9UK99 471 aa15.94■□□□□ 0.14
COL18A1-206ENST00000459895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-206ENST00000459895 MAST2Q6P0Q8 1798 aa15.93■□□□□ 0.14
COL18A1-206ENST00000459895 IL15P40933 162 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-206ENST00000459895 PUM3Q15397 648 aaKnown RBP15.93■□□□□ 0.14
COL18A1-206ENST00000459895 PDE8BO95263 885 aa15.92■□□□□ 0.14
COL18A1-206ENST00000459895 FGFR2P21802 821 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms