RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 WDR63Q8IWG1 891 aa23.79■■□□□ 1.4
UBE2D4-208ENST00000454350 TRPM4Q8TD43 1214 aa23.79■■□□□ 1.4
UBE2D4-208ENST00000454350 CCDC85AQ96PX6 553 aaPredicted RBP23.79■■□□□ 1.4
UBE2D4-208ENST00000454350 ZBTB12Q9Y330 459 aaPredicted RBP23.79■■□□□ 1.4
UBE2D4-208ENST00000454350 ZNF646O15015 1829 aaPredicted RBP23.79■■□□□ 1.4
UBE2D4-208ENST00000454350 NEURL1BA8MQ27 555 aa23.78■■□□□ 1.4
UBE2D4-208ENST00000454350 BCL2L13Q9BXK5 485 aa23.78■■□□□ 1.4
UBE2D4-208ENST00000454350 SPINK5Q9NQ38 1064 aaPredicted RBP23.78■■□□□ 1.4
UBE2D4-208ENST00000454350 CNOT7Q9UIV1 285 aaKnown RBP23.78■■□□□ 1.4
UBE2D4-208ENST00000454350 ECE2O60344 883 aa23.77■■□□□ 1.4
UBE2D4-208ENST00000454350 VAMP4O75379 141 aa23.77■■□□□ 1.4
UBE2D4-208ENST00000454350 CTSWP56202 376 aa23.77■■□□□ 1.4
UBE2D4-208ENST00000454350 DOK7Q18PE1 504 aa23.77■■□□□ 1.4
UBE2D4-208ENST00000454350 TTLL11Q8NHH1 800 aa23.77■■□□□ 1.4
UBE2D4-208ENST00000454350 DPF2Q92785 391 aa23.77■■□□□ 1.4
UBE2D4-208ENST00000454350 SALL2Q9Y467 1007 aaPredicted RBP23.77■■□□□ 1.4
UBE2D4-208ENST00000454350 H7C1W4 665 aa23.76■■□□□ 1.39
UBE2D4-208ENST00000454350 DEFB115Q30KQ5 88 aa23.76■■□□□ 1.39
UBE2D4-208ENST00000454350 EYA3Q99504 573 aa23.76■■□□□ 1.39
UBE2D4-208ENST00000454350 FLIIQ13045 1269 aa23.75■■□□□ 1.39
UBE2D4-208ENST00000454350 MICALL2Q8IY33 904 aa23.75■■□□□ 1.39
UBE2D4-208ENST00000454350 ZC3H15Q8WU90 426 aaKnown RBP23.75■■□□□ 1.39
UBE2D4-208ENST00000454350 FOXN1O15353 648 aa23.74■■□□□ 1.39
UBE2D4-208ENST00000454350 UFL1O94874 794 aa23.74■■□□□ 1.39
UBE2D4-208ENST00000454350 EGFRP00533 1210 aa23.74■■□□□ 1.39
UBE2D4-208ENST00000454350 CASP7P55210 303 aa23.74■■□□□ 1.39
UBE2D4-208ENST00000454350 EXOSC9Q06265 439 aaKnown RBP23.74■■□□□ 1.39
UBE2D4-208ENST00000454350 NEXNQ0ZGT2 675 aa23.74■■□□□ 1.39
UBE2D4-208ENST00000454350 GLIS2Q9BZE0 524 aaPredicted RBP23.74■■□□□ 1.39
UBE2D4-208ENST00000454350 WTIPA6NIX2 430 aaPredicted RBP23.73■■□□□ 1.39
UBE2D4-208ENST00000454350 ANKRD18AQ8IVF6 992 aa23.73■■□□□ 1.39
UBE2D4-208ENST00000454350 GREM2Q9H772 168 aa23.73■■□□□ 1.39
UBE2D4-208ENST00000454350 WBP1LQ9NX94 342 aa23.73■■□□□ 1.39
UBE2D4-208ENST00000454350 ANKIB1Q9P2G1 1089 aa23.73■■□□□ 1.39
UBE2D4-208ENST00000454350 GGA1Q9UJY5 639 aa23.73■■□□□ 1.39
UBE2D4-208ENST00000454350 ABT1Q9ULW3 272 aaKnown RBP23.73■■□□□ 1.39
UBE2D4-208ENST00000454350 H7C1D1 291 aa23.72■■□□□ 1.39
UBE2D4-208ENST00000454350 VIL1P09327 827 aaKnown RBP23.72■■□□□ 1.39
UBE2D4-208ENST00000454350 GCKRQ14397 625 aa23.72■■□□□ 1.39
UBE2D4-208ENST00000454350 SAMD7Q7Z3H4 446 aa23.72■■□□□ 1.39
UBE2D4-208ENST00000454350 ZC3H12CQ9C0D7 883 aaKnown RBP23.72■■□□□ 1.39
UBE2D4-208ENST00000454350 TLL2Q9Y6L7 1015 aa23.72■■□□□ 1.39
UBE2D4-208ENST00000454350 WDR33Q9C0J8 1336 aaKnown RBP23.72■■□□□ 1.39
UBE2D4-208ENST00000454350 A0A1B0GUL6 1792 aa23.71■■□□□ 1.39
UBE2D4-208ENST00000454350 ZNF609O15014 1411 aa23.71■■□□□ 1.39
UBE2D4-208ENST00000454350 XDHP47989 1333 aa23.71■■□□□ 1.39
UBE2D4-208ENST00000454350 RPS12P25398 132 aaKnown RBP23.71■■□□□ 1.39
UBE2D4-208ENST00000454350 UBE3BQ7Z3V4 1068 aa23.71■■□□□ 1.39
UBE2D4-208ENST00000454350 PLA2G12BQ9BX93 195 aa23.71■■□□□ 1.39
UBE2D4-208ENST00000454350 DNAAF4Q8WXU2 420 aa23.7■■□□□ 1.38
UBE2D4-208ENST00000454350 CDC5LQ99459 802 aaKnown RBP23.7■■□□□ 1.38
UBE2D4-208ENST00000454350 BSDC1Q9NW68 430 aaPredicted RBP23.7■■□□□ 1.38
UBE2D4-208ENST00000454350 FKBP5Q13451 457 aaPredicted RBP23.69■■□□□ 1.38
UBE2D4-208ENST00000454350 MINPP1Q9UNW1 487 aa23.69■■□□□ 1.38
UBE2D4-208ENST00000454350 TBC1D10BQ4KMP7 808 aaPredicted RBP23.68■■□□□ 1.38
UBE2D4-208ENST00000454350 DLK2Q6UY11 383 aa23.68■■□□□ 1.38
UBE2D4-208ENST00000454350 CDC37L1Q7L3B6 337 aa23.68■■□□□ 1.38
UBE2D4-208ENST00000454350 FAM9BQ8IZU0 186 aa23.68■■□□□ 1.38
UBE2D4-208ENST00000454350 TNS4Q8IZW8 715 aa23.68■■□□□ 1.38
UBE2D4-208ENST00000454350 LINS1Q8NG48 757 aa23.68■■□□□ 1.38
UBE2D4-208ENST00000454350 CAPNS2Q96L46 248 aa23.68■■□□□ 1.38
UBE2D4-208ENST00000454350 CELF2O95319 508 aaKnown RBP23.67■■□□□ 1.38
UBE2D4-208ENST00000454350 CSF1RP07333 972 aa23.67■■□□□ 1.38
UBE2D4-208ENST00000454350 ATP2B4P23634 1241 aa23.67■■□□□ 1.38
UBE2D4-208ENST00000454350 CYP4F22Q6NT55 531 aa23.67■■□□□ 1.38
UBE2D4-208ENST00000454350 SAPCD2Q86UD0 394 aa23.67■■□□□ 1.38
UBE2D4-208ENST00000454350 ZNF521Q96K83 1311 aa23.66■■□□□ 1.38
UBE2D4-208ENST00000454350 GMLQ99445 158 aa23.66■■□□□ 1.38
UBE2D4-208ENST00000454350 MED23Q9ULK4 1368 aa23.65■■□□□ 1.38
UBE2D4-208ENST00000454350 USP48Q86UV5 1035 aa23.65■■□□□ 1.38
UBE2D4-208ENST00000454350 F6X3S4 739 aa23.64■■□□□ 1.37
UBE2D4-208ENST00000454350 ZNF280AP59817 542 aaPredicted RBP23.64■■□□□ 1.37
UBE2D4-208ENST00000454350 FAM161AQ3B820 660 aa23.64■■□□□ 1.37
UBE2D4-208ENST00000454350 RSBN1LQ6PCB5 846 aaPredicted RBP23.64■■□□□ 1.37
UBE2D4-208ENST00000454350 MYH16Q9H6N6 1097 aa23.64■■□□□ 1.37
UBE2D4-208ENST00000454350 PRDM10Q9NQV6 1147 aa23.64■■□□□ 1.37
UBE2D4-208ENST00000454350 ITGA6P23229 1130 aa23.63■■□□□ 1.37
UBE2D4-208ENST00000454350 CTCFP49711 727 aaPredicted RBP23.63■■□□□ 1.37
UBE2D4-208ENST00000454350 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
UBE2D4-208ENST00000454350 BEND3Q5T5X7 828 aa23.63■■□□□ 1.37
UBE2D4-208ENST00000454350 HHIPL1Q96JK4 782 aa23.63■■□□□ 1.37
UBE2D4-208ENST00000454350 ASTN2O75129 1339 aaPredicted RBP23.62■■□□□ 1.37
UBE2D4-208ENST00000454350 ECE1P42892 770 aa23.62■■□□□ 1.37
UBE2D4-208ENST00000454350 KIF4BQ2VIQ3 1234 aa23.62■■□□□ 1.37
UBE2D4-208ENST00000454350 RBM26Q5T8P6 1007 aaKnown RBP23.62■■□□□ 1.37
UBE2D4-208ENST00000454350 PODNQ7Z5L7 613 aa23.62■■□□□ 1.37
UBE2D4-208ENST00000454350 TXNRD3Q86VQ6 643 aa23.62■■□□□ 1.37
UBE2D4-208ENST00000454350 AGBL3Q8NEM8 1001 aa23.62■■□□□ 1.37
UBE2D4-208ENST00000454350 G3V3G9 751 aa23.61■■□□□ 1.37
UBE2D4-208ENST00000454350 HSPA8P11142 646 aaKnown RBP23.61■■□□□ 1.37
UBE2D4-208ENST00000454350 FOXO4P98177 505 aa23.61■■□□□ 1.37
UBE2D4-208ENST00000454350 MAP2K1Q02750 393 aaPredicted RBP23.61■■□□□ 1.37
UBE2D4-208ENST00000454350 DCAF8Q5TAQ9 597 aa23.61■■□□□ 1.37
UBE2D4-208ENST00000454350 AIDAQ96BJ3 306 aa23.61■■□□□ 1.37
UBE2D4-208ENST00000454350 AOC2O75106 756 aa23.6■■□□□ 1.37
UBE2D4-208ENST00000454350 KRT26Q7Z3Y9 468 aa23.6■■□□□ 1.37
UBE2D4-208ENST00000454350 ZNF408Q9H9D4 720 aa23.6■■□□□ 1.37
UBE2D4-208ENST00000454350 USP17L3A6NCW0 530 aa23.59■■□□□ 1.37
UBE2D4-208ENST00000454350 USP17L4A6NCW7 530 aa23.59■■□□□ 1.37
UBE2D4-208ENST00000454350 ADM5C9JUS6 153 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms