RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 NOS2P35228 1153 aa9.07□□□□□ -0.96
CSTF1-204ENST00000452950 CCDC181Q5TID7 509 aa9.07□□□□□ -0.96
CSTF1-204ENST00000452950 PI16Q6UXB8 463 aa9.07□□□□□ -0.96
CSTF1-204ENST00000452950 CCDC74AQ96AQ1 378 aa9.07□□□□□ -0.96
CSTF1-204ENST00000452950 FIGNL2A6NMB9 653 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 TTLL8A6PVC2 850 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 IL2RAP01589 272 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 EPS8L3Q8TE67 593 aaKnown RBP9.06□□□□□ -0.96
CSTF1-204ENST00000452950 ZDHHC1Q8WTX9 485 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 PHACTR1Q9C0D0 580 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 SRCIN1Q9C0H9 1055 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 ZNF408Q9H9D4 720 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 COPRSQ9NQ92 184 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 CABP1Q9NZU7 370 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 SIRPGQ9P1W8 387 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 IFT140Q96RY7 1462 aa9.06□□□□□ -0.96
CSTF1-204ENST00000452950 PPFIA3O75145 1194 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 IRS1P35568 1242 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 CNKSR1Q969H4 720 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 L3MBTL2Q969R5 705 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 SRPK1Q96SB4 655 aaKnown RBP9.05□□□□□ -0.96
CSTF1-204ENST00000452950 SPON2Q9BUD6 331 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 PCDH12Q9NPG4 1184 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 IFT57Q9NWB7 429 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 CLASP1Q7Z460 1538 aa9.05□□□□□ -0.96
CSTF1-204ENST00000452950 SPINT1O43278 529 aa9.04□□□□□ -0.96
CSTF1-204ENST00000452950 DNAJC6O75061 913 aa9.04□□□□□ -0.96
CSTF1-204ENST00000452950 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.966e-7■■■■□ 26.5
CSTF1-204ENST00000452950 USPL1Q5W0Q7 1092 aa9.04□□□□□ -0.96
CSTF1-204ENST00000452950 KIAA0825Q8IV33 1275 aa9.04□□□□□ -0.96
CSTF1-204ENST00000452950 TRIM55Q9BYV6 548 aa9.04□□□□□ -0.96
CSTF1-204ENST00000452950 KBTBD4Q9NVX7 518 aa9.04□□□□□ -0.96
CSTF1-204ENST00000452950 U2SURPO15042 1029 aaKnown RBP9.03□□□□□ -0.96
CSTF1-204ENST00000452950 VSIG8P0DPA2 414 aa9.03□□□□□ -0.96
CSTF1-204ENST00000452950 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
CSTF1-204ENST00000452950 RELBQ01201 579 aa9.03□□□□□ -0.96
CSTF1-204ENST00000452950 ZSCAN1Q8NBB4 408 aa9.03□□□□□ -0.96
CSTF1-204ENST00000452950 RNPC3Q96LT9 517 aaKnown RBP9.03□□□□□ -0.96
CSTF1-204ENST00000452950 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
CSTF1-204ENST00000452950 SPC25Q9HBM1 224 aa9.03□□□□□ -0.96
CSTF1-204ENST00000452950 TNFRSF21O75509 655 aa9.02□□□□□ -0.97
CSTF1-204ENST00000452950 NASPP49321 788 aaPredicted RBP9.02□□□□□ -0.97
CSTF1-204ENST00000452950 ANKS3Q6ZW76 656 aa9.02□□□□□ -0.97
CSTF1-204ENST00000452950 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
CSTF1-204ENST00000452950 FOXD3Q9UJU5 478 aaPredicted RBP9.02□□□□□ -0.97
CSTF1-204ENST00000452950 SUGT1Q9Y2Z0 365 aa9.02□□□□□ -0.97
CSTF1-204ENST00000452950 PPP1R12AO14974 1030 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-204ENST00000452950 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
CSTF1-204ENST00000452950 CTSOP43234 321 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-204ENST00000452950 PTSQ03393 145 aa9.01□□□□□ -0.97
CSTF1-204ENST00000452950 PLEKHG4Q58EX7 1191 aa9.01□□□□□ -0.97
CSTF1-204ENST00000452950 C1orf53Q5VUE5 145 aa9.01□□□□□ -0.97
CSTF1-204ENST00000452950 NOC4LQ9BVI4 516 aaKnown RBP9.01□□□□□ -0.97
CSTF1-204ENST00000452950 SLKQ9H2G2 1235 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-204ENST00000452950 ZNF395Q9H8N7 513 aaPredicted RBP9.01□□□□□ -0.97
CSTF1-204ENST00000452950 STRIP2Q9ULQ0 834 aa9.01□□□□□ -0.97
CSTF1-204ENST00000452950 PRKAB1Q9Y478 270 aa9.01□□□□□ -0.97
CSTF1-204ENST00000452950 HRH3Q9Y5N1 445 aa9.01□□□□□ -0.97
CSTF1-204ENST00000452950 PARP3Q9Y6F1 533 aa9.01□□□□□ -0.97
CSTF1-204ENST00000452950 PARNO95453 639 aaKnown RBP9□□□□□ -0.97
CSTF1-204ENST00000452950 PWP1Q13610 501 aa9□□□□□ -0.97
CSTF1-204ENST00000452950 NXPE4Q6UWF7 544 aa9□□□□□ -0.97
CSTF1-204ENST00000452950 INSM2Q96T92 566 aaPredicted RBP9□□□□□ -0.97
CSTF1-204ENST00000452950 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
CSTF1-204ENST00000452950 NPHS2Q9NP85 383 aa9□□□□□ -0.97
CSTF1-204ENST00000452950 SNTG2Q9NY99 539 aa9□□□□□ -0.97
CSTF1-204ENST00000452950 EFR3BQ9Y2G0 817 aa9□□□□□ -0.97
CSTF1-204ENST00000452950 PLEKHD1A6NEE1 506 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 MICAL2O94851 1124 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 ETFBP38117 255 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 RAB33AQ14088 237 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 ZNF295-AS1Q8N0V1 137 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 DEPDC7Q96QD5 511 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 BCO2Q9BYV7 579 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 TMX1Q9H3N1 280 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 ZFYVE28Q9HCC9 887 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 TTF2Q9UNY4 1162 aaKnown RBP8.99□□□□□ -0.97
CSTF1-204ENST00000452950 MRVI1Q9Y6F6 885 aa8.99□□□□□ -0.97
CSTF1-204ENST00000452950 GAPVD1Q14C86 1478 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 FAM181BA6NEQ2 426 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 KLF4O43474 513 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 GADD45BO75293 160 aaPredicted RBP8.98□□□□□ -0.97
CSTF1-204ENST00000452950 CHMP4BP1P59074 171 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 CLN3Q13286 438 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 HIF1AQ16665 826 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 XKR5Q6UX68 686 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 ZNF438Q7Z4V0 828 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
CSTF1-204ENST00000452950 ADAMTS1Q9UHI8 967 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 BCS1LQ9Y276 419 aa8.98□□□□□ -0.97
CSTF1-204ENST00000452950 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.973e-8■■■■■ 29
CSTF1-204ENST00000452950 CFTRP13569 1480 aa8.97□□□□□ -0.97
CSTF1-204ENST00000452950 PHACTR2O75167 634 aa8.97□□□□□ -0.97
CSTF1-204ENST00000452950 CDC45O75419 566 aa8.97□□□□□ -0.97
CSTF1-204ENST00000452950 CENPCQ03188 943 aa8.97□□□□□ -0.97
CSTF1-204ENST00000452950 HSP90AB2PQ58FF8 381 aa8.97□□□□□ -0.97
CSTF1-204ENST00000452950 RELL1Q8IUW5 271 aa8.97□□□□□ -0.97
CSTF1-204ENST00000452950 HNRNPLLQ8WVV9 542 aaKnown RBP8.97□□□□□ -0.97
CSTF1-204ENST00000452950 PSMD1Q99460 953 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms