RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 YEATS4O95619 227 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 CCDC150Q8NCX0 1101 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 ESR2Q92731 530 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 LGR6Q9HBX8 967 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 CGNQ9P2M7 1197 aaKnown RBP11.98□□□□□ -0.49
CTC1-202ENST00000449476 BAG3O95817 575 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 SKILP12757 684 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 RTN1Q16799 776 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 IDEP14735 1019 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 UBASH3AP57075 661 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 CEP135Q66GS9 1140 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 AEBP2Q6ZN18 517 aaPredicted RBP11.98□□□□□ -0.49
CTC1-202ENST00000449476 TSG101Q99816 390 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 CRACR2AQ9BSW2 395 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 SPTLC2O15270 562 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
CTC1-202ENST00000449476 IL2RBP14784 551 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 SLC4A8Q2Y0W8 1093 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 ZNF790Q6PG37 636 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 VAT1LQ9HCJ6 419 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 STX8Q9UNK0 236 aa11.98□□□□□ -0.49
CTC1-202ENST00000449476 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 ERICH4A6NGS2 130 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 SGSM2O43147 1006 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 AOPEPQ8N6M6 819 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 CRNKL1Q9BZJ0 848 aaKnown RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 CEP170Q5SW79 1584 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 PPP1R12BO60237 982 aaPredicted RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 FGFR1OPO95684 399 aaKnown RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 JAKMIP3Q5VZ66 844 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 CCDC12Q8WUD4 166 aaPredicted RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 ARHGEF5Q12774 1597 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 TIMM10P62072 90 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 HSP90AA4PQ58FG1 418 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 TRMT2AQ8IZ69 625 aaKnown RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 HELBQ8NG08 1087 aaPredicted RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 KLHDC4Q8TBB5 520 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 PYM1Q9BRP8 204 aaKnown RBP11.97□□□□□ -0.49
CTC1-202ENST00000449476 PAXBP1Q9Y5B6 917 aa11.97□□□□□ -0.49
CTC1-202ENST00000449476 GOLGA6L9A6NEM1 432 aa11.96□□□□□ -0.49
CTC1-202ENST00000449476 N4BP3O15049 544 aa11.96□□□□□ -0.49
CTC1-202ENST00000449476 GNG11P61952 73 aa11.96□□□□□ -0.49
CTC1-202ENST00000449476 UBA5Q9GZZ9 404 aa11.96□□□□□ -0.49
CTC1-202ENST00000449476 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.49
CTC1-202ENST00000449476 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.5
CTC1-202ENST00000449476 CALML4Q96GE6 196 aa11.96□□□□□ -0.5
CTC1-202ENST00000449476 ABCC4O15439 1325 aa11.96□□□□□ -0.5
CTC1-202ENST00000449476 AOX1Q06278 1338 aa11.96□□□□□ -0.5
CTC1-202ENST00000449476 AFMP43652 599 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 ENOX2Q16206 610 aaKnown RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 TDRD12Q587J7 1177 aaKnown RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 NBPF6Q5VWK0 638 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 NBPF5PQ86XG9 351 aaPredicted RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 NBPF4Q96M43 638 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 PLEKHG3A1L390 1219 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 USO1O60763 962 aaKnown RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 HMGB2P26583 209 aaKnown RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 AMPD3Q01432 767 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 DBNDD2Q9BQY9 259 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 BMP15O95972 392 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 ATP6V1AP38606 617 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 RBSNQ9H1K0 784 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTC1-202ENST00000449476 RTL1A6NKG5 1358 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 KIAA0232Q92628 1395 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 IRS4O14654 1257 aaPredicted RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 NAA16Q6N069 864 aaPredicted RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 ACSBG1Q96GR2 724 aa11.95□□□□□ -0.5
CTC1-202ENST00000449476 METTL22Q9BUU2 404 aaPredicted RBP11.95□□□□□ -0.5
CTC1-202ENST00000449476 ATP10AO60312 1499 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 KIAA0754O94854 1291 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 KIF20AO95235 890 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 FAM227BQ96M60 508 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 KDM5CP41229 1560 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 RPS6KB1P23443 525 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 PAFAH1B1P43034 410 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 MAP9Q49MG5 647 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 TNNI3KQ59H18 835 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 ORAI2Q96SN7 254 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 FPGT-TNNI3KV9GXZ4 949 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 ZNF521Q96K83 1311 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 EYA2O00167 538 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 SLC27A2O14975 620 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
CTC1-202ENST00000449476 CCDC129Q6ZRS4 1044 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 NLRP3Q96P20 1036 aa11.94□□□□□ -0.5
CTC1-202ENST00000449476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.93□□□□□ -0.5
CTC1-202ENST00000449476 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms