RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
SYNGAP1-204ENST00000449372 ZSCAN26Q16670 478 aa15.8■□□□□ 0.12
SYNGAP1-204ENST00000449372 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
SYNGAP1-204ENST00000449372 HYPKQ9NX55 129 aa15.8■□□□□ 0.12
SYNGAP1-204ENST00000449372 CWC15Q9P013 229 aaKnown RBP15.8■□□□□ 0.12
SYNGAP1-204ENST00000449372 UBE2HP62256 183 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 FUCA2Q9BTY2 467 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 JRKLQ9Y4A0 524 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 FHOD1Q9Y613 1164 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 ZSCAN25Q6NSZ9 544 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 KCPQ6ZWJ8 1503 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 TPM4P67936 248 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 NRBP1Q9UHY1 535 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 NUP188Q5SRE5 1749 aa15.79■□□□□ 0.12
SYNGAP1-204ENST00000449372 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 MAP3K2Q9Y2U5 619 aa15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 GPS2Q13227 327 aa15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 NOL8Q76FK4 1167 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 DRC1Q96MC2 740 aa15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 CEP83Q9Y592 693 aa15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 PDCP20941 246 aa15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 RNF20Q5VTR2 975 aa15.78■□□□□ 0.12
SYNGAP1-204ENST00000449372 PLA2G4AP47712 749 aa15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 KAZALD1Q96I82 304 aa15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 SH2B1Q9NRF2 756 aaPredicted RBP15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 COL22A1Q8NFW1 1626 aaPredicted RBP15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 SLU7O95391 586 aaKnown RBP15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 PNMA6AP0CW24 399 aaPredicted RBP15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 PTPN14Q15678 1187 aa15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 ZNF496Q96IT1 587 aaPredicted RBP15.77■□□□□ 0.12
SYNGAP1-204ENST00000449372 CCDC172P0C7W6 258 aa15.77■□□□□ 0.11
SYNGAP1-204ENST00000449372 CHMLP26374 656 aa15.77■□□□□ 0.11
SYNGAP1-204ENST00000449372 CNPY2Q9Y2B0 182 aa15.77■□□□□ 0.11
SYNGAP1-204ENST00000449372 NKX1-1Q15270 411 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 HIP1O00291 1037 aa15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 ZKSCAN1P17029 563 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 ST5P78524 1137 aa15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 AFDNP55196 1824 aaKnown RBP15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 OS9Q13438 667 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 TMEM87AQ8NBN3 555 aa15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 SMARCE1Q969G3 411 aa15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 LIMCH1Q9UPQ0 1083 aa15.76■□□□□ 0.11
SYNGAP1-204ENST00000449372 A0A1B0GUL7 405 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 CCDC192P0DO97 292 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 SRLQ86TD4 932 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 ATG3Q9NT62 314 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 H2AFXP16104 143 aaPredicted RBP15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 IGKV5-2P06315 115 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 RRP15Q9Y3B9 282 aaKnown RBP15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
SYNGAP1-204ENST00000449372 COL16A1Q07092 1604 aaPredicted RBP15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 PLCH1Q4KWH8 1693 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 ZSCAN22P10073 491 aaPredicted RBP15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 CLCN6P51797 869 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 NOM1Q5C9Z4 860 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 TRIM5Q9C035 493 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 USP42Q9H9J4 1324 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 ERCC6LQ2NKX8 1250 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 CWF19L2Q2TBE0 894 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 CCDC171Q6TFL3 1326 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 CARD10Q9BWT7 1032 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 DEF6Q9H4E7 631 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 WNK3Q9BYP7 1800 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 PSMA5P28066 241 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 TTC31Q49AM3 519 aaPredicted RBP15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 TSHZ3Q63HK5 1081 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 FAM200AQ8TCP9 573 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 CACTINQ8WUQ7 758 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
SYNGAP1-204ENST00000449372 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 TJP1Q07157 1748 aa15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 ERC1Q8IUD2 1116 aa15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 PI4K2BQ8TCG2 481 aa15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 AHDC1Q5TGY3 1603 aaPredicted RBP15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 LUZP1Q86V48 1076 aa15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 IL17RAQ96F46 866 aa15.73■□□□□ 0.11
SYNGAP1-204ENST00000449372 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 PRDM11Q9NQV5 511 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 USP27XA6NNY8 438 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 STX6O43752 255 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 ANKRD1Q15327 319 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 ROBO1Q9Y6N7 1651 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 COL15A1P39059 1388 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 RAD50Q92878 1312 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 FIBPO43427 364 aa15.72■□□□□ 0.11
SYNGAP1-204ENST00000449372 TCHHQ07283 1943 aa15.71■□□□□ 0.11
SYNGAP1-204ENST00000449372 CAVIN2O95810 425 aa15.71■□□□□ 0.11
SYNGAP1-204ENST00000449372 UNC5CLQ8IV45 518 aa15.71■□□□□ 0.11
SYNGAP1-204ENST00000449372 FBXO18Q8NFZ0 1043 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms